Array 1 351-518 **** Predicted by CRISPRDetect 2.4 *** >NZ_KB908238.1 Pannonibacter phragmitetus DSM 14782 H163DRAFT_scaffold00024.24, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 351 36 86.1 30 AGAC.................C.............. GCCGGTGCAATGACCGTGCGGCCGATAAGA 417 36 100.0 30 .................................... GGCCTCAGCGCGGCGCAGGCTAACCTCGGA 483 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 3 36 95.4 30 GCCGTGGCTTCCCTACCGATTTCCCTGTGGTAGGCT # Left flank : TCGGAAGCGTCGGTGATAGTTACGACAACGCCTTGGCCGAGACGATCAATGGCCTCTACAAGGCCGAGGTCATCTGGCGCCAGCGGTCATGGCCGAGCGCGTCGGCCGTCGAAATGGCGACCCTGCGCTGGGTCGATTGGTTCAACAACAACCGCCTGTTCGGCCCCATCGGGCACATCCCGCCCGCAGAGGCCGAAGCCAAATACCATGCAGCCCAAAAGACCCTCGATATGGTTGCATGACTCAAATGAAACTGCCTCCGGAAAACCCGGGACGGTTCAGGGTGCTGGGAAGTCACGTCTTGTCATCAAACCGGACAAGCTGCCTTTAAGGGATGCCCAAGGTTGCCAA # Right flank : TNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN # Questionable array : NO Score: 5.13 # Score Detail : 1:0, 2:3, 3:0, 4:0.77, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCCGTGGCTTCCCTACCGATTTCCCTGTGGTAGGCT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [3,11] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GCCGTGGCTTCCCTGCCGATTTCCCTGTGGTAGGCT with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-2.30,-2.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [1-1] Score: 0/0.41 # AT richness analysis in flanks prediction: F [48.3-0.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.14,0.37 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], // Array 1 30583-32689 **** Predicted by CRISPRDetect 2.4 *** >NZ_KB908235.1 Pannonibacter phragmitetus DSM 14782 H163DRAFT_scaffold00021.21, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 30583 29 100.0 32 ............................. GAACAGCGGAAGCCCAAGAAGGCGGCGCCGCT 30644 29 100.0 32 ............................. TGGTGGCGGCGCTGGAGCGTTTTGCCGGGTTG 30705 29 100.0 33 ............................. CTGGTGCTCTGGCATCTGGCCGACCGGCACCAC 30767 29 100.0 32 ............................. CGGATCAGCGGTCTTGCCGGGCAGATGGAGGA 30828 29 100.0 32 ............................. GACATACTGTCCTCAATTCATCCCCGCTCAAT 30889 29 100.0 32 ............................. CCTGGGGCATGGTGGTTGGCAATGAAGATGAT 30950 29 100.0 32 ............................. CCTGTGATCATTGCAAGATGAAGATCAGCGGT 31011 29 100.0 32 ............................. CCGTTTGCAGGTTTGTGGTGGCCTGATCAACG 31072 29 100.0 32 ............................. CGTATTCGGCCTTGATCTTGTGCGAGCTTAGT 31133 29 100.0 32 ............................. CGCTTTCCAGAGACAGGCCTAGCTCATCGACG 31194 29 100.0 32 ............................. GTTGGGGACAGATTGCTGATGGTAGAGCGATT 31255 29 100.0 32 ............................. CGCCACCAGTCACCACGAACCCAAGACTACCC 31316 29 100.0 32 ............................. GTCTTGCGCAGGTAACTGCGGTTGAGGCCTGC 31377 29 100.0 32 ............................. ACGTTGCCCCCACAATTAGCAGCCGCACTACA 31438 29 100.0 32 ............................. CGCGGCGTTCGGTGGCGGCAATACGAGCGGTG 31499 29 100.0 32 ............................. GCTGGCGCGCAGGTTGGCTTGACCCTGCGGGC 31560 29 100.0 32 ............................. CGGACAAATGACCGCGCTTTGTCCGCTTGTGT 31621 29 100.0 32 ............................. ACCAGCATTGCGGCAGGGATCCTCGTTACCGC 31682 29 100.0 33 ............................. GCCAGCATGGCGCAGCGGCGGACGGCGGAGCTC 31744 29 100.0 32 ............................. CGCTGCGCATTGCTGGCGCGATCCGCTCCGTG 31805 29 96.6 32 ............................A TGAACGTGGCCTTGGAGCCGGTGATAACATCG 31866 29 100.0 32 ............................. GTGGCGGATCTGCGCGGCACGTGCCGGGACAC 31927 29 100.0 32 ............................. GCGAACAACGTAGGCCAACATCGCCCTACAGA 31988 29 100.0 32 ............................. CGCCAGCTTTCCTTGCGTTGCGTTGAAGCTCT 32049 29 100.0 32 ............................. GTTATCTGGACCCGGCTCCGGCTGATCCTGCG 32110 29 100.0 33 ............................. TCCGTCAGGCTGGCCAGATCCTTGATCCACGGC 32172 29 100.0 32 ............................. TCGTCTCGGTCCTGCTGACCAATCCTGGGGTC 32233 29 100.0 32 ............................. CGCGGGTAGAGCGGGAAATGGATGCGGCGGCA 32294 29 100.0 32 ............................. GTCACTTGGCGCCTCTACGACAACGTCGTGAT 32355 29 100.0 33 ............................. CGGCTTTGCCACTTCCTGGGGCAGATCGCCTGT 32417 29 100.0 32 ............................. ACCGCCGGAGAGGCGGTCCCGCAGATTGACTA 32478 29 100.0 32 ............................. GGATCCGGAGTGCCGACGTTCTGCGTCTTGCC 32539 29 100.0 32 ............................. GAAGACTGACCGGGAAGGCGGGCTGGGTGGCC 32600 29 96.6 32 .......T..................... AACGCCTCAGGGTACAGCGTGCGCTTGCCGAA 32661 29 89.7 0 .................A......GG... | ========== ====== ====== ====== ============================= ================================= ================== 35 29 99.5 32 GTGTTCCCCGCACACGCGGGGATGAACCG # Left flank : ACCCTGCGCATCGCCCGGATGCGGGATGGAAAGCTGGTGCCGCTGGCCGAACCCGGCGGCCCCGGCCCCGATGCCATGGCAGAGGCCTGGGCCCTGTCTGCCCTCAGTTGCCGCAAGGCAATTCTTACCCGGCAGGGCAGGGATGCAAGCCCGGCACCGGACGCGGCAGAAGAAAGGTGCCGCACCGCTGCCCGCGAAACCCTGCGCCGCAGTTGGCCGGAGTTCGAGGCCTCCATCGTCATCGCCATTCTGGAGGAAGACGGCCATCTGGATGCGGGCCCGGACTTCAGCCGCTCGCTGTCCTACAGCCGCAGCAAGGGCCTGATGAACGGCGCGGCGCGAGAGTGATGCCGCTCTGCCAGAGCTGCAATCTGGCCGGGTTTCTCTTGCCTGTTACAGCCCTTTGCGCCACTCTCCAACCCGCCCCCGAAAGCCCCTGATTTTCCGGTAGCTTTCCGCTCTTTGAAATTCTACTGTCAGATCAATGCTCTCCAGCAAGA # Right flank : GGACTTACGGCATCCTTGCTCTTGTTTGATGGACTGGAGGCAAAGGTATCGCAGAGGTCTCCTAGACAAATTGCACTCTATGGAGTACATGTTTATGGTCAATGTGATCAAGACGGATGCCTTTCACCGCTGGATGAAATCCTTGGCAGATCAGCGGGCGAGGGCACGGATTGCCATGCGCATAGACCGGCTTGCCGAAGGGAATGCGGGGGATTTTGCGCCGGTAGGCGAGGGCGTTTGCGAATTGCGGATAGATTATGGACCCGGCTACAGGGTCTACTATTTGCGGCGTGGTGACGCCTTGGTGCTGCTTCTGTGTGGCGGTGACAAGAGCACGCAACCGGCAGACATCAGGAAGGCTTTGCAGATCGCACATGAATGGAAGGACGGATGATGACAGTCCAACTCAGCCCTTTTGACAGTGCCGAATATCTCGACAGTGAAGAAGCCGTCGAGGAATATATGCTTGCGGCCTTCGAAACGGAGGATCCTGCCTTTAT # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCACACGCGGGGATGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCACACGCGGGGATGAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [56.7-48.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.65,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 41537-43517 **** Predicted by CRISPRDetect 2.4 *** >NZ_KB908235.1 Pannonibacter phragmitetus DSM 14782 H163DRAFT_scaffold00021.21, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 41537 29 100.0 32 ............................. GCTGGCGCGAAGGCGCTGGCGGATGCCGGTCT 41598 29 100.0 32 ............................. CCAGCGGCAAAGACGCGGACGCGCAGAGCCAG 41659 29 100.0 32 ............................. GTCACAGCCTTCCACAGGCAGGACCCACGCGG 41720 29 100.0 32 ............................. GATCAGGCCACGGCGGCGCGCGGCATGCGGAT 41781 29 100.0 32 ............................. GCTGGCGCGCAGGTTGGCTTGACCCTGCGGGC 41842 29 100.0 32 ............................. ACGTTGCCCCCACAATTAGCAGCCGTCCTTCA 41903 29 100.0 32 ............................. TTCAGCGGCGGCGGGGGTGAGATGACTGCGTT 41964 29 100.0 32 ............................. AAACTGCACAATGCTGCTGGCGCCGGTTCCGG 42025 29 96.6 32 ............................C GTTGATGTCAGGTGCTGCACTTGAGCAGTTTG 42086 29 100.0 32 ............................. GGGCGGCCCAACAAAGGAATGAAGCCGGGCGG 42147 29 100.0 32 ............................. CGGCGGCAGCGGCGCGGAGGTTGAGTTCGGCG 42208 29 100.0 32 ............................. GCGCCCGGCCACTTTTCCCTTTCAGTTTTTCC 42269 29 100.0 32 ............................. CCGGGCGGTTTCCGGCGCTTGTTGCAAATGCA 42330 29 100.0 32 ............................. AATGGTCTTTTCGTCGATGCCGGTGCGAGCCG 42391 29 100.0 32 ............................. TTTAGACCCCCTCTCCCTGCCCTAGAATGGGC 42452 29 100.0 32 ............................. GGCTGTTTTTCGCGGCCCGTCCGGCATGGCCT 42513 29 100.0 32 ............................. CAGGACGATGGCCCGCTCAACCCCGACCAGAC 42574 29 100.0 32 ............................. GCACGCTGGACAGTATGCGTAATGCGCAGCAG 42635 29 100.0 32 ............................. TCATCTGCTGCTGATTTGCGCCAGCCTTCTTC 42696 29 100.0 32 ............................. TAGGCGAACACCTCTTTGTGCCAGTTATCGAC 42757 29 100.0 32 ............................. CTGGACGAGATTGTCACGGAAACCCAGCTGCA 42818 29 100.0 32 ............................. TTCACCCATTACCGCTGGTTCAACAAGGATGC 42879 29 100.0 32 ............................. GTCCATGTCACCAGTAGGTCGCCGCTGACCTC 42940 29 100.0 32 ............................. GCTAAACAACATGAGCGGGCACGCAGACAGAC 43001 29 100.0 32 ............................. GCCGATCAATGCGAGCTGGTGAACATTGGTGA 43062 29 100.0 32 ............................. GCATCGAAAACACGGTGGCTCTGGCCAGCATG 43123 29 100.0 32 ............................. CCACGGGCCTGCTTCAGGTCGTTCCAATCGGT 43184 29 100.0 32 ............................. TTCAGCGTGGGTCCTGCAGGTCACCTCGTCGA 43245 29 100.0 32 ............................. TTCCCTCAGCCGAACTACGTCACGCTCAAGAT 43306 29 100.0 32 ............................. CGTTCGTTGCAGACTGTACTCGGACGACCTGT 43367 29 100.0 32 ............................. ATTTCGTTCTCTCTGAAGCATCGCAGCGATGC 43428 29 100.0 32 ............................. CGTGTTGAGGTTTCTGGCGTGACGATGGAACG 43489 29 93.1 0 ..........................G.T | ========== ====== ====== ====== ============================= ================================ ================== 33 29 99.7 32 GTGTTCCCCGCACACGCGGGGATGAACCG # Left flank : CGGACTACGCCGTCGATCCGGCTTTCGAGGATCCCTCTCCCTCCGGCGATGCGGGGCACAGGTCATGATGATGGTTGTCACCACCAATGCTCCGCCCCGGCTGCGCGGGCGTCTCGCCGTCTGGCTGCTGGAGGTGCGGGCAGGCGTCTACATCGGCACATACTCGGCCCGCACGCGCGAGATGATCGCCAGTCAGGTGGCGGCGATGATCGAGGATGGGGATGCCGTGATCGCCTGGACGGCCCCCACCGACGCGGGCTTCGACTTCCAGACCTATGGCCGCAACCGGCGCATGCCCGTCGATTTCGACGGCCTGCGCCTCGTCGCCTTCCATCCGCCGGATGCCGGAAATCCGGGGCCGGGTGGGCTCGGATCAGGCTGAAACAGGCCGGCCGGACCCGTTATTTTGCCCGTCTCCGGAAGCCCGCAAAACCGCCCAAAAAACCGGTAGCTTCCCGCTCTTTGAAATTCTACAATGAGATCAATGCTCTCCAGCAAGA # Right flank : TCTCGCGGGAGAGCGTGTCCGGTGAGTTGAACAGACTGTTGTTTGAGCTTGAGCAACCACAAGAACCGCATGGTTTGGTTGTCGCTTGACAACCGGGTCATGATGTCCATTTATGGGAGGAGAGATATTGCGCAGAGTGCCTCCGGACAGGGAAATCGAAGCGGCGTTAAGGCATGCTGAAGAGAAGGGCTGGCGGATCAGGCTGGGTGGCAGCCATGCATGGGGCAAGATGTATTGCCCTTACAATGATGATAGCTGCCGCTGTGGCGAGTTTTGTATGACGAGCATATGGAGCACGCCAAAAAATGCCGGATCACATGCAAAGGCACTGCGGCGCGTGGTGGATAAATGCTCCATGAAGACTGGAGGGTAAACGGCTCAAGGCAGAGGGGAGTGACCATGATGAAGGAATACAGCTTTACATTGAAATACCGCCTGCCTGCAGAGGATGCCGGTCATGACGCTATCGTGGAACGGCTTGGAGAGGCCGGCTGCACGGA # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCACACGCGGGGATGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCACACGCGGGGATGAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [56.7-45.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //