Array 1 7975-7525 **** Predicted by CRISPRDetect 2.4 *** >NZ_PVWJ01000094.1 Merismopedia glauca CCAP 1448/3 NODE_288_length_20566_cov_5.91298_ID_46190, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =================================== ======================================= ================== 7974 35 68.6 23 ....TT.G.....G......GC...CT..TT...C CCGGTACACAAGATGAAGCTGGT Deletion [7917] 7916 35 100.0 37 ................................... ACGACCCCGATAATGTTAAGTTATTGTCGGATTGTGC 7844 35 97.1 35 ..............T.................... GCTGCTGCTTATCCCAATGCGGTTGTGTACCAAAG 7774 35 100.0 39 ................................... GGAAGAAGAACAAGCTTGATAAACCTGAGAGCCGAAATG 7700 35 100.0 36 ................................... ATACTTATAAGGAGATGAGAAAAGATCCTTCCAAAA 7629 35 100.0 35 ................................... GCAATTTGAATATCGCAATGAGATGGTGAAATTGT 7559 35 100.0 0 ................................... | ========== ====== ====== ====== =================================== ======================================= ================== 7 35 95.1 34 GTTTCCAACTAATCCGATCGCAAAGGATCGGCAAG # Left flank : ATGTATCACGCAAAAGCAAACGACGGAATAAGCCTTTGATACTACTACCAGGAATAAAGGGAATACCATCTTTACCCATCACCGGACGAGCAATACTGTCTTGTCCGCAGTTGCTAAAAACCCGAAATGGAAATGTTAGTTTAAGGCGATAAATTGAACCATCTAGTCCTAATTTTGGTTCTGGATGTTGATATAAAGGTTGCTTATTTTCTTGGGGATATATCCATTGTTCTGCCCAATCTCTTAAATCTTGATTATTTTTGCCATACTGTAAACCACACCGTCCATAAATTTGAGCGCGATACATCATTGGTACTAGTTTAGGATCGGTTTCTATTTCCATTTCTGGTTCTGGAATATCTATTTTGATATCTTTCTGATCGAATGCTTTTTGAAGTTGTTGAGCAAGAGAATTCATTGGAGAAATGAAGGAAGAGATCGCTTTTATCAATATTAGGGAATAGCGATCGCCTGAATCTAAGCGATCGCTTTTAAGTACA # Right flank : ACCACCCGCTAGAAGCAAGAGCCTGTAAGCAGTCTACAGCGATTTTTCGCGGGATAGTAAAAAGAGGTCAAATAATTCATAATAATTATCAATAAGCTAGAGACTGATGGCATTCAAAGCCATACAGGGTAAGGCATCGACGCACCTCAACGAAAAAACAAGGGTTTCAGCCATTAGTGCTAGCCCGCGAATACTGATAGTAATTCATACGACTAAAACTAGATTTCATTTATACTCAAGTCATTTCAGATGATAATAGAAATAGACCGCCGACTCACAAATTTCTGACAAGCGGGGAGTTACTGATGACTTATCTAAAACTGCGTCAAAAAATCGAACGACAATTAGCTCAACTTCCTCCAGATCGACTCTCTTTAGTGAGTGACTTTTTGGACTCCCTTCAAAGTCAAAGTACCAGTGTTAGTCAGCCACCACTCCGTCGATTAGCTCCTATTAAACGAGGAACTAAGGCGATCGATCTGCTAAAATTTGCTGGAACT # Questionable array : NO Score: 2.91 # Score Detail : 1:0, 2:0, 3:0, 4:0.75, 5:0, 6:0.25, 7:-0.09, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTCCAACTAATCCGATCGCAAAGGATCGGCAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:51.43%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-5.40,-6.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-12] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [50.0-61.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.41,0.64 Confidence: LOW] # Array family : NA // Array 1 7780-8629 **** Predicted by CRISPRDetect 2.4 *** >NZ_PVWJ01000101.1 Merismopedia glauca CCAP 1448/3 NODE_311_length_19316_cov_7.11539_ID_49440, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================================== ================== 7780 36 100.0 37 .................................... ATCACTTTGCTTTTCGTAAGATCAGTTATGATTCTGA 7853 36 100.0 36 .................................... TTTAGCCGGAGAAACTAGCACTGGATTGCTATTGAA 7925 36 100.0 36 .................................... TAATTTCCACACAACCTACAAATGTCTCTACAAATG 7997 36 100.0 38 .................................... TTTTTAGATAAATTTACCCCCAGGCAACCCGCTCACCC 8071 36 100.0 46 .................................... TAGCATCCAGCCACAAGCCCGACCGTTTCCAACAGGAACACTTTGA 8153 36 100.0 36 .................................... TTTTTACCTATTACAGCCCAGTGGGTATTACCTATA 8225 36 100.0 39 .................................... GAAACAAAGAGTTTGCGGTTTTCAACTCTATAATCTAAA 8300 36 100.0 37 .................................... ACTCCTGGGAACACTACCACGATATTGTTAGCCACAA 8373 36 100.0 37 .................................... AGCTTACAGTCCTTTTCACCGAGGTAAGTATGTACCA 8446 36 100.0 38 .................................... CTTTCTACGCCATCCAACAGTGTCAACTCATTGCTGAA 8520 36 100.0 38 .................................... GCCAATGCTAGCCTTGAGTTGATTCAAGGATGATTCAT 8594 36 94.4 0 .....................T.............G | ========== ====== ====== ====== ==================================== ============================================== ================== 12 36 99.5 38 CTTTCCATAACCACTTCCCCGCAAGGGGATGGAAAC # Left flank : GTCCTACAATTTAGGTTGATTGTTGATTGAGATAGTTAAAAACCTTTTTCTTGGTGAATTTCGGCTGTACCTTGACAATTTAAAAACTATCACCTGCCGATTTGGGATTGGCTCTACTAAAGTGGAGTTCGACACAATCCATCCATAACAGGACTTACGCAAAATCATGATAAAACGAACCACAAAGGACACAAAGGACACGAAGTTAAGAGGGTTTCAGAAAGTTATTGCGTAAGTCCTACATAAATCAAAGATTCTTTCAACCTCTTTTCTGGAGTCGGGAGGATTTTTGAGAGTGGAAATATAGAAATTAACACACCTTGGCTAACGGCTGAAACCCTTATGATTTCGTTGAGGTGCGTCGATGTCTTGCTAGGTAAGGGTTTTGGACTTTTACTACTGGGCTTATTGCTAAAATAAGTGGGGTTATTGACAATCAAAATAAGGTGCGTCGATTTGTGGTCTGAAACTCTCTCCTAGTAAAGCCTCCTGGACGAACC # Right flank : GGGGCGAACAGCTACTATAATTTTGGTGATCGCCATTGCTAAAAACAATAAATAACGAAGAGCGAGAATTAGCCAGTCCGTTTTAACAGCTAGCAGTGGAGCGACCAGGGGATTTATCCCCGTGTATCTCTTATTTATTTCGTTGATTTTCAATATATTTCTGAATTGTTTCGGTACTAGCATTTCCGGCTGTAGCCACAAAGTAACTCGGAGTCCACAGCGTAGGTAATTTGAGTAACTGTGGGAATTCTTGCCTCAAATGGTGAGATGCACGACATTTAACTCGCTTCATAATACTGCTAGGTGCATCAACAGGTTCGCAATTTAAAAAGAGGTGAACGTGGTCGGGCATTATTTCTAGGGCTATTAGTTTCCAATTATTTTCAGCACATAGCTCAAAAATTATTTGCTGTAACCTATGCGCCACTTCTTCAACTAACACGGGATGACGGCGTTTTGGACAGAAAAGAAAATGATAATTGAGTCATGTAACAGAATGC # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTTCCATAACCACTTCCCCGCAAGGGGATGGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [10,7] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-9.30,-8.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [51.7-63.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [1.15,0.27 Confidence: MEDIUM] # Array family : NA // Array 1 70634-71330 **** Predicted by CRISPRDetect 2.4 *** >NZ_PVWJ01000005.1 Merismopedia glauca CCAP 1448/3 NODE_31_length_74969_cov_7.0989_ID_36351, whole genome shotgun sequence Array_Orientation: Unconfirmed Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ========================================= ================== 70634 36 100.0 38 .................................... CCTTGGGCGAATAAGTGGATTGTCATCAAGACCATCCT 70708 36 100.0 37 .................................... CAAAACTAAAATGTTGACATACAACTTGTTCGATTTT 70781 36 100.0 41 .................................... TTGAGCGTAGTAACCTCAGTTGAATGTAAAACTCTTTTAGA 70858 36 100.0 40 .................................... CCGATTACTCGTGCTGATGTCGATATGTGGGTTACCGCTC 70934 36 100.0 37 .................................... TTTTGAGGCATACTACTTTATGTCTATTTACCTGGAA 71007 36 100.0 35 .................................... GAAAAAATGCAATTTTTATTGCAGATGCTGATTGC 71078 36 100.0 35 .................................... TTTCACATCGGTGAAACTTCAGGCAAGACTGATAT 71149 36 100.0 37 .................................... TCTCGGAACCACTCTTGGAACAAGCATTACTTCAGCC 71222 36 100.0 37 .................................... CCCAGCCAACATCCTTTTTGCTATGGACGGAAATAGG 71295 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ========================================= ================== 10 36 100.0 38 GTTTCCATCCCCTTGCGGGGAAGCAGTAATGGAAAG # Left flank : GAGATCGTCTCTATGCTAGAGCGCGCTGTAGTTTTAACGCCAACCGAAATGGATTATTTGAATTTGATTGAGAAACGCTACACTGCCCAAATAGAGGGCGATTCTTTACAATAGAGGCTGAACGATTGTCCTTTGGGGCAGCGCCAGGGCGGGAACTAACTATCCCTCTTTTGTTACTTTAGGGAAAGAAAAAGAATTGATAGTTTAACTAGCGATCGCGCTGCTCGTCAAACAGTGCATCTAGGCTAATATTGCCATAAGATGGCTAAAATCTGGCATAGTGCCGAATTACCTGCATCAGAAGTTCTCTATCGCTTGTCAGGGTATCCATTGTTTGACCTCTGTAGTTTATCTGTTTGTTGACAGCAACTTTTCAGAGCGATCGCACTTCCATTTTGCCATTCAATTGTGAAATCTAACGTGTCATTTTGCCCCAAATTATCCCGCTTCCTTAACTGAGCTTCGTGAAACAAGGTTCTGGCGGCATGACAATCATTGGT # Right flank : GAGTTCGTCCAGGAAGCCTTGTCAGGAAAGGGTTTCAGAGGCTGAAATAACCTACCTAATTTTATTGGTCAATAAGACCCAGAATTTTCTCAATAAGACTGATGCTTATAACCTGAAACCCCTTCAGAATCTATCATTAACTTACCTCAACGCAATCATCAGGGTTTGAGCCATTAGCAAAGGTAGGTTAATTTATAGCAATTCTCATATCGATGAGGTACAGAGATCTTGGTTTTGAGTCAGGAGTCAGGAGTCAGGAGTCAGGAGTCAGGAGTACCTCACTCATTTGAGAAACGCTATATATCTTTACGTTTCTGTCTCCAGTTGAACCAGACTGAGCGTATTAAGTTGTCAAGGTAGATTACTAGATCGCATTCTACAACAGAAACAGTATTCAAGAACGTCAAATTGATCTCCTGAGTGTCAGATATGAGATTTTGAAACTAACTCAGTCGCATTAAACCTGTCTAACCACAATTTTTGCCCCTATTTGAGCCGCA # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTCCATCCCCTTGCGGGGAAGCAGTAATGGAAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [9,8] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-8.40,-9.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [51.7-55.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: NA [0.37,0.37 Confidence: NA] # Array family : NA // Array 1 8042-6972 **** Predicted by CRISPRDetect 2.4 *** >NZ_PVWJ01000128.1 Merismopedia glauca CCAP 1448/3 NODE_399_length_14794_cov_7.33703_ID_54360, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ======================================= ================== 8041 37 100.0 36 ..................................... CATTAGTAGGGTAATTGATGGCATTCTACGCATACT 7968 37 100.0 34 ..................................... ACAGTTAGTTTGTGACTAAAAATTAACACCTGGC 7897 37 100.0 35 ..................................... ATTAATCATAAGAAATCCTCGATGTACCAGGATAA 7825 37 100.0 36 ..................................... CTCATTATTCCCTGTGGCTGAAAGAGAGATAATAAA 7752 37 100.0 36 ..................................... GAATCGTTTAGATCCCCACTTAGGCAGAAAAAGGGC 7679 37 100.0 36 ..................................... GTGCAAAATCCCAAGGAAAATTCAAACCTCGTTCCA 7606 37 100.0 38 ..................................... TTGTGTTGTAATGTGGTGATGCGAGTACCTTTACTTAG 7531 37 100.0 37 ..................................... CTCTCATTGACACCTGACAGATGGGCAGCATCTTTGA 7457 37 100.0 39 ..................................... GACATGGCTAGGGATCTTGATCTCATTGTGTGCGATCAG 7381 37 100.0 39 ..................................... ACCGGAGGTAGGCAGTACTCATCAACTGCGTAGGTTTGG 7305 37 100.0 39 ..................................... GGGATCATCGCTTCGGTGTGGTTCAGTTGTTTGGAAAGG 7229 37 100.0 38 ..................................... TAAAGCTATTAATTGATGTGGCAACGTCTCAAGACAGT 7154 37 100.0 38 ..................................... CTGATATACCACAAACTTAGCAGCGTTCAGTACTTCAA 7079 37 100.0 34 ..................................... ATTACGGAACTCCCCAAACAGCTTATCCTGAGAA 7008 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ======================================= ================== 15 37 100.0 37 GTTGAAACTAATAGAAATCCCTATGAGGGATTGAAAC # Left flank : TATTTCTGAAGACAAACGGCGTACCAAAATATATAATATCCTGCAATCATATGGACAATGGATGCAATATTCGGTATTTGAATGCGACTTGACAGAAACAGAATATGCTAAATTGCGATCGCGTCTCAGTAAACTCATCAAACCCGAAGAAGATAGCATTCGCTTTTATTCTTTGTGTGCTTGCTGTCAAAAGAAAATTGAACGCATCGGTGGTGAATTGGTACGAGACGATAGCATCTTTTTCGCTTGACTCCGCGACTGGGTGGGTGTTAAAACTGCCAAGGAATTTTGACAGGCTGAAACTCTCTCTGCTTCTACCTTTAAGCCCAATCTAGCCCACAAATCAGCCGCGCAATTCTTCTATCGCTTTCCCTGCATACGTTTTAGCTCTTTTCCCCGTTGTACTTCCTTGCACGCCACAGCCTCAAAGTGCTATTTTAGATCTCAGTAGCGCAATTGAACCTTGAAAACCATATACTAACTACGTTTTCAGCAGCGCC # Right flank : GAAACACATTAAATTTTTAGCAGCACGAAAATAGAAATTCATGCTGCTAAAAGTTGAGAGCAAACCGAAATATTAACCCTTCTTCAACCAGCTAAACATAGCCCGCAAATCTTCCCCGACTTCTTCAATTTTGTGTTCGGCTTCGCGACGACGCATAGCTGTAAAACCAGCCTTACCAGATTGATTTTCTAACACGAATTCCCGCGCAAATTGACCAGATTGAATTTCTTCTAATACCTTACGCATTTCGGCGCGAGTTTCGTCGTTGACAATCCGAGGACCGCGAGTATAATCGCCATATTCAGCAGTATTAGAAATGCTATCGCGCATCTTAGCTAAACCGCCTTCAACGATCAAATCGACGATCAATTTAACTTCGTGCAAGCATTCAAAATAGGCTAGTTCTGGTTGATAACCAGCTTCAACTAAGGTTTCAAAACCAGCCTTAATTAAGGCACTCAAACCACCACAAAGAACCGCTTGTTCGCCAAATAAATCGG # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:0, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGAAACTAATAGAAATCCCTATGAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:64.86%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-7.20,-7.40] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [68.3-56.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,4.5 Confidence: HIGH] # Array family : NA // Array 1 11825-13635 **** Predicted by CRISPRDetect 2.4 *** >NZ_PVWJ01000073.1 Merismopedia glauca CCAP 1448/3 NODE_227_length_25843_cov_6.34394_ID_40131, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ========================================== ================== 11825 36 100.0 35 .................................... CGCAACGCTAAGAGTGTTAGCACAAACTACTCTAG 11896 36 100.0 35 .................................... TCGACCAAGACTACTTTGGAACAACTCTATATTCA 11967 36 100.0 37 .................................... AAGAAATCTTTTTAGAGTCAAAAGGTCCGTGCAACAT 12040 36 100.0 42 .................................... AAAGAAAACAAAATTTCCAAATTTAATTAACCAAACTTCAAC 12118 36 100.0 35 .................................... TAGTGGTTTTGGCCACTACTGTAGTGTTGTCAACC 12189 36 100.0 41 .................................... TTCTTGTGTGAAACGTTCAGCAGCCATACGGTCGTTGTGTG 12266 36 100.0 37 .................................... ACTATTTGGATGTAACCATTATTGCTAGCTTTAAAAC 12339 36 100.0 35 .................................... GCAAAAATGAAACACGAAGTGAAATTAACGCTAAA 12410 36 100.0 40 .................................... TCAGGTACATAAATGTACTTGACGATGGAAAAATCACCAT 12486 36 100.0 37 .................................... TATGTGCCGTCAGAGAGATACTTTCCAGCACCAGGAA 12559 36 100.0 39 .................................... CGGTTACTTCAAAAGATTTTGAAGTGTAGATAAAGGGAA 12634 36 100.0 37 .................................... ATTATTTACCATTTCAGCAGGAAAATCGATATACTTA 12707 36 100.0 41 .................................... ACCGGTGAAATAGGCGGTTTGCCTATTTCTTACTTTCGGAG 12784 36 100.0 33 .................................... AATAGATGCAGAGCATAACAAAATTAACACAAA 12853 36 100.0 35 .................................... GAGAGTGAGACAACAACCAAGAACATGATGGTTAC 12924 36 100.0 37 .................................... TTCTATCTGCATTCTAGTTTAACATTTTCCAGGTAAT 12997 36 100.0 40 .................................... CCAACATACGCTGTAATGACTGCGCCAATGTAACCGTATT 13073 36 100.0 41 .................................... AAATAATTCTATCTTGTTGCTATAGGCAACAAGATACCCTA 13150 36 100.0 36 .................................... AAAAGTTTGCAGTGAATCAGCCTTTATAGAATTCAA 13222 36 100.0 41 .................................... GTCACTTCTATATCAGAAGGCCCATCCACAGAAATTTCAGG 13299 36 100.0 39 .................................... GCAGAAGAGAAGATCCCATCGTTAGAACCCGCAGCTACG 13374 36 100.0 34 .................................... TAGAGATACAAGGCAAGTGACAAAATGTCATCGC 13444 36 100.0 40 .................................... TAAAGAATACCGATGAGAACCAAATTGTTTTGATTCTACA 13520 36 100.0 41 .................................... CAAAAATTCTTTTTTTGAAGAAAAAAAGAAAACTAATTAAC 13597 36 97.2 0 ...................................A | ACA [13628] ========== ====== ====== ====== ==================================== ========================================== ================== 25 36 99.9 38 CCCTACCTATTGGGTTAAATAGGATTAGTTGGAAAC # Left flank : GATGTAATTATTTATCATGCTGGCTTTAGTGGTTTATGATATTCCTGACGATAAACGTCGCACTAAATTATCCAAGTTTTTAGAGGGATATGGGAGGAGAGTGCAATTTTCAGTTTTTGAGTGTTTCCTGAGTTTAGAGGAGATGCGACAGCTTTTTAAGCTGATTGAGAAGCGAGTTAAACCTCAAGAGGATAACGTTCGCTTTTACTGGATTTCTCAAGATGCGGTATCAAGGGTTTTAACTATCGGTAGTGAGTCTCCTGAATCTCCGCCAAAGTATTATGTAATCTGAGCGGGAATGTATCGGAGCAATCTGCAATAACCTACCTCATCGACCTCGGTGAAACCCTGATTATTTCGTTCACCTAAGTTAATCCTTTACAGGGAGAGGGTTTGAAGATTAGTTTTGAGTTACTTTGGGCGTTGATTTATACTTAGGGGAAGGGGTAAGTTATTTTAAAGCTTGAAATCCTTACTCCGTCTGCTCTGTCAGACGAACT # Right flank : AAAAGAGTGGAGAACCTCCACTCTTTTTTTGGTAACTAGCTGGAAACACCTCTTTCCAAGGGCACGCTTTAATACATATCAAGGAAAGCGAAAAGAACCCAGTCAACAAAGTATGAAAATACAGCGTCGGGTACTAATACTCGCAGATGCAGACAACACGCAAATAGCCGCGCAAAGCTTCAACAGAAAGCTAGATTGGCTAAAACTTCGAGATTATCTTGCCGACCCTAAAGAAGGAAGAGAACTCGTTGAAATGGTAATTTATGTGGGGTTGCCTCCCTTAAAAGCACAATTTAGCGAACCAAGAAAAAACAAAGAAAAGTTGATTTTTTGGGCGAAAAGTAATGGCTTTTTAGTAGTGATGCATCCCGGTAAACCAAAAGGAGAAGACTATGAAACTGACATAGATATTGTGATGGCAATGGATGCCTTGGAACTATCCTTAGAAATTCGACCCGATATTGTCGTTTTAGTCACGGGAGATTCCGACTTTGCCTATC # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CCCTACCTATTGGGTTAAATAGGATTAGTTGGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:61.11%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-5.90,-3.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [58.3-60.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0 Confidence: HIGH] # Array family : NA //