Array 1 32094-32481 **** Predicted by CRISPRDetect 2.4 *** >NZ_MPVV01000028.1 Acinetobacter baylyi strain XH444 XH444_contig_28, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 32094 28 100.0 32 ............................ AACGCGCATAACCGTCAATCGCTTGCTCAATA 32154 28 100.0 32 ............................ TCACTAGTACAGATGTCGGTTCCGCATTAAGT 32214 28 96.4 32 .......A.................... TAATCCAGCAGATGGTACTGCACGTATCATGA 32274 28 100.0 32 ............................ GTGATTGTTAATTTCTGGGTCAGAATAGCGAT 32334 28 100.0 32 ............................ ATTCACCGTGACACGTGTACCCGCCGTTTCTG 32394 28 100.0 32 ............................ TCTTGCTTCTTGAAGCTTATAAATCGCATCCA 32454 28 89.3 0 ........................ACT. | ========== ====== ====== ====== ============================ ================================ ================== 7 28 98.0 32 CTTAACTGCCGCACAGGCAGCTTAGAAA # Left flank : ATAACTAAAAAATGATTTGAGAATGGTTTCACCGCTTAATTTTCCACTGGCAATTGGGGTAAGTACGCCAATCGTTAAAATAATCACACCAACATTTAGGCCATGTTGCTGTAAAAAAGGGAAAAATTCACTTAAAGGTGTAAGCTTAAAAACAATTAATACGCCTGCAGCAATAGTTACCGCCGCATTTTGGCTAAAAATACCACAAGCCAGTAAAACGAGTAGAACCAGTAAATTGACATCAAATTGAGACATGAGCATGGTATGAATAGTTAGTTTTGCAGGAATGATTATTGTATAACGATTTTACCAACACTTGAAAAAGAAAGACTTTTTACAGTAAATTGAATATCTATTATACTGGCTTACCCCAAAATTTTAGACTCTTTAAAAAATCAATTTAAATCAAATGCTTATATTTTGACTTAAAAACTTTGGTTAGAAGTGAATTTGTTGATTTAAGTTTTTGATATTTCGACTATTGCTCAACAATATTTACT # Right flank : ATTCAATCAATTGACTTAAAAAAATAAGTTACACTAGGATGTCTTTTTTATTCTGGATATCGATATGCTCTTGGAAAAAATGTTGCAGTCACAAGGTTTTGGTTCAAGAAAATACTGTCAGCAACTTATTAAGAACGGAGCAGTTTCGATACAAGATGAAATTCAAAAAGATCTAAAATATCGAATTCATGATTTAACTGATTTTAATTTTCAGGTTTTTGATCAAAATTACGTATATCGGGAAAAGGTATATATTATTTTAAATAAACCTAAAGGCTTTGAATGTTCTCATCAGCCACATCATCATCAAAGCGTATTCAGTTTACTGCCAGATTTATTAATTCAGCGCAATATTGCGGCTGTAGGGCGCTTGGATCAGGATACTACAGGGCTGTTGTTACTGACTGATGATGGACAATACCTACACACGCTAACGCATCCCAAGAAGCATGTTCCAAAGGTATATCATGTGGCTACGATTGATCCAATTACAGTTGATC # Questionable array : NO Score: 6.16 # Score Detail : 1:0, 2:3, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTAACTGCCGCACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [9,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched CTTAACTGCCGCACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [75.0-75.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.65,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 52-675 **** Predicted by CRISPRDetect 2.4 *** >NZ_MPVV01000017.1 Acinetobacter baylyi strain XH444 XH444_contig_17, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 52 28 100.0 32 ............................ AGTCGACCGCGAGACGGGAAAAAGTACGAACA 112 28 100.0 32 ............................ CGTAGACTGCCACCACCGCACCCCCATACATT 172 28 100.0 32 ............................ TCGCGCAATCCATCGCGAGGGGCCTATTCGAG 232 28 100.0 32 ............................ AATGAGAAAATCAAACCACCCATGATGATCGT 292 28 100.0 28 ............................ TACTCGAACTTGTCTGTCATATTGCCCT 348 28 89.3 32 TAC......................... TGAATACTCAAATGACAATAAACAGGATAAAG 408 28 100.0 32 ............................ TGTGAACAAATCCGTTGTAAGCCGCGCCTTAT 468 28 100.0 32 ............................ ATTTAAAAGCCACTCATCTGACACACCTAAAA 528 28 100.0 33 ............................ TTATCGAAGTATTCTGCTTTGGGTGCGGCAATG 589 28 100.0 32 ............................ ACCAGAAATGATTCCAGATATTCCAGATGAAT 649 27 82.1 0 .C......T..............-..TC | ========== ====== ====== ====== ============================ ================================= ================== 11 28 97.4 32 CTTCACTACCGCACAGGTAGCTTAGAAA # Left flank : CGCACAGGTAGCTTAGAAATTCCACCAATCAAGAGTGGATTGGTCAATAGTC # Right flank : CAAGTAAATTTTGATCAAACATTTAAAGCATATTAAAATAGTCACTTAAATTATCAATCAAACATTACTTTACTGATTCATATCAGTTTTTCTAACGATAGATAACAAAATTTTGAGTAAAAGAAATGACTGCATGGCAACAACTTGGGATAGAACCCACTACAAATTTAAGAGAAATTAAAAAAGCATATGCTGTAAAGCTCAAGCAAATTGATCAAGATACTCAACCAGATCAGTTTATTGCATTGAGAGAAGCCCTTCAAACTGCCCAATATGAAGCAGAATATGGACTGTTTGATCAAGAAGAGAATCAAGATTCTCTATTTAATGATGATCAGCCACTAAATTTTAATGAGCACACTGAATCCGCTCAAGAAAATGAAATCAATCAATCATCAGACACTTTACTTGAAGAAATTTATCTTGCCATTCAGCAACGTATCGTCGAGCAAGATATTCACTTCAATATTCGAGAAGCATTGCAAAAATTTGCTGATCAT # Questionable array : NO Score: 6.13 # Score Detail : 1:0, 2:3, 3:0, 4:0.87, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTCACTACCGCACAGGTAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: F [matched CTTCACTACCGCACAGGTAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-6.00,-5.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [48.3-81.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.27 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 2 75707-81134 **** Predicted by CRISPRDetect 2.4 *** >NZ_MPVV01000017.1 Acinetobacter baylyi strain XH444 XH444_contig_17, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 75707 28 100.0 32 ............................ GACACCAAAGGTAATAAAGCTATGAAAGAATA 75767 28 100.0 32 ............................ TTTACTCTTATTATACTATTACCCCTAACCCC 75827 28 100.0 32 ............................ TCCAGCTAAAATCGTTTGAGGGTGAAACTCCT 75887 28 100.0 32 ............................ ATGATTTCGAAAGGCTCTCCGAGTACGTTATT 75947 28 100.0 32 ............................ ATTCCCAGCATTCACGCTGAGTGCTTCGGCAC 76007 28 100.0 32 ............................ TGTGCAGCCGTTTGGCGCGCCCCAGATATGCG 76067 28 100.0 32 ............................ AGGAACCGTGGCAGATTGCGTTAATATGTTAG 76127 28 100.0 32 ............................ TAACGATGGAATAACGTTCAAAGAATCTAACG 76187 28 100.0 32 ............................ AATTCATGAAAGATCATTCGCTGTGTTTGGGG 76247 28 100.0 32 ............................ ATTTGCCGCTTTGAATATTTGATGCACCTGCT 76307 28 100.0 32 ............................ AAATCGATGAGGGACAACATCAGGCACTCGAC 76367 28 100.0 32 ............................ ACAGGGCAGGGAAATAACCAAAAATCGATATA 76427 28 100.0 32 ............................ GACATAGGAACGATATGAAGATGATTTTTTTT 76487 28 100.0 32 ............................ ATCAAGCTATCGTCATTTGGCCGATACACAGC 76547 28 100.0 32 ............................ TCTGCCATGCATACAATTTGATTTGGCTGCGT 76607 28 100.0 32 ............................ AATCATCAATATCTTTTTGCGCTTTGCGTGAA 76667 28 100.0 32 ............................ TCTCACGTACAAAAAAAAATCCTATTTGATGT 76727 28 100.0 32 ............................ GCGATTGAATACCGATAGATCGGGGATATTAA 76787 28 100.0 33 ............................ ATACACTACATTGAACTGCTCGGACTTAAGCAT 76848 28 100.0 32 ............................ AAAAAAAGTGTAGCCAACTTCATACAGTTACC 76908 28 100.0 32 ............................ CAGGTGGCAGCGTTCCATTTTCGGGGGCAAAT 76968 28 100.0 32 ............................ AAAACCACATTATAAGGCTCGGTAAATGTGTA 77028 28 100.0 32 ............................ ATGAAAATAAGCCCCAATATTGTCAGTGTTCC 77088 28 100.0 32 ............................ GTTTCCGCGTCATTCGGGTACAGTTGCGACAT 77148 28 100.0 32 ............................ TTGAAACCTATGAACTTTGTGTTATACGTGTC 77208 28 100.0 32 ............................ CTTATCAAAATCGGTGGGATCTTTGTCGTACT 77268 28 100.0 32 ............................ GAATTATGCTTTAAAAAATCCTTTCGCGGGTA 77328 28 100.0 32 ............................ AATCCGATTTCTGCTGTTGCTGGGGTTAGAGC 77388 28 100.0 32 ............................ ATGTACTATAAGTCACATGGTAAAGACACGAA 77448 28 100.0 32 ............................ GAAACGTTGAATCCAGAACCAGCAATCCCAGC 77508 28 100.0 32 ............................ AAACTGTGGAGCATTACATCTACCATACTGCC 77568 28 100.0 32 ............................ TAAAACAGTCAATGTTAATTGGGGTGAACAAT 77628 28 100.0 32 ............................ GCGGTAGCTGGCGCGGTGTTTGCGTTTTTTGG 77688 28 100.0 32 ............................ TATAACTAGCATGTCAGAAATAAAACTATCCG 77748 28 100.0 32 ............................ CGTTGGTACTGTTGCAGGTGGTGCATTGGGGA 77808 28 100.0 32 ............................ GACTCCGCTACTTAAGAAAGAGAGCATAGGTG 77868 28 100.0 32 ............................ TAGAAGTAACTTACGATAACATCTTTGGCGCC 77928 28 100.0 32 ............................ TCAAGCATGTGATCACTAATGATTCGGTTTTT 77988 28 100.0 32 ............................ TATACTCCTTATATGTAATTTACGCGTAAACC 78048 28 100.0 32 ............................ CACTACATTTATACCCGCCGTTTACGCTCTTA 78108 28 100.0 32 ............................ GTTTAATGTGGCGTTCAGGTCTTGTTCGCCAA 78168 28 100.0 32 ............................ ACTCAGTTGACCAATCTTACTGCTTCACTTAA 78228 28 100.0 32 ............................ AGAAGATTTGGTGGGCAAAAATATGGAATATA 78288 28 100.0 32 ............................ ATTCTTAGCTGCATCACGCAAGATTTGCTTTT 78348 28 100.0 32 ............................ CTCATCGAAACATACATTGAGAAAAATCATTT 78408 28 100.0 32 ............................ AATCATCATCGACCGCAGTATTGAAGCGAAGC 78468 28 100.0 32 ............................ AGCCCTTCGTATATTTGAATAGTGCATTGGCT 78528 28 100.0 31 ............................ AAAAATACCCGCGCCCAAGTGATCCTGAAGA 78587 28 100.0 32 ............................ AACCATATAGAATTGTTAACTTTTGTAAATAA 78647 28 100.0 32 ............................ GATCAAAACAACAAGCGTACCAATGATGCCGA 78707 28 100.0 32 ............................ ACAAGGGATGTATTGACCAGGTGTGAGCGCAA 78767 28 100.0 32 ............................ ATTCTTGAGCCGCCTGCAGATTTGTTATGTCA 78827 28 100.0 32 ............................ ATGGTTCGGGGTTGTAGCTGTACGCCCCAGAT 78887 28 100.0 32 ............................ AAGAGCAAAAGGTAACTTGGATCTACCGCCAC 78947 28 100.0 32 ............................ CACGGAAATTGGAATGATGATTTCGACGGTAA 79007 28 100.0 32 ............................ TTGTTGAGCAGCAGAACGGCCTTTTACCAACC 79067 28 100.0 32 ............................ AGATACCTCAGTCCAAGCTGCTGAATTTTATC 79127 28 100.0 32 ............................ AAGAGACAACAGGGCTTATTAAAGTAACTTGT 79187 28 100.0 32 ............................ AAGTTTTATTTAAGCCCAAAGCTAAAGATAGT 79247 28 100.0 32 ............................ GTTAGCTGCACAAGCTCTGGGACTTTAATAAA 79307 28 100.0 32 ............................ AATCGCTAACCAGTAGAACCCGCGTAGCAGCG 79367 28 100.0 32 ............................ AAGCGTTGCGAGCGCTCAAAAAGTGGCTGATC 79427 28 100.0 32 ............................ GTCTACCAAAGCGAAAGTATCATTTTCAATGA 79487 28 100.0 32 ............................ TGTATCGGAGCTACGTCAGAAGGTCAAGCACA 79547 28 100.0 32 ............................ AGGTCGATTTATCATAAACATCGGGCACGATA 79607 28 100.0 32 ............................ GCCAGAAATTTTGACACTTGCGTTTAGCAATA 79667 28 100.0 32 ............................ AGATTGTCTCTAAATTTAACGCGTGGCTTTGT 79727 28 100.0 32 ............................ AAAGCCGAGCCCAACTTTTGACGCACAAAAAG 79787 28 100.0 32 ............................ GTCAGTGATTGCTTTCATTGCCGTAGCTACGT 79847 28 100.0 32 ............................ ATCCGCGCCCAATTTGTCCCACCAATCTTTTT 79907 28 100.0 32 ............................ GATTCCATAGAACGTACCATTGACGCGCAACA 79967 28 100.0 32 ............................ TGGATCTCTGCAGAAATCACATTGTCCAAATA 80027 28 100.0 32 ............................ AACAGGCGTTACTGAGCTATGTGTCGTTAAAA 80087 28 100.0 32 ............................ AAGCATGCCTTGATGCATACAACAAAATTGCC 80147 28 100.0 32 ............................ TGCGAGTTCAAACTTCTTTAAAGATGCAACAT 80207 28 100.0 32 ............................ CGTGGAATCATAATCATAAGCTTCACCGACAC 80267 28 100.0 32 ............................ GATCAGTGGCGCGTCTACAGTGAGCGAGTGGG 80327 28 100.0 32 ............................ ATAATTGCAACAACAGCATAATATACATACCA 80387 28 100.0 32 ............................ CTTACTTTCGCTTGCGCTTCGTTACGAATGCC 80447 28 100.0 32 ............................ TCAACCAGGATCGGATAACCATCAATTCTAAA 80507 28 100.0 32 ............................ AACAGGCGTTACTGAGCTATGTGTCGTTAAAA 80567 28 100.0 32 ............................ AAGCATGCCTTGATGCATACAACAAAATTGCC 80627 28 100.0 32 ............................ CAAATGTAATCAGGATTAGTCGATTGCAGCGT 80687 28 100.0 32 ............................ AGATCGCCTGTGCGTAGGTCAACTGCACCATT 80747 28 100.0 32 ............................ AGCTGAACACGCCGTTTTTTAACTTCCGCCAT 80807 28 100.0 32 ............................ ATGCACCTGATCCTGCCCAATGAGGGATTTAC 80867 28 96.4 32 A........................... TGATGGTGCAGGAACCACAGCAACATCAGTCA 80927 28 100.0 32 ............................ GATTGAAATACTATTAAGGCTGTTCGTAAAGC 80987 28 100.0 32 ............................ ACACACGCTGCCAATTCTTCGTTAGAGTGTAT 81047 28 100.0 32 ............................ AGCAGTAAAAGCCATGACCGTTAAGATCGCTC 81107 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================= ================== 91 28 100.0 32 GTTCGTCATCGCATAGATGATTTAGAAA # Left flank : ACGTTGGGCCAAAGCACTGTATAAAGAATTGGCCAAAGGATTTAATATTGACTTTAAACGAGATGAAGGCAAAAACTCACATGATAGTCTTACCGATATTGCGAATAACTACTTAGATCATGGAAATTACATTGCCTATGGCTATGCGGCAGTTGCTTTAAATGGTATGGGAATTAGTTTTGCCCTACCTATCTTGCATGGTAAAACACGCCGCGGAGGTTTAGTGTTTGATCTTGCCGACTTAGTGAAAGATGCTTTTGTGATGCCAACTGCTTTTATATGCGCATCAAAAGGATTAAATCAAAAAGAATTCCGAATGCAACTTATAGAAATATGCCAAGACCAAGATCTTCTAGATTACATGTTTAGCTTCATTACTGACATATGTAGTAAAATCAAATAAAATCAAACAATTAACTCAAGTGATTCATAACGAAGTATTTTTACTCATTAAAAGCTTATATAATTGATATCAAGGGTTTTGTTTTGACTTAACTCTA # Right flank : ATATTAAAAGCAACATCGATAAGATCTAGCTGTCCAAACTATCAAAAGTTGATTCAAAACTAACTTTACTTCAAATTTTTTTACAGACTCTGATCTTGTACTAAACTATTCATATATGCCACCGCAGCAGTACGGTTTTCGACACAAAGCTTTTCAAAAATATGTTCTAAATGTTTATTCACCGTTCTTGGGCTTAATTCCAAAATCTCGGCAATGTCTTTATTGGTTTTACCCAGTGCAAGCCAATGCGATACTTCGGCTTCACGTTGAGTCAATTGCGGGCAGTATTTTAAAATATCTTCTATACTCAATGCTGTACTGGAAATTTTGATTTGCACCAGATAATTTTTGGTCGTGCTTAAATCATCTTGCCAAGGGGTCAAAAGAATTAACTGAAGTTGCTGTGTCGAGGTAGAGTAAGTACAGCTCATACGTTTTTTATTGTCTTTGTCTTTTTTAATGTCTGCAAACCATTGCTTTAAGCCCAACTTAAAGCCCGA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCGTCATCGCATAGATGATTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:64.29%AT] # Reference repeat match prediction: F [matched GTTCGTCATCGCATAGATGATTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-4.70,-3.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [76.7-70.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 53-261 **** Predicted by CRISPRDetect 2.4 *** >NZ_MPVV01000044.1 Acinetobacter baylyi strain XH444 XH444_contig_46, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 53 28 100.0 33 ............................ CGACAGAGCAAGACATCACTGATATGTCGAATT 114 28 100.0 32 ............................ GCAGTCGGACAACTTCAATCGAACGCATCATC 174 28 100.0 32 ............................ CTGCTTCTCGGTCATCCTTAAATCTGAATGAG 234 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================= ================== 4 28 100.0 33 CTTCACTACCGCACAGGTAGCTTAGAAA # Left flank : CCGCACAGGTAGCTTAGAAAAATGTCGTGAACACTCAGACAGGCGGATACCAC # Right flank : TCACACTGCACTTGCGATTGG # Questionable array : NO Score: 5.86 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTCACTACCGCACAGGTAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: F [matched CTTCACTACCGCACAGGTAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-6.00,-5.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [43.3-16.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.14,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //