Array 1 57851-57358 **** Predicted by CRISPRDetect 2.4 *** >NZ_BDAQ01000011.1 Parageobacillus toebii NBRC 107807, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 57850 30 100.0 35 .............................. CAGTCGGACAGGTTGTGTATTGGAACGGTACAGCC 57785 30 100.0 37 .............................. TTTCTACTCAAATAATTGAAGATGAAATCGGGAATCA 57718 30 100.0 35 .............................. CTTGTTCTAAAGTGATTCCCTCATTTTCCAACTCT 57653 30 100.0 35 .............................. CCTCTAAAGATGTATCAGCGTACCGATCGAGGCAT 57588 30 100.0 36 .............................. TCAATTCATTGCTAAAAATCGGATTCCCTCCCGAAC 57522 30 100.0 36 .............................. TGAGAATTGGTGCGGAATGACATATGCGCTGCTACC 57456 30 100.0 38 .............................. TCTTTCAGAATACAATGCAACACCGATTGTTCAGCATT 57388 30 90.0 0 ....A............A...A........ | A [57372] ========== ====== ====== ====== ============================== ====================================== ================== 8 30 98.8 36 GTTTTTATCTTACCTATGAGGGATTGAAAC # Left flank : AACATATGGAACGAATTTTTATTTGCGGTAACGATCACAACGTCTTCCCAGCAGCCCATTATGGTCGCTTTGCAAAACTTATCCGGAAGCCAAATCGTGCAATGGAACGTGCAAATGGCAGGGGCGCTGCTTGCTGCTTTGCCAACATTGCTTGTCTATATGTTCCTCGGCAAATATTTCGTCCGTGGTTTGCTAGCTGGTTCAGTAAAAGGGTAATCATGCATGCCGGCAAAGGCGAAATGTTTGTGGAGGATCTTTTAGGAGCTGGCAGGGAGAAGAACTATTTCGATAATGCCAAAACATCTGCAGTAAGAACTTCCTGTGCCACAATCTTTGTCGTCGACCTCCAATCGTGCAAAAACTCTAGGAGATCGACGACAATTTCTTTTTGCCTCTATCCTTACAGCCATCACCGATCCACTCTATTGACGGAATTTTCAAAATGGATTATACTGGACTTGCTTTGTTTTGAAAAGTGTTGATGTAGCAACGTTTTTGGG # Right flank : TGAGCAGCAAGGTGCGCATTTTGGGCCAAAGGAAAAACAGGTCGTATCTTATCTATGAAGAATCAAAACTTTATCAATCCACTCTTTTCGGGTACTTATTGAAAAACCGCTCAACACAAAAACCCGCTGATTTTCAGCGGGTTTTATCACTGGCTTGATGCCTTATGGTACAATAAAATCGGAAATCATAGAGACGAAAGCGGGGAGAAATGCGTGTATCTTGGGGCGATTGAAGCAGGTGGAACGAAATTTGTATGCGCTGTCGGGGATCGTGACGGAAATATAAAAGAAAGAGTGACATTTCCAACGGCGACGCCGGAAGAAACGATGCGCCATGTCGTCGATTTTTTTAGCCGATATGAATTAGAGGCGATCGGCATCGGTTCTTTTGGTCCGATTGATTTGCATCCCGATAGTGCGACATATGGCTATATTACAAGCACGCCGAAACAAAAATGGGCGAATTTTAATTTTGTCGGTGAAATGAAACGGCATTTTCA # Questionable array : NO Score: 9.20 # Score Detail : 1:0, 2:3, 3:3, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTTATCTTACCTATGAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: R [matched GTTTTTATCGTACCTATGAGGAATTGAAAC with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-0.50,-1.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [4-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [55.0-65.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,10.05 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], // Array 1 14266-13980 **** Predicted by CRISPRDetect 2.4 *** >NZ_BDAQ01000014.1 Parageobacillus toebii NBRC 107807, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ========================================================================================= ================== 14265 30 100.0 38 .............................. ATGAAGAAGGGTGAAAATTATTCGTCAGTGAACTTGAG 14197 30 96.7 39 .................A............ CTTTTGTGTGAACCAAACGGTCAATCTCACGCAGATTCA 14128 30 86.7 89 .C..................A...GA.... CAAGCTAAAAAAGGTTCTATTATTGTTTTTATCGTAATTATGAAATTGAACCAGCGTTCCAACGTGATATAATGAATTGGTAACTATTT 14009 30 66.7 0 A........GCG....C...T.....CGTA | ========== ====== ====== ====== ============================== ========================================================================================= ================== 4 30 87.5 56 GTTTTTATCTTACCTATGAGGAATTGAAAC # Left flank : ACGAATTTAAAAATGAAGATAGACATCGACATTCATGATACAAAAAATGCATTACCATCAGAAGAATGAAAAACAATTTTGTCGAAGTATCTCTTTGCGGCTGGGAGAATGAGGTCGTTTCTTATCTATATAAATCCAGTTTGAAATTCCGACATGTTTAACCAACACTTGTGTCTATGCTGCTCCTAAACGAGTAAATAAGGAAGCAGATCAATGAATGAATAGTAAGTAGATAAAATATATTTCGTGTTTCCAGATTCATCATCAAAATAGGAAGAAATGTAACGATAGTGCGATCGTATATAAACTATCATTCATGGCGAAAAAATTGTCGTCGACCTCCAATCATGCAAAAAGTGCGGGGGATCGATGACACTTCTTTTTTTTCTTTTCTTCCCTACAGCCATCAGTACTTTTTTGATATTGACGCAATTTTCAAACTGACGTATACTGTATGTATCCATTATTCGCCATCCTTGATATATTAGCATTTGTTGTGG # Right flank : GTGTTCCGGCAGCTTTCCCTGCACCATGTCAATATCACGTTCTAACCGATAGGCGCATTCTCGTTTCTCTCTAGCATAATGCTAGTGGAGAAACGAGTTTTTTTTATTGCACTTTTATTGTGTGCATGTTCTAATAGTGATTGATGGGAATTAGGAAGGGATTCATTTCATTGGCAGAGGATATATTCGAAGCAAGGAGTGGGGGCTGATGGAGAAAGAGGCGATCATCCGCTTTGAGCGGGTGACGAAGGAATACGATGGGTTAGTCGTGCTCGATGATGTCAGTTTTGAGATTGAGCGCGGGAAGTTTTATACCTTACTCGGGCCGTCGGGATGCGGGAAGACGACGATTCTGCGTTTGATCGCGGGGTTTACGGAGCCGACGGAAGGAACGATTTATTTTCATGGAAAGCCGGTAAATCATGTACCTGCGAATAAGCGGCAAGTGAATACGGTGTTTCAGGATTATGCTTTGTTTCCGCATTTGAACGTGTTTGAAA # Questionable array : NO Score: 4.38 # Score Detail : 1:0, 2:3, 3:3, 4:0.38, 5:-1.5, 6:0.25, 7:-2.04, 8:0.6, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTTATCTTACCTATGAGGAATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:71.43%AT] # Reference repeat match prediction: R [matched GTTTTTATCGTACCTATGAGGAATTGAAAC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-0.20,-0.60] Score: 0/0.37 # Array degeneracy analysis prediction: R [12-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [48.3-63.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,9.68 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], //