Array 1 31247-28846 **** Predicted by CRISPRDetect 2.4 *** >NZ_POYS01000111.1 Campylobacter concisus strain AAUH-20HCrec-a 1107080, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================= ================== 31246 30 100.0 37 .............................. GTGTGTAGAGAAATAGCGAAAATAATAAAAAGTGTAA 31179 30 100.0 35 .............................. GAGTGGGTAGAAGTATCAAAAGGATACAACCTTGA 31114 30 100.0 38 .............................. CACACATTAGCTTAATTTATTCTAATAAGAAAGAGAAT 31046 30 100.0 35 .............................. AATTTTGTGGAGCGTAAAAGATATTCATATAAATT 30981 30 100.0 37 .............................. TAAGTTTAAGGGGTGCAGGGGTCGCCCCTGCAAAAGG 30914 30 100.0 35 .............................. TTGCAAACAACGGCGAGCTTTTCAATATTAAGCAA 30849 30 100.0 34 .............................. GGGGGTTTCTTGATTATCTTGGCTTTGCTTTGGG 30785 30 100.0 37 .............................. TTCAAACTCGGATCGCGATATGGGTAACTCGGACAAA 30718 30 100.0 35 .............................. GGACGTCTTAACCGACCAAAGTTTAAACGTCCTAA 30653 30 100.0 35 .............................. ATGTATCATTTGATAACATTTTGTTTGCCCCTCCT 30588 30 100.0 36 .............................. GCTTTGCAGCTTGTAGGGTGTAGGGATTTGTTAGGG 30522 30 100.0 35 .............................. GTGTCTTATATTGCTCTTTTGTAAAATATCCACCA 30457 30 100.0 36 .............................. TAGAGATATATGCATGAGGGGATCGCTGTCGGTTTA 30391 30 100.0 36 .............................. TAGCGATAGAGATATAGCTACTTGTCTTTGCACTGG 30325 30 100.0 35 .............................. TCAAAAATAGGCAAATTAGATGTATTAGAGCAAGA 30260 30 100.0 36 .............................. TGGCTGTGCTTGTGGATTTGTTGGGGTTTGCTTTAG 30194 30 100.0 37 .............................. TCAAATGATAGCTTAAACCTTATTAAAAACGTGTATG 30127 30 100.0 35 .............................. TGGGCGTCTTTAGCCTCTTTTTATTTATCTCATTT 30062 30 100.0 37 .............................. ATGGACTGGTCTTAAATGAGGGCTTTGGGCAGCGACT 29995 30 100.0 36 .............................. TCGGCTGGTGCAAGGGTTACGAGGCATACAACATCG 29929 30 100.0 39 .............................. TCAGCGTAACGATTATTTAGGTATTCCCCCTTGTCCTTG 29860 30 100.0 35 .............................. AATATATGGAGTAAGCTCATAAGTGGAGACTTTGC 29795 30 100.0 37 .............................. AGTGTTACCCCTACACCATACCATTTTCTTTTTTTCT 29728 30 100.0 35 .............................. AATACGTTGCTTCACGCTTGCCAATAAATGATCGC 29663 30 100.0 35 .............................. GTAAGGTAAAGGACAGCCTAAAAGCGGACTTTTGC 29598 30 100.0 35 .............................. AAAAGCCAAAACCAAAGCAAAAAAGACAAGCTTGA 29533 30 100.0 37 .............................. GAGCAGAAGGAGAAGCCTTTGGTATATGGAGAGCTAA 29466 30 100.0 36 .............................. TTTGGGTTTCTATCCGCCTTTTAAATGTGTGATAGT 29400 30 100.0 36 .............................. AAAATTCAGCCACAGTAGGAAAATCTAATCTAAATT 29334 30 100.0 34 .............................. AAAAAGTTATCTTCAAGATCATTTGCCCTGATAA 29270 30 96.7 37 .......A...................... AGAGAGATGAGCCTATCTTGCTCGCTTATCTCATCTT 29203 30 100.0 34 .............................. ATGTGAGTAGCAAACCACTCTCCCGCCTTTCTCA 29139 30 100.0 36 .............................. AATGTTTTCTCTCTCTTTTTTGTGCCTATTTTTATA 29073 30 96.7 36 ......................C....... AAGAAGTGCGTTATTTAGGGCATTTGAATATAAAAA 29007 30 96.7 38 ..............T............... TTTAATTCAAAAATCAAGCATTGACAATATAAAACAAC 28939 30 100.0 34 .............................. CTATGGGTGATATTGACAAGGAGCTTGCACCATA 28875 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ======================================= ================== 37 30 99.7 36 ATTAGAATTTACTCCGTTGGAGTTTGAAAC # Left flank : AGCTAGATCCGCGCATCGGCTTTTTGCACGAGCCAAACTACCGCGCACTAAGCCTACACCTCGATCTTGCGGAGATTTTTAAGCCGATCTTGGGCGATACGCTGATTTTTAATATGCTAAATAAAAAAGAGATCACCGCAAAGGACTTCCAAACGGACGCTGGCAGGATAAAATTTAGCAACGACGCCGTGCAAAAGATCGAGCTAAAGATGATCTCGCGTCTTTGCGAGACGCTCACGGTGGGCGGTAGGGAGCTAACGTGGAGGCAGGTGATCCGCCGCGAAGCAAACAAGCTTAAAAAGTGCATCTGCGAGGACGCGCCTTATGAAGGATTTAAGTGGGAGTGAAATCGCATTTTAATAAAGCGTTTTTTAAGATTTTAAAAAGCTTGAAATTTAGGGCTTGGCGTATTTATACATGGCTAAAATTTAGTCAAATTTAAGGCGAAAAAATATAGACTTCTTGCACTAGAACGCCTATAAAATAGGCTTTTTGGTGCT # Right flank : TTTAAAGTGACATACTTTTTAATCTCATCTTTACAAGATTAGATGGAGTTTTAAATCCTAAAAAAAGATGTTCTTAAGTAAAAAGCTTAAAATTAAACTTTAAATTTAGTTTGATACATTAAATTATTAACATTAGTATGTATATTTTAAAATATTTCTAAAGAAGTTGGACCCAAATATGGGTCCGAATAAGGTAGTTATAGACCTTCAAAAGGATTTGAAACTACGTCTTTGCGATCAATTATATAAGGTATGATGGCTGCGTGACGAGCTCTCTTGATTGCTTTTTCTACCATCTCTTGATATCTTTTTGATGTGCCAGTTAGGCGTCTTGGCATGATTTTAAATCTCTCTGATAAGCAATACTTTAAAAGTGAAGTATCTTTGTAGTCTATAAAATCAATCTTTGCTTCTGTAAATTTGCAATATTTGCGTGAATATTTTCTTTTTTCTGCCATTTCTTTATCCTTTAAAATTAAAACGGTATTTCGTTATCGCCT # Questionable array : NO Score: 3.25 # Score Detail : 1:0, 2:0, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTAGAATTTACTCCGTTGGAGTTTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-3.70,-4.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [75.0-63.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,0.78 Confidence: MEDIUM] # Array family : NA //