Array 1 5278-4829 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAANZQ010000053.1 Enterobacter kobei strain U119_10 contig00053, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 5277 28 100.0 32 ............................ GAAAAGAGTTATGTCACGATGATTAAGAGTCG 5217 28 100.0 32 ............................ ATCGCCGGGGCCGACTGCGTCATCGTCTGCTC 5157 28 100.0 33 ............................ TCATGACGTGAAGGTGGTTTGTTGCCGTGTTGT 5096 28 100.0 32 ............................ GAACCACGGATGGATAAGCTCGCCCGGGCCGG 5036 28 100.0 32 ............................ GGAATACTTTCAGGATTCGAGCCGGGGATCCT 4976 28 100.0 32 ............................ GGTATCTTTCCGCGCACCACGTCGCGGGCGTA 4916 28 100.0 32 ............................ GTCTTTTGCCCGCATATGCGCGTTTTTATAAT 4856 28 75.0 0 ..........A....C.....AACC.C. | ========== ====== ====== ====== ============================ ================================= ================== 8 28 96.9 32 GTTCACTGCCGTACAGGCAGCTTAGAAA # Left flank : ACGGTTTGCACAAGTTATTCGGCGGCGTGGGCTTTATCAGCGGCATGCTGGTGGAAAAAGGGTTACCGGGGTTTATCGCCTATGGCGTGTTGATTGGCGAAGTGGTGGCACCGATGTTGATTATTGTCGGCCTCTTTACGCGCCCGGCCGCGCTGATGCTGGCGTTTACGATGATTGTGGCATGGCTGATGGTAGGAATGGGTGAAACGTTCGCCCTCGATAAGGTTGGGGCATGGGCGATTGAAAGCCTGGTGTACTTCTTTATTGGCTCGCTGGCGGTGGCATTTTTAGGGGCAGGGCGGTTTGCGCTGGGGAAAGCACCGGCGTGGCGTTGAGGTTTGGGCTCTGGTATGAAGGAAAGGGTCTATGGACCCTTTTTTATTGGCTGTTTGTAACTTATTGATTTTATTGTGCTGAAATGTATGTGAAGAAAAAAGGGATCGAGACGATTTTTTAGGTTATTTCTTTATCTGACAAAGTGATAGGTGTAGATTGTTCCA # Right flank : TGTAGTTCGGCACAAACACTGTGCCGCCTGATTATAAGCCCGGTGGCGCTAGCGCTTACCGGGCCTACGACGATCCAGCCCCTACAAGGTAGGCCGGGTAAACGCAGTGCCACCCGGCAAAAACGGGGCACCGCGTCAGATTATGCGAGGACCAGATCCCCCTGCGGATGGCATGAGCACGCCAGCACGTAACCTTCGGCAATTTCCGCGTCGGAGAGCGTCATGGTACTGGTGACAGTGTATTCACCTGAAACCACTTTCGTCTTACAGCAACCGCATACGCCCGCACGGCAGGCGGCCACTACCGGCACCTTATTGCTTTCGAGTGCCTCCAGCAAAGTCGTTCCCACGCGGCCAAAGAAGGTCTGCGCAGGCTGTAGCTTAGTAAACTGAATCCCGCTGGTTGCCGCCTCCGCTACCGGCGTGAAGAATTGCTCCTTGAAGAAGCGGGTCACGCCAAGCGCCTTCACTTCTTTCTCGACGATATCCATGTAAGGCGC # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACTGCCGTACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [55.0-66.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.41,5.51 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 442521-441772 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAANZQ010000001.1 Enterobacter kobei strain U119_10 contig00001, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 442520 28 100.0 32 ............................ ATGAAACCAGGGCGGCGACCGCTGGCGCCCGG 442460 28 100.0 32 ............................ GCTTCATGACTTCACATCACACGGCGCTGACA 442400 28 100.0 32 ............................ AGATACGAAATCAGTACCCCACCACCGTACAC 442340 28 100.0 32 ............................ ACATACACAATCCCTGTGGGGATTAATTCTGG 442280 28 96.4 32 ............G............... TACATCGCTGAGATTGCCAAGAATACCCCAAG 442220 28 96.4 32 ............G............... TGTGACACTAACTTCACAGCGCAACACCTCTC 442160 28 96.4 32 ............G............... TCTATAACCTGGAAGAAGGATTCGCAGTGGTT 442100 28 96.4 32 ..G......................... AACATTCGGCGAGTGTTCTGATGAATGGGTCT 442040 28 96.4 32 ..G......................... GGGCCGCCCCTTTCCACTTCTTCATCAGCGAT 441980 28 96.4 32 ............G............... TATCGTGCTGACTTTGAGGATTTGCCGACCAT 441920 28 96.4 32 ..G......................... ATCATCCCGGGTCAGCTCGTCACCAGCCGGTA 441860 28 96.4 32 ..G......................... TTAAATGCGCAGAAGTCACCGAAGTTGTTCAG 441800 28 89.3 0 C.C............C............ | C [441775] ========== ====== ====== ====== ============================ ================================ ================== 13 28 97.0 32 GTTCACTGCCGTACAGGCAGCTTAGAAA # Left flank : CCGCAACACCGCCGTAGCCTGCCACTGGTTGAAAAAAAACGGACAAACCGAGCTGCTGTGGATTGTCGGGAATTTGCGACGCTTTAACGCGCAAGGGCGCGTGCCAACCAATCGCACGACCCTGCAAATTATTCGCAATGACAGCGAACATCGTTGGCAGAGTGCGGAAAGTATCGCCCTGCTGGCGGCGATCGCCGGGCTGTTTCATGATTTTGGTAAAGCGGGGATGTGCTTCCAGCAGACGCTTAAGGGAGAAAGCAAGCATATTTGTCAGCCGTACCGTCACGAATGGATCTCGGTTCGTCTGTTTGAGGCCTTTGTCGGGGAGCAATCCGATGCGCAGTGGCTGACATCGTTGACACGGCTTAACGTTGCTGACGAAAAGGCCATGCTGAAAGCGCTGAAGATGGACACAGACAAGAACTGCAGCCTTTTGGGAAATCTCCCGCCTCTGGCGAAAGTGGTGGTATGGCTGATATTGTCGCATCACCGTTTACGGA # Right flank : ATAGAAAATAAGGTCTCCCCCTCCTTACTTTCTACACTGTCGAGCCGACAGCCCCGCAGCTGAAACGAACCGCCAAATAATTGTTCAAATAATCGACTGCGCCACAAAAAAATAAGGCCGGGAAAATCCCGGCCTTATTTAATATTCATCTGCCATTACAGGCGAAAACAATTAGCGACTACGGAAGACAATGCGGCCTTTGCTCAGGTCGTACGGGGTCAGTTCAACAGTCACTTTGTCGCCCGTTAAAATGCGGATATAGTTTTTGCGCATTTTACCGGAGATGTGCGCAGTTACCACGTGACCGTTTTCCAGCTCTACGCGAAACATGGTGTTAGGCAACGTATCAAGTACGGTACCCTGCATTTCAATATTGTCTTCTTTGGCCATCTAATCCTCTGGGGTATCACTACCAAGTTTTGAACCGGCAAGATAATGCCGAAATTCATCAATTAAGTAAAGAATTGCGCGTTTAAAACGCAGCAAAACAGTTTCGGCGC # Questionable array : NO Score: 5.60 # Score Detail : 1:0, 2:3, 3:0, 4:0.85, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.49, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTACAGGCAGCTTAGAAA # Alternate repeat : GTTCACTGCCGTGCAGGCAGCTTAGAAA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACTGCCGTACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [5-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [46.7-46.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.65 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 2 445124-444436 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAANZQ010000001.1 Enterobacter kobei strain U119_10 contig00001, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 445123 28 100.0 32 ............................ GTTAAAGAGCCTTACTATGGCAACGTAGCTAC 445063 28 100.0 32 ............................ GGCTGCGGGTCAACCTGCTGTTGTTAAGCATA 445003 28 100.0 32 ............................ CTGGCACGGTGATCGGCTTTGGCTCCCGTAAA 444943 28 100.0 32 ............................ CCGAAATTTACCGAGGCGTTAAACTGCTGAGT 444883 28 100.0 32 ............................ AGTCGCAAAAGACGCGCTCGTTCTCTGGAGTG 444823 28 100.0 32 ............................ TGTTGTGTCATCACGACCTTGAGCATAAAAGT 444763 28 100.0 32 ............................ AGATTGCGAAATGCATCGCGGAAACGTGGGTT 444703 28 100.0 32 ............................ TGAAGATGGGCTATGCAGGGGAAAAGGGATCA 444643 28 100.0 32 ............................ AGAAACAGTCGTCATAAGTGCGGCCGAGCCAG 444583 28 96.4 32 .........T.................. GACAGCCAGGTAACGAACGCCACCAATGATAT 444523 28 92.9 32 A..............T............ ATCGAAACGAAGCATCGACAACTGAGCGAAGT 444463 28 71.4 0 ...........C.........ACCTCTC | ========== ====== ====== ====== ============================ ================================ ================== 12 28 96.7 32 GTTCACTGCCGTACAGGCAGCTTAGAAA # Left flank : CTCCCGCAGACGCAGCCCGTATGCCGTTGCCTTGGTGCATACCTGGAAGAAATGAAAACCGGCCTCACAGAATCAATGCGTGACTTTCAGGTGGTGGAATTTGAGAACGAAGCCGAACAACCGCGACAAAAAGAGTGGCTGCTCGAAGATACAGAAACGAAATGCGACTACTGCCGGGCATTAAACCATGTGCTGCTGGTATCGCATTTTGACCGCGATATGTTGCCGCACCTGACAGGATTACTGCATGACATCACGTATTCAATGGCGGCAGATGTGGTATCTCCCCATGATGCTGGAACGGGAAATTCTGTTATTTCTTGAGTGGAGTGCACACCGCCAGGGGCTGTCCCCTGGCGACAACGGAGAAACCCTTTTTTTGAGATGCTTTATAACTCATTGATTTATAATGTTTGATTTTACGTTGCAGAAAAAAGGGTTCAGCCTGTTAACGTTGCTTAGTTGCCTTAATAACAATAAGATAGCGCTGTTTTCTTCCA # Right flank : AAACCAACCCACTGTAATATTCACCAAACCTATTTAAAACCTTATACCATCCAATCTGCACTCTCTATTTTCACAATAGATAAAAAACCTATTCACGCATAAATTATATTCCAGCAAATATATTATTCGTAAAAATAATATATTGTCATGAAAACATGATTTCCCACTTTATTACCACGATGATTATTATTCATTTGATGTCCGTCACATTTGTTTTCATTCGTTCTTCGCTAACATACTGTGCATTCAACACCTTGAAATAAAAGCCCTTGCCATGTCCGTAAACAGCATCACCCCTACAGACTTAAAAACCATTCTGCATTCAAAGCGTGCCAATATTTATTACCTGGAAAAATGCCGCATTCAGGTGAATGGTGGCCGTGTTGAATATGTTACCCAGGAAGGAAAAGAGTCGTTTTACTGGAATATTCCTATCGCTAATACTACGGCGGTGATGCTGGGAATGGGAACCTCCGTTACACAAATGGCAATGCGGGAGT # Questionable array : NO Score: 6.10 # Score Detail : 1:0, 2:3, 3:0, 4:0.84, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACTGCCGTACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [11-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [65.0-61.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.65 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //