Array 1 56499-59710 **** Predicted by CRISPRDetect 2.4 *** >NZ_LBAK01000015.1 Legionella pneumophila strain WX2011046 Scaffold13_1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================== ================== 56499 28 100.0 33 ............................ CTGTTAATGTATTGACAACATCCCCAGTGTATT 56560 28 100.0 32 ............................ TATTTGCCACCATCTCACTAAAAACAGTGCCA 56620 28 100.0 32 ............................ ATTGCGCCTCGGCTAAATCTTTATTGCCTCTC 56680 28 100.0 32 ............................ TAAAACTTAGTAGTGGCTATGAACAGAAACTA 56740 28 100.0 32 ............................ CAATAATACCTTGGTTCGCCGTACTCGTTCAA 56800 28 100.0 32 ............................ GACGGCGAGCATTTCATACCGATACCCAATTA 56860 28 100.0 32 ............................ AAAATTGCGTTGCGACAATCAACAAAATTATT 56920 28 100.0 32 ............................ TAAAACCCGCTATTGAACTTATTAATCAGACA 56980 28 100.0 32 ............................ TTTATCATATAACTCTTTAGTAACCCGTGTGG 57040 28 100.0 32 ............................ TGGTGTTAACTTTCTATTTAATGAAGCAACAA 57100 28 100.0 32 ............................ AGTTCTTGATGCTAATAACCAACCAGTTTATG 57160 28 100.0 32 ............................ AATAGTGTTGATCAAGCTCATCATAGCTAAGG 57220 28 100.0 32 ............................ CTGTACATCAACATCCAAATAAACAATATAGT 57280 28 100.0 32 ............................ TGAACATCAACATCACAATAAACAATATAATT 57340 28 100.0 32 ............................ ATATACAGGCTCTCCTGTAACTGAGCCGCCAG 57400 28 100.0 32 ............................ AGTAGACTGGGTAGAGCGTGGCACAAAAGTGT 57460 28 100.0 32 ............................ AAGATTATCGTAGCCTGTAGGCTTTGTATTTG 57520 28 100.0 32 ............................ TGGCCAAGTGCAGGACACGCCATATTTTTATA 57580 28 100.0 32 ............................ TATCTCGCAAATCTAAGTTTTCTGACATAATT 57640 28 100.0 32 ............................ GATATTGCATTTCTCGAAAAGTTTTATGCTGA 57700 28 100.0 33 ............................ ATTTAACGAAAATTTGTAGGTATGGTGGTGCTT 57761 28 100.0 32 ............................ TTATGCGAATAATCCAGAAAAACTTGCTAATA 57821 28 100.0 32 ............................ AATAGAGCCAAAATATGCTCTATAATTTTTAT 57881 28 100.0 32 ............................ TTGCGTCCTCAATAAAAACTGTAATAACTTCT 57941 28 100.0 34 ............................ AAGAAGCCCTCATTGCGAGGGCTTTTTAGTTTTA 58003 28 100.0 32 ............................ TGAATGACCTCGTTCATTTCCGTCTAGTATCT 58063 28 100.0 32 ............................ TTGTTGTCGTGTTGCTATATTTTGCGCTGGTG 58123 28 100.0 32 ............................ ATAGTTTCCAAAATATCGCTGGGCAATAGATA 58183 28 100.0 32 ............................ TTAAAGGTGCACCAAAGATTTATTCTCAATAC 58243 28 100.0 32 ............................ AATTGTTAATGTCGCTGAGTGGGGCGGTGATG 58303 28 100.0 32 ............................ TAGGTGGCGTAATAGCCTACGGTGAAATAAAA 58363 28 100.0 32 ............................ AATTAAGGGCTATTTATCAAGTGTCTTTACAG 58423 28 100.0 32 ............................ ACATGAAGACAAGAAAACGGGCAAAAAGACCT 58483 28 96.4 32 A........................... AGTTAGATATAGAGGGAGCAATGAATTTGAAA 58543 28 100.0 32 ............................ ACAGAAGCATTTAATAAAAAACAAGCCGGAGC 58603 28 100.0 32 ............................ TGTTTCTTGTCAATTCAACACAGAGAATAGAA 58663 28 100.0 32 ............................ GTTACAGGAGTATTAATAGACAATAGTGACAA 58723 28 100.0 32 ............................ AACAAAGAGAAGACGGCTATTTTATAGGCGAG 58783 28 100.0 32 ............................ AGTATGTCACTGGGCAATAAATACTCGATTTT 58843 28 100.0 32 ............................ CTATATATGACGGGTCTTCGCTAGGAAAAGCT 58903 28 100.0 32 ............................ TTAGTGTCGCTAAAAGCTCCCGCCAAGATTAT 58963 28 100.0 31 ............................ TGTCCAAGTCATGTTTTAATTGCATTTGATC 59022 28 100.0 32 ............................ TGCTATTCCCACCCAAGGAACAACCTTCACTA 59082 28 100.0 32 ............................ TAGTTAACGTGTCTATTAGTTTCTTTTCTGTA 59142 28 100.0 32 ............................ TTATAGGATACACATCGTCATTCAGAATGGGT 59202 28 100.0 32 ............................ ATATCCAGCAGCTAAAATGCATGGCGCAAAGG 59262 28 100.0 33 ............................ CTAAATCAATTATTCTTTTCATTGCTTCAAAAT 59323 28 100.0 32 ............................ TTGGACGTAAAGATTCGAAATGCTTTTATTTA 59383 28 100.0 32 ............................ AGCAGCCTTCATATCAGCCACCATACGCTGAT 59443 28 100.0 32 ............................ TACATGCAGATAGGCGAAGGGGGGTATGCCCC 59503 28 100.0 32 ............................ TGTCGTGAAGACTAGCAAAAGAGCTATATATA 59563 28 100.0 32 ............................ TCTTGGCACTACTGCTCCAGTTATTCGTGATG 59623 28 100.0 32 ............................ AACGAGTTTGACGACTAAACATCCTATTCAAA 59683 28 96.4 0 ...........................G | ========== ====== ====== ====== ============================ ================================== ================== 54 28 99.9 32 GTTCACTGCCGTACAGGCAGCTTAGAAA # Left flank : CGGTGTCTCGTAAACAGCCTACAATGAGCCAATCAAAATTGAGGCGGTTAATTAAACGTAACTCCTTGACAGAAGATGAAATCAGGCAATACAAGGCAAAGATGTTTTCCAAAGGTCTGGATAATCCATATATTGAACTTGTGAGCGTATCAAACGGGCAAAGGCACCGACGCTATATTGAGTTTGGCGAATTGTTCAATGAGCCAATTCCTGGCCTCTTTGATCAGTTCGGCCTTTCTAACAGTGCTACTGTTCCATGGTTTGATTAAATTTTAGAACAAGGTAAATTCCTTGAGTTCGATAGGTTAAAGTAAGGAGATATAGTTTGGTCAAATGCTTCAATACTTGATTATTTCGATACTTCTAACGACCAATAAATTTAGTTCTTTAAAAATTTGTCTTAAAATCAATTGGTTATAAATTAGCTGAAAGATATTGGGTAAATCGATTTTTTTCAGCTAACTTTCTGTTATAACTATTTTTTTAAGATTTATATCACA # Right flank : GTTATTATGTTAAAGGTGTTAGCACGCTACGCAGCAAGGTCGGACCAAGGCCTGACCTTGTTTTGATTAGGAAAGTCTAATCATGACTATAATCTCCATTTCTCTTTATGGAGTACAGCAACCGTTAGTCAAATCTATAAATAACCTAAACAAATAAAAATAAACTCTCTAATTCCATGGAAATGAGTGTAATTGGATCGAAGTCAAAATAAATTGTGAAGTCTGATTACTGAGAAAATTAAATGTAGTTGATGAGTATCTATTGAATCATGAGAATAATCTAATGGTGTATGTTAATTATACACGTATGCTAAAAATTACTACCTGATGAGCTAGGATATTCTCTACCGCGTTGTTTGAATCACACTGAGTCAATCGTAAATTTATTTAGCATTACTGAGAATTATTTAATCCTCAAAAACTCAATAATAAATTTAGATATTTCACAAAATCATACGGTGAATGCTCTCCTGGTTTCGTCAGTTACTGAAATAGTGGTT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCACTGCCGTACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [80.0-51.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //