Array 1 559057-560408 **** Predicted by CRISPRDetect 2.4 *** >NZ_CADEXV010000004.1 Burkholderia gladioli strain BCC1710, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 559057 28 100.0 32 ............................ AACTGCTGGGCGGACTGCTGGTCCACGTACTG 559117 28 100.0 33 ............................ CGACGAGTAGGCGGCATTTGTTCCGTTTTGCTG 559178 28 100.0 32 ............................ TTCTGCTTTCGCGTGAGCCCCTCTCCGATGAA 559238 28 100.0 32 ............................ ACAAGGGCAGCGTGTTCCTACAACCGGCCAAT 559298 28 100.0 32 ............................ TGGCTGCGGGAACAGGGGGTAACGATCGAGGC 559358 28 100.0 32 ............................ GTGATCGCCAGCAACGAAGCCGAAGCGCGCGA 559418 28 100.0 32 ............................ GCGCCGCCGCGTTTTCACCAGGCTTTCGAACG 559478 28 100.0 32 ............................ GCGACGGCTATGCAGCCACGCCCGGAACCGGG 559538 28 100.0 32 ............................ TCGAAGATCTGGTCCGTCGACACCGGGACGGC 559598 28 100.0 32 ............................ AAGCTGATGGATCACGCGGTTGGCTTCTTCAT 559658 28 100.0 32 ............................ GTCCTGCTCGTCGTCTGAGCGCTGTTCGATAC 559718 28 100.0 32 ............................ GCCGATCACCGCCGGGGCAGCCACCACGAACG 559778 28 100.0 33 ............................ CTGACCGGTGCGCACCGAATCATGGATGGCCTG 559839 28 100.0 32 ............................ TTCTTGGGGTATCGAAGTCGGCGCTTTCTCAA 559899 28 100.0 32 ............................ GTTGCAACGTCGGCCGGCCGCCACACGATCCC 559959 28 100.0 33 ............................ CTACATGGGGCTGCTCGATCTCGCCATCGCGTC 560020 28 100.0 32 ............................ ATGTTGATCCAGCAGGTGCCGTCGTCGGCCAG 560080 28 100.0 32 ............................ TCCGGCCGGAAGTCGGCCGCCGGCGCCGGCAC 560140 28 100.0 32 ............................ TCCGTGTTGAGAATTACACCAAGATCGTCTGC 560200 28 100.0 32 ............................ ATCAGGTCGTCCACCTGGCGATCGAATTCGTC 560260 28 100.0 32 ............................ TGGCTCGTCGCAGCTATCGAGATCCCAGAGAT 560320 28 100.0 32 ............................ ACCAGCAATCCGCGCTTGATCAACTCGACGAG 560380 28 92.9 0 ...........T.C.............. | T [560404] ========== ====== ====== ====== ============================ ================================= ================== 23 28 99.7 32 GTTCGCTGCCGCGTAGGCAGCTTAGAAA # Left flank : ATGGTTTGCATTCGCTGATGGCGCAGTCCTGGCTGCAGGGGATGCGGGATCACGTGGCGATCGCGACGCTGGCGCCCGTGCCGGACGGCGCGATGCATCTGGTCGTGCGACGACGGCAGTTCAAGACCAACGCGGACCGTCTGCGGCGGCGACGGATGCAGCGCAAAGGGGAAACGGCCGAGCAGGCTGCCGCGCATATTCCCGATTCCGTCGAGCGTCGGCCTGATCTTCCGTATGTGCGTCTACGCAGCGCGAGCACGGGACAGGTGTTTTGCCTCTTTGTCGAGCAGGGGGGCGCGGTGAGCGAGCAGGTGCCTGGGGCGTTCAATGTCTATGGGCTGAGCCAGGGGGCGACGGTGCCCTGGTTTTAACCCTTTTCTTGGGCTGATTTGGTTGGCCTTTGAAATCAATGGGTTAGCGAGAGGGTGGAAATTTGGGTGGTTTGCCCTTTCGCGGGTGTTTGTTGTTTGGAAACAAGGGGTTGGAGAGGGAAGGGGCTA # Right flank : ACTGCGATATGAAAGTCTGGCAGACAGGCAAGCTTTGCCTCCAGCGCGCGTGTTTTAAAATCGCAGCGCCAACGGCATCGTCACCGAAGTCGTTGATATGACGAGGCATCCTCGCAGACTGGCTCGAATACCGAGTCGTCCGCGATTCGCGCATGTTCGCACCCGATCGCGGCACAGGCAGCGACACAAACCAGACAGAAAACAGGACAACAGGCCGATGACATTCAATCGCAAGATGGCGCAGTGGACGGCAGCCGCATTGGCCATCACCTGCCTGCAGGTGACCAACGCGAACGCACAGACCTTGAACATACCGCTCGGCACGCCCGACGGATTCTCCGCATCATCGATCAAGAACGTGGGCCAGGACCGCTATTGCATCAGCGGCCGCGTGTACGACGACGCGGGGCCGAGCAATACGGCGATGGCCGTGCTGGTGGACGCCCGGCATCGTACCGTGTCGTGGAAGACCTCGATCCCGCATCCGCGCGACTACGCCG # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCGCTGCCGCGTAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [6,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCGCTGCCGCGTAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [46.7-50.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //