Array 1 80170-76958 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAJEMZ010000016.1 Acinetobacter baumannii strain MRSN1990 MRSN1990_contig00016, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== =============================== ================== 80169 30 96.7 30 .............................C ATCAAAGGCTTTGAGGGTAAGCGCCTTTGG 80109 30 96.7 30 .............................G TTGCGCTGTTTTTGAACGTGTAATTGGATA 80049 30 93.3 30 ............................CC AAAGCGGTTAAGCCTCCAAGATTTGCATAC 79989 30 96.7 30 ............................A. GGTAATACAATTCAATCTCACTACAAGAAT 79929 30 96.7 30 ............................A. ATATTTTACGTGTTGATTCAACTACGGGTG 79869 30 100.0 30 .............................. TGGGGTAACTGGTGCCTTTAAGTTGTTTTG 79809 30 100.0 30 .............................. CCAAAGTCTTGTTCAATATCTTGTTGTTGA 79749 30 100.0 30 .............................. GCTCATCAATACAGCTACAAGAAAATTTGT 79689 30 93.3 30 ............................AG CATAAGCATAAAAATTATGTGTGAATATCA 79629 30 93.3 30 ............................AA TATGCAACAATAGGAAATTGCTCAGCATCT 79569 30 93.3 30 ............................AG TTACATCATTGCTTTTAGTCTTTTCTATCT 79509 30 96.7 30 ............................A. GGGCCGCAACCATACGGTCTATGACTTCCA 79449 30 96.7 30 .............................C ATGATCATAGCCCTTATAGATATCGTATTT 79389 30 96.7 30 ............................C. GCGAAAGCGGGGTTTTTTATTGCCTGAAAT 79329 30 93.3 30 ............................GC ATAGGCATTTACTCCCGCTGTGAGTGAAGG 79269 30 96.7 30 ............................A. CTGCAAGACCACTGATAGTTGTTGAGAATC 79209 30 96.7 30 .............................G TGGCGTAGCGTTTCCAAAGTTGCCCATTGG 79149 30 93.3 30 ............................CC AAGCGTGACCAACTCACCAGTTGTCACAGG 79089 30 100.0 30 .............................. TTGAAACTTATAGGCTTGGCTTGGGTTATC 79029 30 96.7 30 .............................G AAAGGGATTTAAAAGCAGTTACATAAAATT 78969 30 96.7 30 .............................G AATTGGATTTCGTAAATCATTGAGCAAGTT 78909 30 93.3 30 ............................AG CATCAAGTAGATCAGCAGTTACCTGTTCAG 78849 30 100.0 30 .............................. CTGTATTAGTGGCCTTCATGTGCATTAAAA 78789 30 96.7 30 ............................A. ACATGCCCACGTTGAAAATCGGGTACCAGT 78729 30 96.7 30 ............................G. ATTAAAACTGCTTATAAACTTTCTTAAATC 78669 30 100.0 30 .............................. GAAAAAAAGCATCATATTGTTCGGGGCAGG 78609 30 96.7 30 ............................A. TTTTTCTGTTAACTCTAAAATACCCTTCCG 78549 30 96.7 30 .............................A AAAGTAGAGAGTGGCGGTGATTCACTAAGA 78489 30 96.7 30 ............................G. TGTCTGATCCGACAATTTGGCTGAGTACGT 78429 30 100.0 30 .............................. GTACAACAATATGACCCGTATCGATGTAAC 78369 30 93.3 30 ............................AA CAATTGCCTGAGTGGTATGAGCCACCAGTA 78309 30 100.0 30 .............................. TGATAGCTAAAGTAGAAATCAAAGTCGCAA 78249 30 100.0 30 .............................. TTATTGCTGGGAATGAAACATCAAAGCAAA 78189 30 96.7 30 .................T............ CTCATCGTGAAGGTTTTGCAAATATGCCTT 78129 30 96.7 30 .............................G TCCGAAATTCAGATGGTGAAGTGACATATG 78069 30 100.0 30 .............................. CAACCTACGCAAGTATTATGGGAACTATTT 78009 30 96.7 31 ............................G. CTTTATCAGTTACGATGGCATGAGTTTTTGT 77948 30 96.7 30 ............................A. AGCACGAGCAAGTTCTTGAGATGCCAAAAA 77888 30 96.7 30 ............................A. ATCTCGCAGATTTGGACAAGGTCACGAATA 77828 30 100.0 30 .............................. GGACAAAGATTATGACTGAGAAAGACGAGA 77768 30 100.0 30 .............................. GGATGTGCAATTTGGTCAAGATGTGGGGAG 77708 30 93.3 30 ............................CG AACACGACTTGAACCAAAGTTAGAAAAATA 77648 30 93.3 30 ............................CA ACTAAAAGCTATTTATGGGGGTAAAAATTT 77588 30 96.7 30 .............................G TCATTGGCCGGCCATTCACAACCCCGATAA 77528 30 93.3 31 ............................CC AAAAAATGAGGAAATTGGACAATATCCAACA 77467 30 96.7 30 .............................G TTGAACGAGTTATTCATAAGTGCCCGAAAT 77407 30 93.3 30 ............................AG CGGAAATCTTTTCAAGTGCGTAGGGGATAA 77347 30 100.0 30 .............................. CTCCAAGTAAAGAATAAAACAATATACCGC 77287 30 96.7 30 .............................C AAGGCGATCCACCTCCCGTCACAGTCATTT 77227 30 93.3 30 ...........T.C................ TGCTAAAAGGATTTATGCTTTAAAATACTT 77167 30 86.7 30 .......A.....C...T..........G. TGGCGTACGGATAACGGAAGAAAGCATAAG 77107 30 86.7 30 .......A.........T..........AA ATAACCACGGTTGTGGTAAGTCACTTTTAC 77047 30 80.0 30 .......A.A.....T.T..........GC GTTCAGGTTGAGGAGATGAAGTGATGTGAT 76987 30 70.0 0 ...T...A...T.....T..C...AGCG.. | ========== ====== ====== ====== ============================== =============================== ================== 54 30 95.5 30 GTTCATGGCGGCATACGCCATTTAGAAATT # Left flank : GGCAAATGGCTAGAACGATTCATTGATTATGTACATATCACTCAACCGAGAGAAGTGCCTCGAGCCAAGATTACAGGTTATGCGCATTACTATCGAGTTAATCATAGAATGAGTGTTGAGGAACGTATAGTTCATCAAGCACAACGTCGTAATATTTCTTTGGATCAGGCTAGACAGCATTTTAAACAATATGTTGAGCAACCAGTGGTTGAACCATACGTAAGTTTAAAAAGTCTCAGTGCAAAACGTGAGGAAAATGTAGATCGCCCCTATCGTTTATATATTGGTAAATCACTTGTTGATGAGGCAAGGGATGGGATGTTTGGAACTTATGGACTAAGCCGAATGACAACAGTCCCAGAGTTTTGACCCAATATTTTTTCTATTCTTTAACAGCTCAATAAAATCAATAAGTTACAATAGGTCTTTTTTGATTGGGTAAAATGCCAAAATCCATGATAAACACTTGTTGTAACTTATATTTTTACTATAATTTTATA # Right flank : AAGATAAAAAAACAAATGATCACTGCTTAGTATTCTTTATCTTTAAATTTTAAAGAAGAAAATATATTCTGAGCTCAAGATATTTAGTGGTGAAATTTTTATGCGCGGTTTATACCTCATTACCAATGATGACCCAATCCAATTATTATTAGAAAAATTAGACGCCGCACTCGCAACCCGTCAAATCGCAATTTTACAGTACCGCCGTAAAAAAGTAGACAAAGCCGACCAACCTGCTGAAGTTGAACAGATCAAACAATTATGTGAAAAATATCAGGTTCCTTTTGTCATTAATGATGACCTAAAACTGGCTGCTCAGTTTGGTTTAGGTGTGCATTTAGGTCAAAGCGATGGCGAAATCACCGATGCAAAATCGCAGTTACCAGAAGGTGTTATTATTGGCCGTACTTGCTTAAACTCATTAGAACTTGCCCAAAAAGCTATTGCCGATGGTGCAACTTATGTTGCCTTTGGTGCGGTTTATGCAACTGCCACTAAAC # Questionable array : NO Score: 5.34 # Score Detail : 1:0, 2:3, 3:0, 4:0.78, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.30, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCATGGCGGCATACGCCATTTAGAAATT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: R [matched GTTCATGGCGGCATACGCCATTTAGAAATT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-6.60,-8.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [20-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [80.0-80.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.28 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //