Array 1 253727-262984 **** Predicted by CRISPRDetect 2.4 *** >NZ_HF545617.1 Ruminococcus bicirculans strain 80/3 chromosome II, complete sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ===================================== ================== 253727 32 100.0 35 ................................ TGTAAAAGCTGTTGTTGAATTTCTGTGGAACGCTT 253794 32 100.0 34 ................................ AACAGCGGTTTCAGTATGAAAGAGGTTTCGGAGT 253860 32 100.0 34 ................................ GATGATGTTAGCGGTGGTGGTTCGTCTAGTAACG 253926 32 100.0 36 ................................ TTTCAAATGGGATTGGTCTTACGCCGTTTTCATATT 253994 32 100.0 33 ................................ ATTAATGGAGAGCAGGGCAGTGCAGGAACGAGA 254059 32 100.0 33 ................................ TTCTGTATCAGCTTGACCAATTCTTAAATCTTG 254124 32 100.0 33 ................................ GAAATACCTTAAAGAAATTAAAACTAATAAGAC 254189 32 100.0 34 ................................ TGCTGGTACTGCAAACACGCAGTGCCAAAGAGCG 254255 32 100.0 33 ................................ AAATTTGTACATATTTGTACCCAATTTGGGGTT 254320 32 100.0 34 ................................ ACACGCCCGATGAATTCGGTTACGATTGAGCGAG 254386 32 100.0 33 ................................ GTCATGTAGAGGACCGAAGCCTATTGCGTGTTT 254451 32 100.0 36 ................................ GTGTTGATTTTTTGTGCAAATTATCCATAAACACAC 254519 32 100.0 35 ................................ TTTAATTAAGTATATTAACATATCCATAAAACCGC 254586 32 100.0 34 ................................ AGCCTGGATAAACGCATTCCGCAAAAGATAGTTA 254652 32 100.0 33 ................................ TACCAATCACAAAACAAATAAGTTTACTGCTAA 254717 32 100.0 33 ................................ AATTTAATTGTTTAATTTGTTTACTATTTTTAT 254782 32 100.0 33 ................................ TGATTCAGTTCTGGAATTTGCGGATGCTCTTGA 254847 32 100.0 35 ................................ ATATAACCGCCCTATATACTCAAAATGACCACATG 254914 32 100.0 34 ................................ ATATAAATAATTGTATCATAATTCATACAATGTT 254980 32 100.0 34 ................................ GAAACGTTTATAAATGTGGGCGGTCATTCATGGC 255046 32 100.0 33 ................................ TATAATATTTGATTTTTATCAATTATTGATTAA 255111 32 100.0 35 ................................ CTATACGCTCAATAGAATCATCGGCATCAAGATTT 255178 32 100.0 34 ................................ GACAAATATGTTATTTGCGGCTATAGAATCCCGC 255244 32 100.0 34 ................................ ACTAAAATACGCCTAAATTTTAATACTCAATCCC 255310 32 100.0 33 ................................ GTATCAGAGCTTGCGGTGATCTTGCGGAAATTT 255375 32 100.0 34 ................................ GATAATTGCAATTTGCTTTGGCGTAAAAACCTTC 255441 32 100.0 34 ................................ AAAACCGATTTCCGAACCGATAGCCACGCCCATG 255507 32 100.0 33 ................................ TTCCGCTTTTTAGTATTAGCAGTAAACTTATTT 255572 32 100.0 33 ................................ AGATCCATATTTAATTGTTTAATTTGTTTACTA 255637 32 100.0 34 ................................ AATGCCGCTCTGATTGTTGCCCACGATCATGACC 255703 32 100.0 34 ................................ TTTTGACAAGCTGTATAAGGCTACACCTGACGAG 255769 32 100.0 35 ................................ AACAAATTCCGATTGATGAGGTTTTCTATACCCAC 255836 32 100.0 37 ................................ GACACAACAGGGCTAAAACGTGGTGATAATAATGCAG 255905 32 100.0 33 ................................ AGCGTATCTTTACAAGAATGGTAAATGTAGAGG 255970 32 100.0 34 ................................ GTATGGTCTGCAATGCCAATCCGAGAGTTACAAG 256036 32 100.0 34 ................................ GATAATTGCAATTTGCTTTGGCGTAAAAACCTTC 256102 32 100.0 34 ................................ TAGTATCATCTCTTGCTAGGTTTGGCTGTACACG 256168 32 100.0 35 ................................ GACAGGTTTTCACCTGATGATTTTGATATCATCAT 256235 32 100.0 34 ................................ GTAAAGGAAAAACGCTGAGGATATCTGCACCCGA 256301 32 100.0 34 ................................ ATCTTTGCGGTATCTGTAGAACAGTGCTACGAGA 256367 32 100.0 34 ................................ GCTGCATAGGCATTTTCTGTCCCTGCCATATTGC 256433 32 100.0 33 ................................ TATATTATTTGATTTTTATCAATTATTGATTAA 256498 32 100.0 35 ................................ CACATTAACCGATAATTTTTTGTAATTTTTGGCAG 256565 32 100.0 34 ................................ TTGTTCTACTGTTCTACACTTGACTTTTTATTTC 256631 32 100.0 35 ................................ TTTTCATTTTAGCTTTTCCGCTTTTTAGTATTAGC 256698 32 100.0 33 ................................ TTTGGTTTTTGGTTTATTCCCTTCCCTTACTGT 256763 32 100.0 33 ................................ TTTATTTCTTTTATGTTATCCTAAAAATATGGT 256828 32 100.0 33 ................................ TTTGCCAAAATCACATATATAAATAATTGTATC 256893 32 100.0 35 ................................ AAAATATAAGCATACAATATATTGTATATAGCAAG 256960 32 100.0 35 ................................ GACTTTTTATTTCTTTTATGGTTGATTAAATTCAC 257027 32 100.0 35 ................................ TTATGTTATCCTAAAAATATGGTTGATTAAATTCA 257094 32 100.0 36 ................................ TACCGATCACAAATAAGTTTACTGCTAATACTAAAA 257162 32 100.0 34 ................................ AAAATGTTTTTAATCCAGTTTTCCGAATTTCTGG 257228 32 100.0 34 ................................ AAAGCCATTCCGTCAGAAAGGGGTACAGGTCGCC 257294 32 100.0 33 ................................ TTAGAAAAGGGTCATTGAATTTCTCAAAGAATA 257359 32 100.0 33 ................................ CTCTTGATAATGTTACGGTATTTAAACTATTGG 257424 32 100.0 33 ................................ CCGAATTTTAAAACCCCCTGCGGGGGTTATTAT 257489 32 100.0 33 ................................ GACCATAGGCGGCTGATTGGTTTCGGCGGCTGT 257554 32 100.0 34 ................................ GCGGCATTAACGCCGCCGAATAGGTTAGCAATGA 257620 32 100.0 33 ................................ GTTTCCATATGTTCCCATAAATGTAAAGTCACC 257685 32 100.0 33 ................................ TATAATATTTGATTTTTATCAATTATTGATTAA 257750 32 100.0 34 ................................ TACTGTATCTATAGTATACCATATTTGTAGCTAC 257816 32 100.0 33 ................................ AATCATCATCTTTAAAATTTGAACATTTTATAT 257881 32 100.0 35 ................................ CGCAACTTCTGCACAAGCGTGTTCAGCTGAGCCAG 257948 32 100.0 33 ................................ CGATACTCCGCGCTCACGCTTGGGCGCGCCGCA 258013 32 100.0 36 ................................ CTATTGCGTGTCGCTCCTGTTGGTCGCTCCACGCCG 258081 32 100.0 34 ................................ TCCGTTATGGTTTGCGGATTGACGACGTTCTTCA 258147 32 100.0 33 ................................ GATAATCTTTTACCATAATTTTGTAAGGCTCGT 258212 32 100.0 34 ................................ TTATGGATAAGGACTTTTTGAGATACGCAATAGG 258278 32 100.0 35 ................................ GATAGAGATAAGAAGCCATGTGATATTGGCTACAT 258345 32 100.0 33 ................................ GTGAAGCTGAGTGGCTATTCAGAGGTTCCCTAC 258410 32 100.0 33 ................................ TTCTAAAATTTTGAAAATCCCCATACATACACG 258475 32 100.0 34 ................................ ATCCATAAGAGCATGAGCCGCTGTTAGAGTCTGT 258541 32 100.0 34 ................................ TCAACATCCGCTGAAATTATATGATAGTATCTAT 258607 32 100.0 34 ................................ GGCACGTTTCGGACGAGCTGATAAAGGCGTTTGA 258673 32 100.0 33 ................................ TTATTGACGATGGCAATTTTGAGGAAGCTGAAA 258738 32 100.0 34 ................................ CTATGGGCGTTCTGAAAGTCTATTTGTATTCGGA 258804 32 100.0 33 ................................ TTATGGGGATTGATGAAGATCTGCGTATAATCG 258869 32 100.0 35 ................................ CATGATAGGTTTTGTCAGTATAGTCAAACAAATTC 258936 32 100.0 33 ................................ GCCTGTGGATTGATTTCACCATAGTTTTCCAGT 259001 32 100.0 33 ................................ GTCACGGGTGACTATTTTCACAGGCGGTAGCGT 259066 32 100.0 35 ................................ TGATAGATTTCAGCCGTTTGGATATCACGTCATTG 259133 32 100.0 33 ................................ TGCCGTCTTGGTCTCTTAGCTGGATTTCACCGC 259198 32 100.0 35 ................................ CTCATTGAGAGCAAACCGATAATGAGACAAGACCA 259265 32 100.0 35 ................................ GTGACTGTGTTACAACAATTTTATTAGTTGGTTCA 259332 32 100.0 36 ................................ ATGCAGATCCAGTGTGAGCGACCCGAAGCCATACGC 259400 32 100.0 35 ................................ ATTTTGCCTATTGCACAAAAGTTTTATGGGTGGAT 259467 32 100.0 33 ................................ TGTAGCCTGACGGAATTTTCTTCTTCATATCCC 259532 32 100.0 33 ................................ GTAAAAATCACGTTCGCCAAACTTGTCTGCAAA 259597 32 100.0 33 ................................ AGTTTTCAAAAAATGGTAAAGTCTAATGTGGAG 259662 32 100.0 34 ................................ AGTTGTTATTGCAGCCTCTCCGATTATTTCATGC 259728 32 100.0 34 ................................ TTTTACAAAAATAGTTGCAACTATTCAAGCATTT 259794 32 100.0 34 ................................ TTCCTCTGCCAAGTCTTTCCATTCTTCCGAAATT 259860 32 100.0 33 ................................ AAATTATTTACAGTTTTTACATCGGCTGAAATG 259925 32 100.0 33 ................................ TTTTTACAGTTATGACCAAAATTACAATGGGCA 259990 32 100.0 33 ................................ GCTGATTGCGTGGTCACAATTTCCAGTGCATTG 260055 32 100.0 34 ................................ AAAATGCGTATGCACCTGTATCCCTGCCACAAAT 260121 32 100.0 34 ................................ TGTCATTGGAATATAACCCCATAGAAAACTACTC 260187 32 100.0 34 ................................ GAGTATACATTCTTTACACAGGCATTCTCTACGA 260253 32 100.0 34 ................................ CCTTTCCCCTCTTCCAGCCCAGGGTGCATACCCT 260319 32 100.0 35 ................................ GACCAATTTATAACACAATCCCGAATAATGGACTG 260386 32 100.0 33 ................................ TGTCTTTCCCTCGCAGAGCCTTGTGCCTCTGCC 260451 32 100.0 35 ................................ GCACTGTCAGCAGATTTGCCAGCTTCTTTTGCATA 260518 32 100.0 35 ................................ CGTTCAATCTCACCAATGTTCGCACAGGGCGAACC 260585 32 100.0 34 ................................ ACAGTATTTGAGCATTTCATCAGCTATCTGATAA 260651 32 100.0 33 ................................ CTATTTTGGAACACAATATTCAAAATCAAGTGA 260716 32 100.0 34 ................................ TGCGATCTTAGCGGCATGGTCTGCCACTGTAGCC 260782 32 100.0 33 ................................ TTCACGTACTGGCTATAGCCTGTATGCCATGTG 260847 32 100.0 34 ................................ GCCAGTTATCGAAATGCGGCGGCGTTTTCCTGTT 260913 32 100.0 35 ................................ GAGAAGCGAGTGGCAGAACACAACAATTTTGCAAG 260980 32 100.0 34 ................................ GCTGTCAGAATATTCAAGTGCAAGTGTTAAATCA 261046 32 100.0 34 ................................ TTAGCGTTGTTTTGTCATTGTAAAATTTTAACGC 261112 32 100.0 34 ................................ AAACATTTGTGCGTGATATGGTAACAAAGGGTTT 261178 32 100.0 34 ................................ GAAACGTTCATGACCGATTAGAAATTGGAACTCA 261244 32 100.0 34 ................................ CCGATATTTTCATTTCTAGTAACTAAAAATTCGC 261310 32 100.0 34 ................................ GCACTGTCATTTCCAGTCATTGGAATTGATATAC 261376 32 100.0 34 ................................ TGGTTGCGGGAGCTGGATTTGAACCAACGACCTT 261442 32 100.0 33 ................................ TCATTTCAAGAGCCTTTGTACTGTTGACAAATT 261507 32 100.0 36 ................................ GCGAAAACGTCCTTAAAACGTTCATGACCAATTAGA 261575 32 100.0 34 ................................ GGACGTTTTACGATGGCGTGTAGCATATGACCAA 261641 32 100.0 35 ................................ ATGGCAAAGAGGGAAAACCTTGAAAATATCGATAT 261708 32 100.0 33 ................................ AATCCATTCGGCTAATCTCGGGAAATCTGCACG 261773 32 100.0 33 ................................ TATTTTACAAAGCCTTGCACTTCGGACGAGTCG 261838 32 100.0 34 ................................ CGGTTGCAACGTGGCAACCACAAAAATGCTATTT 261904 32 100.0 33 ................................ TGTTTATCTCGTCAATACAATTTTCGTTATATT 261969 32 100.0 33 ................................ ATTAATCTTTTTTAGTGAATAATATTCATTTCT 262034 32 100.0 35 ................................ TAGTATAGTAAAGTGTTAAAGCGGTGAAGCGAGTA 262101 32 100.0 33 ................................ TCATTTCAAGAGCCTTTGTACTGTTGACAAATT 262166 32 100.0 33 ................................ AACAGCCCCTGACATTTTGACAGATAGTTGGGA 262231 32 100.0 33 ................................ GACAGAGATAAGAAGCCGTGTGATATTGGTTAT 262296 32 100.0 34 ................................ TTAAATCCTTTACATGAGTTTTTGTAAATGGTTG 262362 32 100.0 33 ................................ GCATGGTATGTAATGCAAATCCGAGAGTTACAA 262427 32 100.0 33 ................................ TAAATATATACTGTTTGACGAATTTATGACCCG 262492 32 100.0 34 ................................ TGCGTGTCAGCTGTCAGATCGTGGGGCGTGCATC 262558 32 100.0 33 ................................ TTAATTTATTCAAAGTAAAGTCAAAATCTTCCC 262623 32 100.0 34 ................................ TTTGGGGATATACATTTCATTGTCAAAAAATTCA 262689 32 100.0 35 ................................ ACTCTGTCAAACGATATACTTAAAACAAGAACCAT 262756 32 100.0 34 ................................ ATATTCACGGCTCCTGCGGGCATACTAGCCCTTG 262822 32 100.0 33 ................................ AACTTTCCTAAATTTATAGCACTTCTGCCGCGC 262887 32 100.0 34 ................................ GTAGTACAGCATTACGCCTGACATTGCCTGCTTG 262953 32 96.9 0 ...........T.................... | ========== ====== ====== ====== ================================ ===================================== ================== 141 32 100.0 34 GTCACGCTCCACGTGAGCGTGTGAGTTGAAAT # Left flank : GGCGAGCTAGATGAGTACCCGAACTATTTGCTGAAATAGAGGTGATATAAATGATGACCTTAGTAAGCTATGATGTATCAACAACAGATAATAAGGGTAAAACAAGGCTGAGAAAAGTGTCGAAAGAGTGTCAAAATTATGGACAGCGAGTGCAGAACAGCGTGTTTGAAATAGACGTAGACTATGGCACTTTTCTGAAAGTGAAAGATAAACTTCTGAAAATAATAGACCCAAAGCATGATAGTCTGCGGATATATTACTTAGGCAACAATTGGAAGCATAGAGTAGAACACTACGGCACCAAAGAGACCTATGACCCCGAAGGTGTCCTAATATTTTGACCTGCGTACCCCAAGTGATCCACAAATCCCTAGTAAGTTCGCATGAAAATGCCATGCTATTTATGAATGCACAGTGAACAAAATCAAACCGATACCCATTAAATAAAAAAATAAGTCCGCATCACGTTGAGCAAGCACCAGATATACACAACATCAAGT # Right flank : TACGATAATGTAAAAAAAAGAGAGGTATCATGCAATGATTAAATTATTTTTGAAAGAATACTTAGATGAAATGTCAACTGTATGTAGGGATAATCAGAATAATGTAAGTATCGCTGTAAATCCCGATTCTGAAAGGCAAGGACATCCTTATTTCAAATTTTATAATAACGTTTATTATGGATATGCTGCTAAGGTGGTTAGAATTTTATTTAATTCAGCAGATTATGTTGATAATAAAAATGCAGAAGACCAAAAGCTTTGGAAACTTTCGCATAAAGAAAAAAAGTTGCTTAAAGAACTTTTGAGTAGTCCTTCTGCAGAATATTCAGATATGACTATTTGGGAAGCTTGTAAATTTGAGTGGAACTTTGAATATTTAGAGCAATCTATTAACTTAGATAAATATGTAAATGGTGAATATGATAAGGATAAAACATTCACAGAAAATCCTGGCTATGTACCCTACAGTTTGGAAATGCCTGATTATTTAGAATTAAACT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCACGCTCCACGTGAGCGTGTGAGTTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [7,8] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCACGCTCCACGTGAGCGTGTGAGTTGAAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.70,-7.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [65.0-76.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.64 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //