Array 1 685149-685908 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP079195.1 Polaribacter sp. NJDZ03 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 685149 35 91.7 30 A..-..........................A..... CTAATTTTACTTTCTTTTTTAAATATAGAT 685214 36 100.0 30 .................................... TTTACAATCTGCTTGGGAAGGTTACATCTT 685280 36 100.0 30 .................................... TTTGGAGATGCTTACAGGAATGATTTTACA 685346 36 100.0 30 .................................... TGCTATTCCTAATTTATTAAAGGATGTTGT 685412 36 100.0 30 .................................... AAAAACAATTAGACTAGCTATGTTTTTGCT 685478 36 100.0 30 .................................... GGCAGCTATCTAAAATCTACAGCGGTAGGT 685544 36 100.0 30 .................................... CTACATTTGTAAGTTGTGCGCCGTTCCCTT 685610 36 100.0 30 .................................... AATATTACTACAGAAAGAGATACGGCTACA 685676 36 100.0 30 .................................... TGCAGATAGTGCAGAACCTCGTTTGATTGA 685742 36 100.0 29 .................................... GAAACTGCCTTAGAAAGTGATGCACAAGA 685807 36 100.0 30 .................................... ATTAAAGATTTTGCTCGGAATCTTTACTAA 685873 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 12 36 99.3 30 GTTGTGGTTTGATTAAAGATTAGAAAAAACGATATT # Left flank : AGCAATTAAAAATGAAAATAATTTATCCGATTTAACCGAAGTAGTTTTAAGAAGAAGTCCATCAACTTTGAAAATAATACCTGCCAAGATTGATGCTTTAGGTAATTTAAATATCAATTACTCTTTAAATTATATAAAATAATGATATAACTTATGATATTTGATGTTAATTTACATTACTAAATTTAGAAATTATGACTAAGCAAAGTGTTTACTTCTCTAAAAAAAATGATGAATGGTTAAAAAAAAAATATCAGAAGACGAGTTTAACAGTAAAAGTGAGGCTATCAATTACCTTATAAAACAAGCACGAAATAAAAAAGAATATTATAATTTTGTACGACTAAAAATAAAACGAAGAGAGTAAAGTGGTTTTAGTAATAAAAATAAAGAAGTATTATTAGCTGAAGTTAAAAGCAATTTAAAATAATGTATTTGTATAAGCTATCTATTGAAGCAGAAAAAGATTTGGTAAGGATTTATAAATACGGGTTTTATAA # Right flank : TAGTTATTATGTTAACTACTAGTAATCATGGTTTTAGAGTGAAATATCGTATATAAAAAATGCTTCTTGTAAAGACATAATTGCTTTATTTGAAGTATTTTTTGTTTCCTAATCAATAAATCTGTTCCCAAGAGCATTAGCTATGGCACGGAAATAAATATTTTTATTTAGAAGCAAATAACTATGTATTAAATACTTGCCTACCTCCCCTCGATTAAAAAAGTTCTAATTGCAATGGAGGTGGTTCTTTTGGAGTAGCAACTTTTCCCCAAAAATTCATGATATTACCATATTGTTTATCTGTAATTCTTAAAATACTCACTTTTCCGTAAGGCGGTAATAAAGCTTTTATACGTTTTTCATGAGCATCCGCACTTTCACTACTGGCACAATGACGCATATAAACAGAAAATTGCATCATTGTAAAACCATCTTTTAATAAGTTTTTTCTAAACAATTGCGCATTTCTACGGTCTATTTTAGTATCGGTTGGTAAATCA # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTGGTTTGATTAAAGATTAGAAAAAACGATATT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:75.00%AT] # Reference repeat match prediction: F [matched GTTGTGGTTTGATTAAAGATTAGAAAAAACGATATT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-1.00,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [73.3-78.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.87,0.41 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], // Array 2 3937441-3937244 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP079195.1 Polaribacter sp. NJDZ03 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================================= =============================== ================== 3937440 45 95.6 31 AC........................................... GCTTCTTTACGTTCCTCCTTACTCTCACTAT 3937364 45 100.0 31 ............................................. GGGCGGGAATCCAAACCACAATGAGAGGTTG 3937288 45 68.9 0 .......................C.....CTCCTTTG.TA.CA.G | ========== ====== ====== ====== ============================================= =============================== ================== 3 45 88.2 32 GTTGTGAATTGATTTCAAATTGTATTTTTACGTGAGCAATCACAA # Left flank : TACTGATACAACATGTGAGGCGATGCGTGAATAGCTATTTCTAGTTCGAATTTTATTTTATCCATTATTATTTTCTTAGGTTGACAATATAGTTATTAATTCTTTTTAAAAAAAATTTAAAACAGTTCTTGCCAGTTTGTAAAATTCTATTATATTTGCAGCCTCAAAACCATGGCGAGGTAGCTCAGTTGGTTAGAGCGCAGGATTCATAACCCTGAGGTCACGGGTTCAAATCCCGTTCTCGCTACAAGTATAGTACGAAAAGTCAAGATTTATATCTTGACTTTTTTTGTTTAGGTACAACATAGGTACAACAAATTGATTTTTTTTACTCATCATAGTAGAACAATACAAATTACCTTAAAAGCTATTAATTGCTATAATAAGCATTCAAAACAAGACATCTTTGTGTCAATATTCTTATTTAAAAAAAAATAACCTCTTTATTTCTATATACATACTCTTTTTAAATTTATTTTTTTTTTAAAACTTCATGACTT # Right flank : CAATAGAATTTCATCTGCTACCACTTCCGTAACATATCGTTTTTCACCTTCTTTGGTTTCGTAAGAACGGGACGTTAATTTACCTTCAATTGCAACTTCTTTTCCTTTGCCAACATATTCCGCAACTATTTCAGCAATTTTCCCCCATGCTACAATAGCATGCCATTGGGTATTTTGTACTTTTTCTCCATCTGAGTTTTTATAAAACTCATTCGTTGCCAATGAAAAATTAACAACTTTTTTCCCATCCTCTAGGGTCTTAACTTCGGGTACATTTCCTACATTCCCGATTAACTGTACTTTGTTTTTTAGTGTGCTCATAATAATATATTTAAAGATTAATTAAACCCTATCTGAACTATTCAGACAGTTTGCTATTATTTTTTTTTGAAGTGATTTACTTATTATATCTAGAGCGTTTTCCTTTTTTGTTTTTTTTGGTGCCGCTTCCTTTTTGATGTTTTTGTATGATTTCATAAGTTTTCATTTTGATTTACTTC # Questionable array : NO Score: 3.58 # Score Detail : 1:0, 2:3, 3:0, 4:0.41, 5:-1.5, 6:0.25, 7:0.02, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTGAATTGATTTCAAATTGTATTTTTACGTGAGCAATCACAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:81.48%AT] # Reference repeat match prediction: R [matched GTTGTGAATTGCTTTCAAAATTGTATTTTTAGTGATAATTCACAGG with 93% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [63.3-85.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.18 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], //