Array 1 79678-82756 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP087719.1 Roseomonas sp. OT10 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 79678 29 100.0 32 ............................. GCGCAGTACGCCACCTATCTGCGCGAATTGGA 79739 29 100.0 32 ............................. AGCCTGATCGCTCGGGAGAGCGCAGAGGGCGA 79800 29 100.0 32 ............................. CGCAAGGGCGCCGGCGGCATCCGCCTGCCTCG 79861 29 100.0 32 ............................. ATCACGGCGCTGGAGGCCAAGGCTCTGGAGAT 79922 29 100.0 32 ............................. GCCGGGCGGATCGTGGGCCGTCAGGTCAGGAT 79983 29 100.0 32 ............................. AGTGCGCGCGGGAGCGCGAGGCGGAGAAGGCA 80044 29 100.0 32 ............................. TTCGCCAGCAGCGTGTCCGCCGACGCCTCGGG 80105 29 100.0 32 ............................. CCGGTGCCGCCCGAGCTGGCCGAGTGGCTGCG 80166 29 100.0 32 ............................. CGCCGCATGCCCGTCTCGCCGCCGAGATGCGC 80227 29 100.0 32 ............................. GAGAGAGCCGCGCGAACGGCGGCAGCATGGGC 80288 29 100.0 32 ............................. GCTCGGGTTGCGGAGAATCTGCCAGGAATCCC 80349 29 100.0 32 ............................. GCGTGGCAGCTCCATCACGGCATGCAGGACGT 80410 29 100.0 32 ............................. ACGAATATGGCGCGCAATATAATCAATCCCTT 80471 29 100.0 32 ............................. TCCGTCTTGCCCGTGGCGGCGGACGTAACCAT 80532 29 100.0 32 ............................. CCCGGGGCCTCCCCGGATGCCAAGCAAAAGGC 80593 29 100.0 32 ............................. CAGCGGGAGGATGAGGAAAACGACGGGTGGAT 80654 29 100.0 32 ............................. CGACACGAGCTGCGAAGGCGCCTTCGAGAGCA 80715 29 96.6 32 ............................A AGCAAGCGGCGTCGATCACGCCGACAACAGGC 80776 29 96.6 32 .......T..................... CCTTGGCCAAAGCCCTCGACAGGCAAGCCATG 80837 29 100.0 32 ............................. GGGCGGTGGTTCTGGGAGCCGCCTGCTCGGCT 80898 29 100.0 32 ............................. GACAGGACACGAAGCTCCACCGACACCACGCC 80959 29 100.0 32 ............................. GTATAGGTGGCCGCCGTGGCGCCGGAGATGTC 81020 29 100.0 32 ............................. GCCTCGGAGATGCGCGAGCGGGGCACGGCGAC 81081 29 100.0 32 ............................. GAACTCTCGAACAGGCCGTCGAGCAGGGAGGA 81142 29 100.0 32 ............................. GCTGTCCAGGGCGCTCCCGTTGCTCACGGAGC 81203 29 100.0 32 ............................. ACCGGGTTGGCGGCGTTGCTCTGGATCGTGGC 81264 29 100.0 32 ............................. CTCACAGGTCTTCGTCGTTCTCGATTCCGCCG 81325 29 100.0 32 ............................. GCACTGCGGCTGCTGTTCACCCCGGGCGGCAG 81386 29 96.6 32 ............................C TCACCACCACCGCCACGACGCGAACCCAGTCC 81447 29 100.0 32 ............................. GTCAGGGCGGTCACGGCGGTTTCCATAGGGGG 81508 29 100.0 32 ............................. GTGCAGTGGTGGCTCGCCCAGTTGGATCGCTA 81569 29 100.0 32 ............................. AACGGCGGCTTCATGATGGACCGCTGGCGCCC 81630 29 100.0 32 ............................. ACCTGGGGAGATCACCCTCCGGGCCGCCCGGG 81691 29 100.0 32 ............................. ACCTGGGGAGATCACCCTCCGGGCCGCCCGGG 81752 29 100.0 32 ............................. GTATGGCCCGAGGGGGCGGTCAGGCGCGTATC 81813 29 100.0 32 ............................. GCCCGCGCCACCGCCTCGGTGACGCCCCACAT 81874 29 100.0 32 ............................. CCCTCGCCCGACACGTCCGGCTCGATGTACGC 81935 29 100.0 32 ............................. CCATCCTCGCGGGGGATTCCGAGGACGAGGAC 81996 29 100.0 32 ............................. ACGAAGTGCGCCCGGATGTCATCGTCCCATTG 82057 29 100.0 32 ............................. GAGGGCGATACGCTCTCCGTGGCCTACGGCAA 82118 29 96.6 32 .....C....................... TTGGCGCCGGCAATGGAATGCACGGAGGTACC 82179 29 96.6 32 .....C....................... GGCGATACCCCTCCGATTCCTGGCATGCCGGA 82240 29 96.6 32 .....C....................... ACCCCCGTGGTGCCGGAGCAGTACAGGCCCCG 82301 29 96.6 32 .....C....................... ACGTTGGTGATCGTGCCGCCGGCGATGGTGAC 82362 29 96.6 32 .....C....................... TTGCCCGCCGCGGCGAGGTCGGGGCAGTCGGA 82423 29 96.6 32 .....C....................... CTGGTCTTCGGGGGCAGGGATCCGGATGCGTT 82484 29 96.6 32 .....C....................... GACTCCGTCTCGGCTGCCCTCGCGGTGCGGAT 82545 29 96.6 32 .....C....................... CTCGCCGCCTACCTGCCGCGGCAGCCGGAGCA 82606 29 96.6 32 .....C....................... CCGCTCCCGCTGGCCGCCACCCGGTACTCGGA 82667 29 96.6 32 .....C....................... TACCAGCGCGCCCGCCCGCAGCCGGCGTTATG 82728 29 93.1 0 .....C......................T | ========== ====== ====== ====== ============================= ================================ ================== 51 29 99.0 32 GTGTTTCCCGCGCTCGCGGGGATGAACCG # Left flank : GTGCTGGGAAAGCTGATCCCCCTGATCGAGGAGGTGCTGGCTGCCGGTGGCCTGCCGTTGCCGAGCGCACCGGAGGAGGCGATGCCCGTGGCGTTCGAGGCTCCACCAGGGTTGGGCGATGCTGGTCATCGTGGTTGAGAACGCGCCGCCCCGTCTGCGGGGGCGGCTGGCGGTGTGGCTGCTGGAGATCAGGGCCGGGGTCTATGTCGGGACCTATGGTCGCCGCGTGCGCGAGATGCTGTGGGAGCAGGTGCAGACGGGCATCGAGGACGGCAATGCCGTGATCGCCTGGGCCGCTCCGACCGATGCGGGGTTCCTGTTCGAGACCTGTGGCCGGAATCGGCGTGTGCCGACGGATTTGGATGGCTTTCGACTGGTCGCCTTCGGGCCGGAGGCAGCATACTCGGCTCTGCCTCCACTACAGCATCGGAACAGGCGTTCCGACCGGTAGATCATTTGACAACCAAATATAGAAGCCAGAACAATTGGTTATAAGAAGG # Right flank : TAATACTGGACTAAGTCTAGTCCGACCTGATATAAGAAGCATATGGAAACCGTCAATATCCACGCGGCCAAGACGCAGCTCTCGCGCTTGGTCGATGCCGCCGCCGCCGGGCAGGAGATCGTGATCGCTCGCGCCGGCAAGCCTGTGGCCAAGCTCGTGCCCCTCGACGGTCCGATAAGGAGGCCGCGGAGAGTGCTGGGCAGCTTGTCCGGCCACCTGCGGGTGCCGACAGACTTCGACGTGCCACTGCCAGACGAGGTACTGGACGCCTTCGGGACGCGCTGATGCGCCTGTTGCTGGACACCCATGTGCTGCTGTGGGCGTTGGCGGAGCCGGGACGACTGGATGCCGGGGTCCGGGCTCTGCTCGAGGACCCGGAGAACGACGTGCTGTTCAGCGCTGCCAGCATCTGGGAGATCGCCATCAAGGCTGGTCTCGGCCGCACCGACTTCGCGGTGCGGCCGGAGGAGGTCGCCAGCGCGGCGGTCGCGACCGGCTTC # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTTCCCGCGCTCGCGGGGATGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [3,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGCTCGCGGGGATGAACCG with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-9.80,-9.80] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [60.0-60.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 3462587-3461399 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP087719.1 Roseomonas sp. OT10 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 3462586 29 100.0 32 ............................. ACCTTCTTCGTGACTGACCTGTCCCTGGCCGT 3462525 29 100.0 32 ............................. CGTGTCGCCTGGGACTACCTCAAGGCGTTGTC 3462464 29 100.0 32 ............................. GCGGCGCTGCGCGAGGATGGCCGGCCCATCAT 3462403 29 100.0 32 ............................. CGCCTCTTCCACCAGGTCGGTCGCGGTTCCGT 3462342 29 100.0 32 ............................. CGATAGGCGCTGCCGCTGTCCGTCGCGAGCAC 3462281 29 100.0 32 ............................. CGTCGCTCATCCATCGCGCGAATGTGGCGCGA 3462220 29 100.0 32 ............................. GTCGGCGGGCCGCTGATCGGCATGCTGGTCGG 3462159 29 100.0 32 ............................. CCGGCGATTGTCTCCGGGCGGCAGGCGGAGAC 3462098 29 100.0 32 ............................. TGCGCCCGGATGTCGTCATCCCATTCCGCATG 3462037 29 100.0 32 ............................. CTGCATCGCGAGGACGGCCCTGCCTACATCGA 3461976 29 100.0 32 ............................. TCGATGCGCATCGTGCAGGTGCCCGCCGACTG 3461915 29 100.0 32 ............................. GCGACGCGGGGCATCAGGCGGGCTCCCGCCGG 3461854 29 100.0 32 ............................. ACCTGGCCGCCTGTCGCGCCGCCAGTGCTGAT 3461793 29 100.0 32 ............................. TGGAAGAATCCAGGCGGCATCAGGCGGACAGC 3461732 29 100.0 32 ............................. GCGAGGGGATAGGGCGCGCAGGACTGGCGCGC 3461671 29 100.0 32 ............................. CACGAGGACTGGCTGCGCGAGCGCAGCGACGC 3461610 29 100.0 32 ............................. GCTGGACGCTTCCCTCCGCGCGCACGGCGCAA 3461549 29 96.6 32 ...........................T. GGGTCGACGACAAGATGTCCTGTGTCGCCGGC 3461488 29 96.6 32 ............................A CGAGTTGGCCGCCGCTCACACGAGTCTCGTAG 3461427 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================ ================== 20 29 99.7 32 GTGTTCCCCGCGCTCGCGGGGATGAACCG # Left flank : CGGCGGATCTACCGCGCCGCCGACATCGCCGTGCCGCCCTCCGTGCATTCCCGGCTGAAGCGGTTCGAGGAGGCGGGGTTCGGCCAGGTCCCCGTCTGCATCGCCAAGACGCAGTACTCCTTCAGCGCCGATCCCGCCGCCCTCGGCGCCCCCACCGGCCATGTCCTGCCGGTGCGCGAGGTGCGCCTCGCGGCCGGCGCCGGCTTCGTGGTGGCGATCTGCGGCGACGTGATGACCATGCCCGGCCTGCCGCGCAGCCCGGCCGCCGAGCGCATCGGCCTGGATGCGGAGGGCAACATCGAAGGGTTGTTCTGATCCCCGGGGCGGGCTCCGGGCCCGGCCATGCGGTGCGGGCGGGGCGCCACGGCTTTGGTCTGGGCCCCGTCGCGCCCGGGGCGGTATGCTCGGCCCGGTCCCCGGTCCGGCTCGGAACGGGCATTCCGATCGGTGGTTCTTTCGGCAACCGAATAGCGATGGCAGAACAGTCGCTTACAGGAAAG # Right flank : ATAAGCCAACGGCCGCCTGGCCGGGACCGGCCATGCGGCGCGGCGGCCGGCTCTTCGCGGCAAAGGCTCGCCCCGTCTAGCATGCCCGCCAGGAAAGAATGCCGGAGACACGTCCATGACCCTTCCGCTGCCGCGGCGCGCGGCCTTGCTGGCCCTGTCGGCACCCCTGGTCCTGCCGCGTGCGGCGGCCGCGCAGGGGGCGGGCTGGCCTGACCGGCCGCTGCGGCTGATCCTGCCCTATACCCCCGGCGGCGGCACGGATGGCGTGGCCCGCACCCTCGCGGCGCGCCTCCAGGCGGAGCTGGGCCAACCCGTCGTCGTGGAGAACCGCCCCGGCGCCGGCGGCAACCTGGCCACCGAGCTGGTCGCGACGGCGAAGCCCGATGGCTACACCCTGCTGATGGGTAACCAGGGGCCCATGACGGTGAACCCGACGCTGTTCGGCCGCACCCTGAAGACCGACCCGGCGACGGCGCTCGACCCGGTGGCGATGGTGGCGG # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCTCGCGGGGATGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,3] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCGCTCGCGGGGATGAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.10,-12.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [21.7-46.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 3 3960142-3964022 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP087719.1 Roseomonas sp. OT10 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ======================================== ================== 3960142 32 100.0 33 ................................ AAGGGCTTCGTGCGCCGGGCTGGACGCGGAGTC 3960207 32 100.0 35 ................................ CAGGCCGAGAACGCGGCGCTGAAGGCGAAGCTGGA 3960274 32 100.0 34 ................................ GGCGGGTGCCCGCTGCTGCCGTCGCGGAGTCCCT 3960340 32 100.0 34 ................................ CGGGGATTGTCGAGGAACCACTCGCGAAAGTCTT 3960406 32 100.0 35 ................................ TACGGCACCTTCACCGGCACGCCCGATACGGGGGC 3960473 32 100.0 35 ................................ GGTAGCCCCCGGTGGCACATAGACCAGATCGGGGA 3960540 32 100.0 34 ................................ CTGTGCCGCCGCATCACTGGCGCAGCCACAAGCG 3960606 32 100.0 34 ................................ CTGGGTCAACGGCTCCGATGCGCGCGTGAAGGAC 3960672 32 100.0 34 ................................ GACTATGAGGACGAGCTGGGCGTCTCGGTCAACG 3960738 32 100.0 33 ................................ GTCATGATCGAGAACAGCCGCATCCAGTCGGAC 3960803 32 100.0 33 ................................ CCCGTGGTACGGCGCGAAGGCGGGCTTCCAGGT 3960868 32 100.0 33 ................................ GGACGGTCAACACCCTGAACCGCGTCGTCTCCC 3960933 32 100.0 34 ................................ TGCCGCACCTGACGCATGCCGCGCCGCCGTGCCG 3960999 32 100.0 33 ................................ TGCTCGTCGCTGTCGTCCTCGACGTTGTAGGTC 3961064 32 100.0 34 ................................ GCCAAGGCCGAGGAGCAGGAGGCGCTACGCTCCC 3961130 32 100.0 35 ................................ CAGCACGCGCGCGAGGTCGCGGCCGCACTGCGGAG 3961197 32 100.0 33 ................................ GTGGACGTGCTGCTCCCGGGCGGGAACCCGTAG 3961262 32 100.0 34 ................................ CTCGACACCGGCCTGGGGAAGACCCTGTGCGAGC 3961328 32 100.0 34 ................................ GCGTCCGTCAGGGCGACGCCGCGCTTGCGGATGG 3961394 32 100.0 36 ................................ ATCCACGCAGCCCACTGCTCGTCGGTCTGCTCGGCC 3961462 32 100.0 35 ................................ GCGGCCCAAGTGGAGACCCGCACCGAGGCGGACAT 3961529 32 100.0 34 ................................ TTGCGTCAATCCCGATCACCTCTTCGCAGGTACC 3961595 32 100.0 34 ................................ AGCCACCCGGGTGGGTCCGGCGCCCGCAGCAGCA 3961661 32 100.0 35 ................................ TTCAGCCGCAGGTAGAGGTCGTTGATGATCGCCTG 3961728 32 100.0 35 ................................ CTGCAGCACGCCCGGCACGCGCCAGACCTCCGCGA 3961795 32 100.0 36 ................................ TTCAAGCAGGTGGGCGAGTCCCACGCTGGCTGGGAC 3961863 32 100.0 37 ................................ ACTTCTCGTAGTAGAAATTGGCCGGCGTGATGCCCTG 3961932 32 100.0 33 ................................ ACCTTGCCCTACAGCGGCCAGTCGAAGCCGATT 3961997 32 100.0 40 ................................ CTTGCGGCATCCGGCGGTCTGCTCGCCGTACCACCGCAGC 3962069 32 100.0 33 ................................ TCGCAGGGCAACCGCGACGCGGCCGAGCAGGCG 3962134 32 100.0 35 ................................ CAATTTCAGGCGGTCAGAGGCGTGCTGGGCACAAG 3962201 32 100.0 34 ................................ CCCGGCTACATCGGCCGCCTGGCCGAGATCAAGA 3962267 32 100.0 35 ................................ CTGGCGGTGTGCCGGGCGCTGCTGCCGCCGCGCCG 3962334 32 100.0 34 ................................ TCCGAGGTGTGGGGCATCGCGCAGGCCAACCCGA 3962400 32 100.0 34 ................................ ATGGTGCGCGAAGCGCCGGAGGCCACCAGCTCGC 3962466 32 100.0 34 ................................ TGTCCGATTTTGTCCAGCCCGGCACCCACCCACC 3962532 32 100.0 33 ................................ CAGCAGTCCCCGGTGCCAGCGAGCGCGGTGCAG 3962597 32 100.0 33 ................................ CTCCCGGGTCCGGGCGACGGCACGGAACTCCTG 3962662 32 100.0 34 ................................ ATCTGGTCGGTCGCCTGCTCGGCCGCGTCGCGGT 3962728 32 100.0 35 ................................ AGCGCACGATCTGCGAAGCCGATGCCGGTGTTGTA 3962795 32 100.0 33 ................................ ATCCGCGAGGCCGTGGATGCGGAACTGGATCGC 3962860 32 100.0 34 ................................ AAGGACATGCCACTTCCCCCGGCTGGGCGGCGCC 3962926 32 100.0 34 ................................ AGGGGTGATGCAGGGGTGACGGCCGCTCAGGCGG 3962992 32 100.0 34 ................................ GGTCATCTGCTGCTGCGACCGCTGCCGGCGTCCC 3963058 32 100.0 34 ................................ AAAATCCTGAGCCCAGGCGGCATGACGATCGGCT 3963124 32 100.0 34 ................................ CATGAGCGGGTGACCCCATGACCCCCCGCGCCAC 3963190 32 100.0 34 ................................ TCCCACTCGCACGTGATCCGATGCGAGCGATGCA 3963256 32 100.0 34 ................................ CGCCATTTGGGTAACGCTCATTGATCTGCCAGTC 3963322 32 100.0 34 ................................ AGCACGGAGGTGATCGTCCCGAAGTTCGGCGGCG 3963388 32 100.0 35 ................................ CTGCTTGCTCGCCTGCGCGAGCCGGGCACCCTGCG 3963455 32 100.0 34 ................................ CGGCTAGGACAGGCGTCACCCTGGCCCAGATGCG 3963521 32 100.0 34 ................................ TCATAGCCGCCCCACCAGCACTCCCCGGCCGAGT 3963587 32 100.0 34 ................................ CTGGACGTGCAGCTCGCGCCCGTGGCGATCGGCG 3963653 32 100.0 34 ................................ ACGACGGACAACCGGTTCGGCCGGCGCGTCGCGG 3963719 32 100.0 35 ................................ CAGATGGCATGGCTGTCCTGGTGGAAGGCGAACTC 3963786 32 96.9 36 .......................T........ GGGGTGGGGGCGCAGCAGGCCTGGGCCCGGCTGCCC 3963854 32 100.0 35 ................................ TCGTAGGTGTGCAGCACCCGCACCAGGGCCCGAAG 3963921 32 96.9 37 .............T.................. CTGATCGAAGAGCGACTGGCCCGTCGGTTGGAGGGGC G [3963940] 3963991 32 100.0 0 ................................ | ========== ====== ====== ====== ================================ ======================================== ================== 59 32 99.9 34 GTCGCTCCCCGCGCGGGGGCGTGGATCGAAAC # Left flank : GGAAGTAGGGGCATGCCATGCTGATGCTGGTCACCTATGACGTCAGCACCGTCACGCCGGAAGGCCGGCGGCGGCTAAGGCGCGTGGCGCGCGCCTGTCTCGATCGTGGCCAACGGGTGCAGAATTCCGTGTTCGAATGTGACGTCGACCCAGCACAATGGGCGACACTGCGCGCACGGCTGATCGCCGAGGCGGACCTGGAGCAGGATAGCCTCCGGTTCTACAAGCTGGGTGCATCAGGTAAAGCACGGGTGGAGCATCTGGGCGCCAAGCCCATCCTGGACCTGGACGGGCCGTTGATCTTTTAGGGCCTTCGGCGTGGCGCGAACCACAAGCGGTCACGAAAGTGCTGTGAGGATCGCGCGCGGCCGAGGCTGCTGAATACGCCAAGGAAAACCGGCTGGCTGGGATTGCGTGTTGCGTCCAGGAGCCAGCCTTGAAGCAGGTTCGCATCCGCTTTTCTCCATCCGTTTGATATGTCAGTGCTTTTTGTGCAAGGC # Right flank : CTTCGGCGCGTAGACCATCCCGTCGAGCGCCTTGGTCACCCCCCGCGCGTGCCGGGCATCGAGGCAAACCACCGGGATCCCGAGTGCCTTGAGCGAGTGGTACAGCCAGGGCGTCAGCCGCCCTGTCTCCGGTCCCACCCGCCGCCACTCAGGGGCATGCCGGCGGAGCACCATGGCCAGCACTTCCGGCTCGCTCGCCCGCGCGCCCTTTCACACCAGCCTGCCGGGCCAGGCTCCACCCACCCATCGGGGGCGTCGGGCACGAATCCCCATCCGGGGAAGCGCCAGCAACCCAAGGCCGTCCACACCTTTTATTGGTCTGACCGGTTGACAGGCCAATCCAGTGGCGCTCATCTCCGCCCGGGAGGCCCTCATGTCTCAGCAGGCGGTGAGCCGGCTCAAGCTGATCCGGCCCAAGCGAATCTACGAACAGATTGCCGAACAAGTGGAAGCGCTCATCCGCAAGGGCGTCTTCGCGCCCGGTGCGCGTCTTCCCGGCG # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCTCCCCGCGCGGGGGCGTGGATCGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [4,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-11.30,-7.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-12] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [51.7-26.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //