Array 1 71908-72141 **** Predicted by CRISPRDetect 2.4 *** >NZ_KV800033.1 Lactobacillus sp. HMSC078F07 Scaffold69, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 71908 36 100.0 30 .................................... TTGAATAGTGTTATTCAGGGTATGCAAGAC 71974 36 100.0 30 .................................... AACTGTTGATACTCTTGAATATAAAGGGGT 72040 36 100.0 30 .................................... AACATCTTTTTTGTGTGCGGAAACATAGTC 72106 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 4 36 100.0 30 GTCTCAGGTAGATGTCAGATCAATCAGTTCAAGAAC # Left flank : TAATGTTCATTTTGATGAAGAAGTACTCACGGAGCCTTTCTCGAAAGTTGAAGCGGCAATTCAGACTTTGGCGAAACTTGAGGAGAAACGTCTTGTCATTTTTACCAACATCAGTCATTATTTAGATGTTGATAGTTTAAACAAGCTGTTAGATCAGGTTAAGGACACATCGTTAGAATTACTTCTCATTGAATTTTCAGATGTCGAACGTGGAAAGTTTTTTGAGAAATGCCAGTATATCTATATTGACAAAGATTTCATGGATAACCGTGAACTGATTGATTAAGAGACTGTGTGAAAACACCGGTCTCAGGTAGATGTCAGATCAATCAGTTCAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCAGGTAGATGTCAGATCAATCAGTTCAAGAACCTGATTCGCAAAATCCCGGGCGTGGGCTGA # Right flank : CAGAAAGGAGACTGAACATGACTGAACCTGTGTCTCAGGTAGATGTCAGATCAATCAGTTCANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCAGGTAGATGTCAGATCAATCAGTTCAAGAACCATAAAAGTGATTAGTGTCGATTGGCGTGCGTCTCAGGTAGATGTCAGATCAATCAGTTCAAGAACTGTCTCCCACGGAAAAGTGGCACCTAAAAAGTCTCAGGTAGATGTCAGATCAATCAGTTCAAGAACTTTGGCTACAAGCATGACCCAACGGCAGGGGTCTCAGGCAGATGTCAGATCAATCAGTTCAAGAACGTGTCCAACTTAATATCTGACCACTTAATAGTCTCAGGTAGATGTCAGATCAATCAGTTCAAGAACACGATGAAGAAACAGAAGAACTTGACGGCGGTCTCAGGTAGA # Questionable array : NO Score: 5.86 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTCAGGTAGATGTCAGATCAATCAGTTCAAGAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:58.33%AT] # Reference repeat match prediction: F [matched GTCTCAGGTAGATGTCAGATCAATCAGTTCAAGAGC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-2.50,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [50.0-56.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.87,0 Confidence: HIGH] # Array family : II-A/C [Matched known repeat from this family], // Array 2 72365-72862 **** Predicted by CRISPRDetect 2.4 *** >NZ_KV800033.1 Lactobacillus sp. HMSC078F07 Scaffold69, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 72365 36 100.0 30 .................................... TGTCTCCCACGGAAAAGTGGCACCTAAAAA 72431 36 100.0 30 .................................... TTTGGCTACAAGCATGACCCAACGGCAGGG 72497 36 97.2 30 ........C........................... GTGTCCAACTTAATATCTGACCACTTAATA 72563 36 100.0 30 .................................... ACGATGAAGAAACAGAAGAACTTGACGGCG 72629 36 100.0 30 .................................... GTCGTTTAAGTTGTTTCGTCGCTCTGAGTT 72695 36 100.0 30 .................................... GGGTTATGGGGCGTTAAGCCCATTGATTTA 72761 36 100.0 30 .................................... GTCGTTTAAGTTGTTTCGTCGCTCTGAGTT 72827 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 8 36 99.7 30 GTCTCAGGTAGATGTCAGATCAATCAGTTCAAGAAC # Left flank : TCAGTTCAAGAACCTGATTCGCAAAATCCCGGGCGTGGGCTGAGTCTCAGGTAGATGTCAGATCAATCAGTTCAAGAACTTGAATAGTGTTATTCAGGGTATGCAAGACGTCTCAGGTAGATGTCAGATCAATCAGTTCAAGAACAACTGTTGATACTCTTGAATATAAAGGGGTGTCTCAGGTAGATGTCAGATCAATCAGTTCAAGAACAACATCTTTTTTGTGTGCGGAAACATAGTCGTCTCAGGTAGATGTCAGATCAATCAGTTCAAGAACAGAAAGGAGACTGAACATGACTGAACCTGTGTCTCAGGTAGATGTCAGATCAATCAGTTCANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCAGGTAGATGTCAGATCAATCAGTTCAAGAACCATAAAAGTGATTAGTGTCGATTGGCGTGC # Right flank : CACAATTACCCCAGATTGACCCAAAACGTCTGTCTCAGGTAGATGTCAGATCAATCAGTTCAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCAGGTAGATGTCAGATCAATCAGTTCAAGAACTCTTCTGCCATATCCTGACCCCCTTAAAGAGTCTCAGGTAGATGTCAGATCAATCAGTTCAAGAACCGATTATTGCGCCAATCACCACTGGGTTCAGTCTCAGGTAGATGTCAGATCAATCAGTTCAAGAACGCCAATTGAATAGGCCAGACAAAAATTGCCGTCTCAGGTAGATGTCAGATCAATCAGTTCAAGAACGACTTGGCGGATCTCGTTGTGCTTATTGCGGTCTCAGGTAGATGTCAGATCAATCAGTTCAAGAACGTCGTTTAAGTTGTTTCGTCGCTCTGAGTTGTCTCAGGTAG # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTCAGGTAGATGTCAGATCAATCAGTTCAAGAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:58.33%AT] # Reference repeat match prediction: F [matched GTCTCAGGTAGATGTCAGATCAATCAGTTCAAGAGC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-2.50,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [58.3-56.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.87,0.41 Confidence: HIGH] # Array family : II-A/C [Matched known repeat from this family], // Array 3 73021-73650 **** Predicted by CRISPRDetect 2.4 *** >NZ_KV800033.1 Lactobacillus sp. HMSC078F07 Scaffold69, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 73021 36 88.9 30 NNNN................................ TCTTCTGCCATATCCTGACCCCCTTAAAGA 73087 36 100.0 30 .................................... CGATTATTGCGCCAATCACCACTGGGTTCA 73153 36 100.0 30 .................................... GCCAATTGAATAGGCCAGACAAAAATTGCC 73219 36 100.0 30 .................................... GACTTGGCGGATCTCGTTGTGCTTATTGCG 73285 36 100.0 30 .................................... GTCGTTTAAGTTGTTTCGTCGCTCTGAGTT 73351 36 100.0 30 .................................... TGTATTTTGTACCCCCGTGTTACTTGACGG 73417 36 100.0 30 .................................... ATGCTGGTGATGACACCGACAACCAGAAGG 73483 36 100.0 30 .................................... GTCGTTTAAGTTGTTTCGTCGCTCTGAGTT 73549 36 100.0 30 .................................... TGATGGTTTTGCCGTCCGGCTTGACAATCC 73615 36 88.9 0 ................................NNNN | ========== ====== ====== ====== ==================================== ============================== ================== 10 36 97.8 30 GTCTCAGGTAGATGTCAGATCAATCAGTTCAAGAAC # Left flank : CAGTTCAAGAACGTGTCCAACTTAATATCTGACCACTTAATAGTCTCAGGTAGATGTCAGATCAATCAGTTCAAGAACACGATGAAGAAACAGAAGAACTTGACGGCGGTCTCAGGTAGATGTCAGATCAATCAGTTCAAGAACGTCGTTTAAGTTGTTTCGTCGCTCTGAGTTGTCTCAGGTAGATGTCAGATCAATCAGTTCAAGAACGGGTTATGGGGCGTTAAGCCCATTGATTTAGTCTCAGGTAGATGTCAGATCAATCAGTTCAAGAACGTCGTTTAAGTTGTTTCGTCGCTCTGAGTTGTCTCAGGTAGATGTCAGATCAATCAGTTCAAGAACACAATTACCCCAGATTGACCCAAAACGTCTGTCTCAGGTAGATGTCAGATCAATCAGTTCAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN # Right flank : NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCAGGTAGATGTCAGATCAATCAGTTCAAGAACATTTCGGCGATGGCCGTCTATCTAAAGATAGTCTCAGGTAGATGTCAGATCAATCAGTTCAAGAACCTTAGAATAGCTTTATTGATTTGGTTATTTGTCTTAGGTAGATGTCAGATCAAAAACCTTCAGTGAAACCTCACCCCATAAATGCTATGCAAATCCCAAAAGAAGGCAACAGCATTGTCAAAAGCAAAACTAATCCTTTCCCCAGCCTTTTACACTGATCTCAAAGAAATCCGTCACATGTACCAACAGGCGTTCAAATCACTTTACGGCAAATATCAAGATCGGGAAACCAATCCCTACTGTGAATCGTTGGAAAGCTTACAGAAAAAGTTCAAACGGCCTAACAATGCCTTCTTCTTTATAAT # Questionable array : NO Score: 6.15 # Score Detail : 1:0, 2:3, 3:0, 4:0.89, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTCAGGTAGATGTCAGATCAATCAGTTCAAGAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:58.33%AT] # Reference repeat match prediction: F [matched GTCTCAGGTAGATGTCAGATCAATCAGTTCAAGAGC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-2.50,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [4-4] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [0.0-0.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.87,0 Confidence: HIGH] # Array family : II-A/C [Matched known repeat from this family], //