Array 1 337816-341100 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAHLDI010000002.1 Clostridium algidicarnis strain CM017 contig00002, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ============================================== ================== 337816 37 86.5 39 ..CG.C.GC............................ ATAAAATCTGATAACGTTGGAGCTTATGTTGTTAAGTAT 337892 35 89.2 31 ..G..C..--........................... ATAAAATCTATCAAAAAACTTATGAATCTGA 337958 37 91.9 46 ....T..GG............................ ATAAAATCTTCAAAATCATATTACAGACTGGCAGAGGGTAGATGTA CCTG [337967] 338045 37 86.5 36 .A...A.TTA........................... ATAAAATCTTCAAAATCATTGCATAATACGTACTCT 338118 37 100.0 35 ..................................... ACTAGGAAGTTAAAGCTACTAGCAGGGAAACTAGG 338190 37 100.0 37 ..................................... TCACGTGAAATATGAATTACACGTCAAAGACATAGGC 338264 37 100.0 37 ..................................... TTATTTCAGTTATCGGTGAAGCCTGAATCACATTTTT 338338 37 100.0 36 ..................................... AAAAGAGGGACAACTTTTATAGCACTTGGAACCCTC 338411 37 100.0 37 ..................................... AATTTGCTAATTTGTCTTAAAGCCTTTGAAGAACTTG 338485 37 100.0 35 ..................................... TCAAAATGATGCGTATCCCAGTCTGTACCATTAAA 338557 37 100.0 39 ..................................... TGATTGTATTCAATGTATCCAAGTCTTATTATTTATTTC 338633 37 100.0 37 ..................................... TTCCCAAACCTAATTCGCTATACTCGTATTGGTCTAT 338707 37 100.0 41 ..................................... CTAAAAAATATTCTAGTCTTTGCCGAAACTTTTTAAATTCA 338785 37 100.0 36 ..................................... TGGTATGGGTAAAAGTGCATATATTAGCATGGTTTT 338858 37 100.0 36 ..................................... TTTAATTTTTTTGCTTAATATGCTATCTTTTGGAGC 338931 37 100.0 37 ..................................... GACATTTACAACCGCCAACTATGAAAGATTAAGGGTT 339005 37 100.0 38 ..................................... AAAATTTACAATAGACAATGATGCAGATGAAGTAGCAT 339080 37 100.0 39 ..................................... TTGAATAAAGCTCATTGGCTATAGTTCTTAAACTTGTAA 339156 37 100.0 35 ..................................... GGGAATTATTCTTTTGATTATTCCCCTTCTGTTTC 339228 37 100.0 38 ..................................... AACAGATTGGCAGATAGTAGATGCAAATAGTATAAAAT 339303 37 100.0 37 ..................................... CTAACTTGCCTGTGTTAGAAAATGTGTAAGCTGCATC 339377 37 100.0 37 ..................................... CATATAGCGTTTCTCTTAAGTCTCTAAAGCTTTCTAC 339451 37 100.0 37 ..................................... CTCCAGGTGTCCTCTGCTACCCTTAAAGGGGCTATAA 339525 37 100.0 37 ..................................... TCCAAGTCTTTTGAGCTAATAATAATATTCGCTCTAA 339599 37 100.0 37 ..................................... ACTATACCTATAATTGATGCACATATATTATTGGATT 339673 37 100.0 39 ..................................... TTAAATAGAGCTTCTAGGGATCTTAGAAGAATAATAAAT 339749 37 100.0 34 ..................................... TCGAGTTGGAAGAGCATATTTTCAACTTTTTTAT 339820 37 100.0 35 ..................................... GTTGAAGACACATTTGAAGCAACACAAGATCCACC 339892 37 100.0 37 ..................................... ATTATATGTTGTACGAAACTGACTAGCATAACTCCAT 339966 37 100.0 36 ..................................... TAGATCCTCGAGTTTTTCCACATCTTTTTTATCTAA 340039 37 100.0 35 ..................................... TGTTATTCCATCTAAGGTTAGATTTATTTCGGATA 340111 37 100.0 37 ..................................... TTAGGTAATGCACATACATCTATGGTGAAATGAAACT 340185 37 97.3 37 ................................A.... CAAAATAGTCGGTTTCATTATTCTTATTTTATTTTTA 340259 37 100.0 35 ..................................... TTAAATGCCAATTCATGATTAATATATAAAGCCCC 340331 37 100.0 38 ..................................... TTAATATATAAAAAATAAGGAGGAAAAAATATGCAAAT 340406 37 100.0 37 ..................................... CTTACTAAATTCCTAGCATCATCTAGATCGGGTAAGT 340480 37 100.0 35 ..................................... TAATTGTGCTCTTACATCTTCATCTTCTAATTCCT 340552 37 100.0 35 ..................................... TTATTTTATATTTTTTTTTGTAATTTCTTATCCAT 340624 37 100.0 36 ..................................... TTTAGCTACAATTCCTTGCAACCAAAATCTATCCTC 340697 37 100.0 35 ..................................... TTTAGATAAGTTCGGCGAAGAGACTAAAGAAGTAC 340769 37 100.0 36 ..................................... ACTGGGTTCTTTACTGGTATTGTGGATGGCGCTAAA 340842 37 100.0 36 ..................................... ATATTCTGATTATCGCAATGAGATTCAAATCCTTTT 340915 37 100.0 38 ..................................... CTGTAACCTCGCAACTTATTACATTTGTCAAGGCACAT 340990 37 100.0 36 ..................................... TTGGGGGATGATGCATGATAATAGATTTTTTTATAA 341063 36 89.2 0 ...........T..............A...-.....A | C,C [341089,341098] ========== ====== ====== ====== ===================================== ============================================== ================== 45 37 98.7 37 ATTTCTAAAGACATTAAGCTCCATTGGAGATTGAAAC # Left flank : TTTAGTAAGGCTTTGATGGAAGAAATTGAATATATACCATTTTTAATTAGATAAAAGGAAGTGAATATGGTATGATATATTTAGTTAGTTATGATATAGTTGATGATAAAAAGAGATATAGACTTCATAAAATGCTAAAGAATTTTGGCTCTAGAAACCAATATAGTGTTTTTGAATGTGACTTAGATGGTAAAAAATATGTTGAACTTGAATACAATATTAGAAAGATAAAGATTGAAAAAGGGGATAGTATTATGGTATATCCTATATGTTCATCTTGTGAATCTAAAATTATAAGAAAAGGTTCATTTGTTCCACTAGATGTTACAAATATGATTTATTAAATCGCAAGCCTGGGTGTATTGAAAAACACGGTACCTTGGCGATACTTGAAAATAGCCACTTTAGCAGGGATTACTGTAGTATTCACAAAATATTTTATTGAAGAAATAGTACCCCTGCGAAAAGAGGCCTGTGAGACCAGTGATTACAAGGCCTAA # Right flank : AGATAATATATTTACACTTAAAAAGGTTATGGTTTATGGAGAATAATCTTTCGGTTCGTTAAGTGGGGTGGTATATTAAAATAAATACGTATGGGAGTATATTAATTTTAATAGACAAAACAAAAGACTTTAGTAAGATTAATTCAATCTACTAAAGTCTTTTTTATTGTATTGGGTAATGGGGAAATTGGTTTTTATTGCTTTAATCTTTTTATTTACATAAGCTATATTTAATAACTAGGTCTAAAGTTGCTATTAAAGCATCAATGTGGGTTCTTTCATAGGCATGTGAAGCAAATACTCCAGGGCCTATAAGGGCTGCTTTAACGTCCCAACCAGCGCCTAATACTGCTGAAGCGTCTGAACCGTAATATGGATATATGTCGATTTTATAGTCTATATTATTTTTTACGCACACATCTATTAAGGTTTTTCTTAAATTATAATCATAAGGGCCTGAAGAGTCTTTTGCACAGATGCAAACAGCATATTCAGTAGAG # Questionable array : NO Score: 6.20 # Score Detail : 1:0, 2:0, 3:3, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTTCTAAAGACATTAAGCTCCATTGGAGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:67.57%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-3.70,-2.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [21-7] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [55.0-73.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.87,0.68 Confidence: HIGH] # Array family : NA // Array 1 33123-26081 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAHLDI010000012.1 Clostridium algidicarnis strain CM017 contig00012, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 33122 30 100.0 37 .............................. TAGGTTTAATCATTTTTATTCCTCCCCTTAAAAACTT 33055 30 100.0 36 .............................. ACGTCTTGTGCTAATCTTTCGCAATGACTTTTAAAT 32989 30 100.0 36 .............................. GATTTTTAGACGATGAAAGAGTATATCTTACTAAAC 32923 30 100.0 36 .............................. AATACTAATTTATTTCTTTCCATTTATAAAAACCAC 32857 30 100.0 36 .............................. TCTAATAATAAAATATCTGCAGTTTGAAACTTACTT 32791 30 100.0 34 .............................. TACCAAACAAACAAACAACTACTTAAAACTTTTA 32727 30 100.0 34 .............................. TTAAAAGATTGTTCATATTCTTCTACTTTTAATA 32663 30 100.0 36 .............................. TACACAATATCAATTTCATTATCTTTAGCAGTAGAT 32597 30 100.0 36 .............................. GATATTACAACTTTTTGTTCTGACATTTATCGTAAA 32531 30 100.0 34 .............................. GTAGCTAAAGTATTACCACTTAAACCAGGACCAA 32467 30 100.0 36 .............................. GTACCTATAAATTTTCCGTTTCCATTTAATTTCATA 32401 30 100.0 36 .............................. GAGATAATGTGGCAGGGAAACTTGCCACAGATCTTA 32335 30 100.0 35 .............................. TTGTCATATTATTTTACCTCCAAGTTTTTATTTTT 32270 30 100.0 35 .............................. CTTTGTTCTTTTAAATAATCTGCTATATCTAAAAT 32205 30 100.0 36 .............................. TACATAGTATCTAACATTCTCAAACCTCCTTTTTAA 32139 30 100.0 36 .............................. TGGCTACAACTTTGCTTATAAGTGGGTACCCCCATT 32073 30 100.0 35 .............................. AAATCATATTCCATTTTTTTATTGGGACTTTCTAG 32008 30 100.0 36 .............................. CTTTCTAAAAAAAGCATTCCACAATTTTGAGTAGTG 31942 30 100.0 35 .............................. GCAACTATAAATTTATCATTCACTTGCATTGTTGC 31877 30 100.0 36 .............................. CATTAATTCTTCTACTTTGCCACTAAAGTTTACTCT 31811 30 100.0 35 .............................. CCCCTACCACCCTTTCTTTTAAGAATTTAATCTTT 31746 30 100.0 37 .............................. ACTTTTATATTGCTCATTATTTCACCTCAAACATTTC 31679 30 100.0 35 .............................. CCTTTATCTCCTTTAGCACCTTGGATACCTTGGAT 31614 30 100.0 34 .............................. TCTATTGCACTAGACAGGCTGTCTTTTTTATCGG 31550 30 100.0 37 .............................. TAGAATCTTTATATTTAATTTCCATGAACATTTTAGA 31483 30 100.0 36 .............................. ATTGTTCCTGTTCTAATTTAAATTCTTTAGTCAATT 31417 30 100.0 36 .............................. TAAAGTTCGTTAATTTTTTGTATATTTTTTATGGTT 31351 30 100.0 36 .............................. TTTTGGACATAATAAAAACACTTGCCATAATATTTA 31285 30 100.0 36 .............................. AAATATATTGTATTATAACCTTCTATCTCATAGCTT 31219 30 100.0 35 .............................. GAAACATCTGTCGCTGGATCGTCGGGGCTTCGTGG 31154 30 100.0 36 .............................. TGAGCCAAGCCTAGTGAATAGTGTGAGGGTAGCTAG 31088 30 100.0 36 .............................. GGTGGTATATTGTTGGGGTCCTTAATTATTTTTTCT 31022 30 100.0 34 .............................. TTAAACCAAGTTAAGAATGAATCTATTAAATTAG 30958 30 100.0 37 .............................. GATCCTGGTGATAGGTGTATTTTAGGCTTCACATATA 30891 30 100.0 37 .............................. TTAAAAACTAACATAATTTACAATAATTAAACTCTTC 30824 30 100.0 36 .............................. TTTTTATTCATTTCTATTCCACCTTTTTTTATTTTA 30758 30 100.0 36 .............................. TCTACTCCAATTATTTGTTTAAGCCTTAATAACTCG 30692 30 100.0 34 .............................. TTGATCTATATGACAATATAAAAACTAGAGTAAA 30628 30 100.0 36 .............................. CTATAGCTAATGCCCCAAGTATTTTCTCCAAAATTG 30562 30 100.0 37 .............................. TCTCCTAGTATAGCACCCACCACAGCTTTAGCATAAG 30495 30 100.0 37 .............................. AACAAATGGCTACAGTTGTAGAGTATGGCAAGAGATA 30428 30 100.0 36 .............................. TAACTTTTTTTACTTCTTTTTCAATTTTGTAGTAGT 30362 30 100.0 37 .............................. TGTATCCTTTATTGTGTAGTTTTTTAGGTGTATTAGG 30295 30 100.0 36 .............................. TTTATTTTTTCTTTGTCTAATGTAAGAGTAATAAAG 30229 30 100.0 35 .............................. TTATTAATCTACCTACCTTTATTCTTTATTAGCTT 30164 30 100.0 35 .............................. TTAATATAACTTTGTCAAGTATTATTTAATAAATA 30099 30 100.0 37 .............................. CGGTCGTATTCTAGTATGTGGTATTAGATATTATATA 30032 30 100.0 35 .............................. ACAGAATCGATGCACCTTGTAACCCTTGGTATCAC 29967 30 100.0 34 .............................. TCTATCGTAGGTTCTTCCGGATCTATAATCACGG 29903 30 100.0 34 .............................. TCAATTAGAGACTAATAATATTGAAGCAATGCTA 29839 30 100.0 37 .............................. TCTATTGTCCATTCTTTTTCTATGCAGCTACAACTTA 29772 30 100.0 35 .............................. GGGGTTCTTGTGGTCCGACTTAATTTTTCAACTAG 29707 30 100.0 34 .............................. TATACTGTATTTTTATTAGTCTTTAAAATTGAAG 29643 30 100.0 36 .............................. GTAGACATATAAGTTGTTGTGGGTTCAAATTGGATA 29577 30 100.0 34 .............................. TTAATTTTATAATAAGGTTTATTATCCATTTATA 29513 30 100.0 37 .............................. TTTGTTTTTTACTAAAGTTTATAAAGTACCTGCATAT 29446 30 100.0 36 .............................. TCTGTCAAAAATCAAAGTTAGATGATTGGTGTGAGC 29380 30 100.0 35 .............................. TCATCTGTTCTTATACAAGAAAAAAATCCTCCTGC 29315 30 100.0 35 .............................. GTATGAAGATTATAAAAGCATACAGGTCTTTAAAA 29250 30 100.0 35 .............................. AATAAAGCTGGTTGAGGTTATTTATGATTCTAACA 29185 30 100.0 36 .............................. GAGTTAAATACCTTGGAAGATTTCTTAAATTCTAAC 29119 30 100.0 35 .............................. AAGTTACTTGTATATCCTAGTTTATCCATTTCAAT 29054 30 100.0 34 .............................. GACATATTTTTAAACCTAATTATCTTTTTAGCGG 28990 30 100.0 35 .............................. ATATCTAATCCAATTGATATATCCATAGTGTTTTT 28925 30 100.0 36 .............................. AACTTGTCCACCTTATTATTACCAAACTTCTCTGGA 28859 30 100.0 35 .............................. CCTGACATTTATAAATCCTACGAATAAAAAGCTGA 28794 30 100.0 36 .............................. TAAGTACTTTAGGTGCCAGCATTCTCACTCCTAGTT 28728 30 100.0 36 .............................. CATATATGTACAATCCTTTTATTGTACATATAAACC 28662 30 100.0 35 .............................. CTTTCCAATGTTAAGCAAAAGTATGGTTACAAATG 28597 30 100.0 36 .............................. GTCCATGTGCCATTTATTTTATATTTGCATTTATAT 28531 30 100.0 36 .............................. AGCCTAATTTATTAACATGTGCTAAAACTCTGGATT 28465 30 100.0 35 .............................. CTAGCGTGCATCGGATAAGGCTGAACATTTATAAG 28400 30 100.0 36 .............................. CTTCCAATAACCTTTAACAACCCATTTTTAACAGCA 28334 30 100.0 36 .............................. TACAAGGCGAAATCATCATCCGGGTTCCCAATCTAT 28268 30 100.0 36 .............................. CAGAGTACCCTAAATTGCTTGCTCAAGCGAACAAAT 28202 30 100.0 35 .............................. CAAGTACCAGAAGGTACTATATCAAAGGATACTGC 28137 30 100.0 34 .............................. ACATCATGACCAAGTATTTTAGCAGCAGTCTTAA 28073 30 100.0 36 .............................. AAGTAAAGCTTTGGAAGATACCAAAGATTTTAATAA 28007 30 100.0 35 .............................. GCAAGTAATATCGTGGTGGGCTCGTGTGTATCAGT 27942 30 100.0 35 .............................. TTGTCTTTTCTACACTTAAGGTAATCAGTCTTTTC 27877 30 100.0 35 .............................. GCATCTAAACCCATATCAGTCACCCATGATTTAGG 27812 30 100.0 36 .............................. TGTAGTTTTCTTCTCCATTCCTCCATGGTAAAACCT 27746 30 100.0 35 .............................. GTGGCATTTATGGAGCAGTTTTTTAATTCTTCATC 27681 30 100.0 36 .............................. ATTTTAGAAGCTAGTGTAAAAAGATTTATAGTAACA 27615 30 100.0 35 .............................. TCCCTGGCTGTATACAGGTCTTCTTCTGTAATGTT 27550 30 100.0 35 .............................. TTGTTTACTATAAAAGTGCCTATGATCGCCTGTTC 27485 30 100.0 35 .............................. CCAAAGTTATTAGGACTTTGAGAAGCTTGACCACT 27420 30 100.0 34 .............................. CACCAAGGAGGTGAAAAATAGTGGATAATACTAA 27356 30 100.0 36 .............................. ATAAGAAAGGGATGGGGTAATGGAAATTAATTTTCC 27290 30 100.0 35 .............................. AACATTTATTCAATATATCCATATTTCACATCTGA 27225 30 100.0 37 .............................. ATTTCACCTCGCTTATTAATTCTTCAAGTTCATTAGT 27158 30 100.0 35 .............................. AAAGGAACGTCAACATAATTTAGATTTATTTGAAG 27093 30 100.0 35 .............................. AAATAAGGAGGTGAGTAATATAAGCGCAGATTTAG 27028 30 100.0 34 .............................. GCATCACACAGTTCAATCTTAGTTGGGGAATTAG 26964 30 100.0 34 .............................. CAAACAAGACCTATCGGCATTGGCGGTATTTTAG 26900 30 100.0 37 .............................. TATGGATTATTAATATTGCCACTATGGTCCACTTCTT 26833 30 100.0 35 .............................. AATAGATGGTGGTCCAATGACAAGTGATTCTTTTA 26768 30 100.0 35 .............................. CAATTTATTTCTCCTGCAGTACAACAATTATCCCA 26703 30 100.0 36 .............................. TGTAAGGATACTCATAAGTTTTAAGCTCGATTTCTG 26637 30 100.0 36 .............................. AATTCTAAAACTCGAACATGAAACCGAACCATTGTT 26571 30 100.0 35 .............................. CAGAAAAAGCTACTAAAAGAAAATAAGATAACAAA 26506 30 100.0 36 .............................. AGCACAGAGCAGTTCAATATAATGCTTCAGTCCAGC 26440 30 100.0 37 .............................. AGCGAGTAGAACTTATGAATAGTTAGAGGTGAACTAT 26373 30 100.0 36 .............................. CCATCATAATCTATTTTTAAAAAACTTTTAGTTTCT 26307 30 100.0 36 .............................. TTGACTTGTAAATGTCCATCACATGAGATTCCTTAA 26241 30 100.0 34 .............................. TTATGATGCTGCTGGACACAGAGGATACCATTAT 26177 30 100.0 37 .............................. TTGTTAATTCTTTTATAACCATTTTATACATTATAAA 26110 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ===================================== ================== 108 30 100.0 36 ATTGAACCTTAACATGGGATGTATTTAAAT # Left flank : ACCTTAACATGGGATGTATTTAAATTTTTCTATGTCTTCTTTAGTATAATTATAAAATTC # Right flank : TGTTTTCTTTGGCTCCCAAATCCTTCAGTTTATTCTATTCAATCTTTTAAAGTCCACTTAAAAGTGATTCCCCTTGATAGGTAACCCCTTCCGCCGCAACAACCTATCTTGAATTTATCCGCTCTTATTACACAGTGTAAAAGAAATTAATAAATTAATTAATTATTAGTAATAATTTTTCCTCTTATTGCACATAATATTAATCGTAAAGCTTAACTTAACTACTAAATTAAATATAGGAGGTCTACTTATATGAAAGAAAAGTCCTATGCCTTTAAAAATGAAAGGGGGGAGCTTATAAATTACATTGTTAAAGAGTATCTTTCGGTTAATAGCAGTGACTATGTAATTATGTCACCTGAAAATAAAGCTACACAGCTGGAAGTTTATAAGTTTAATCTTGAAGATGGTAATGAGTACCTAGATGCTGTTAAAAACCAAGGGGAGCTTAATTTAATAAAAGCTTCTGCAAAGACTATTTAATTTAAGCTTTACATAAG # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTGAACCTTAACATGGGATGTATTTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:73.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [0.00,-2.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [68.3-78.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.64 Confidence: HIGH] # Array family : NA // Array 1 6399-62 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAHLDI010000006.1 Clostridium algidicarnis strain CM017 contig00006, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================= ================== 6398 30 100.0 34 .............................. ATAATTTAACCCTAGAAGTGTACGCTAATATGGG 6334 30 100.0 36 .............................. TAAGCACTTGTTCAACACTTCTAGTACCCTCTCTTG 6268 30 100.0 37 .............................. TAAATTTCAATTGGTTCAACATTTTTATTTTTATATA 6201 30 100.0 36 .............................. AAGATATAGGCGAACTCTTTTTATTTTTTTGGCATT 6135 30 100.0 34 .............................. TTTCTTTCATAGAATTATTAAAATCTTTATTAAA 6071 30 100.0 35 .............................. CTAATATCGGACTTTATATCCACTGTAGATGTTAA 6006 30 100.0 36 .............................. ATAAAGTTGTTAGTTTCTTCAACTCTCAACCTTTCA 5940 30 100.0 36 .............................. TGTTGTACATCTGTATGTCTGTCTATAAAGGCTCTT 5874 30 100.0 36 .............................. AGAAAATTTTGCAAGCGACCTTTTATTATTACAGTT 5808 30 100.0 34 .............................. TTGATTATAGGTTTTTACTTTGGTGCAAGTTCCA 5744 30 100.0 35 .............................. ATAATAACTACAATTAATCCAACTAGCTTAAAATC 5679 30 100.0 34 .............................. CTACAGACGGATTAGAAGGCCAAAAGACAGTTAA 5615 30 100.0 36 .............................. TTCTAGGTCTTGCCTTGCCCTGTGGTTCTCCATCTA 5549 30 100.0 35 .............................. TTCGTATTCCAAAGATATATAAACCCAGCTACTAA 5484 30 100.0 36 .............................. ATAAAGTTGTTAGTTTCTTCAACTCTCAACCTTTCA 5418 30 100.0 36 .............................. ACCCACATGTCGCCACGCCCATGTTTGGAAAAGTCC 5352 30 100.0 36 .............................. TCTATTTCGTTGAATGCAAGCATCGCAGCTGCACCA 5286 30 100.0 37 .............................. TTTTTATTTTCTAAAAACCCCTTTAAAGTTTTGTGAG 5219 30 100.0 37 .............................. TCTAACAGCAGCCACATTAGTGGGTATCCTTCTATAT 5152 30 100.0 36 .............................. CTACAGAGGTTACTGAACCTATAAAAACAGGATGGC 5086 30 100.0 34 .............................. TCATCGAATTGCTTGACATAACTATTTTATCACC 5022 30 100.0 34 .............................. CTGAAAAAAGCTACTGTTAATTATGCAAAAGCAG 4958 30 100.0 37 .............................. CTGTTTGCACATATATCAATATGGTATTCTTTTACTT 4891 30 100.0 35 .............................. AAAAAACAACGTGACATATATATTTATCACTAATA 4826 30 100.0 36 .............................. TGGTACTAGATACGAAACTTGCAAGGCGGTTCATGC 4760 30 100.0 35 .............................. ACTTAAATTCTAAAGCCTTGGTGCCTGTGAACCCC 4695 30 100.0 35 .............................. TTTTTTATGAATATATTAGATATAAGTGCTAGTTC 4630 30 100.0 36 .............................. AAATGTGGATTTGGTGAATGCATTAAACGGCGAATT 4564 30 100.0 35 .............................. GACGTAGAGAACAATAAAACCAATCCATCTGTGGT 4499 30 100.0 35 .............................. GGTAATGTTATAACTGTATCGTCTTCATTTAGCCC 4434 30 100.0 36 .............................. AATTTATTTAGATCACATAGTATTATATAAAGAATA 4368 30 100.0 35 .............................. CCTAAGTTTACACTTAAAACGTCGTAGCCTAACAA 4303 30 100.0 36 .............................. TATTAAAAATCTCCTTCTTATTTAAATTATTTTTCA 4237 30 100.0 35 .............................. GACATAGAATTACTTACAGGTGTGCCTGTTGCAAA 4172 30 100.0 36 .............................. TTTAATAGAAAAAAGGAATTTATATATAAATTTATC 4106 30 100.0 33 .............................. CTTTATTGTTATTTAAAATGTGTAATACAGCCT 4043 30 100.0 36 .............................. CATTTATATAAGGCCTGTTGTGTCAAATTCTTCTGT 3977 30 100.0 35 .............................. TGTCTATTGGTTCTCTGCCACTTATCTTGCAGATC 3912 30 100.0 36 .............................. GTTTAGAAAAAGATTAGTTGAAGAAGTTACAAATAG 3846 30 100.0 35 .............................. TGCTCTTAACCTCGGCTGATGAATAGTTGGAAAAC 3781 30 100.0 37 .............................. AAAAAAATATAGAAAAGCATTGTAAGAGCGAATACCT 3714 30 100.0 35 .............................. TGCTTAAACGAAGTGACTAAGGCAATAAGTAATTT 3649 30 100.0 38 .............................. TTATCAGAACTTGCAAACTCACTCATTCTAGTAAAAGA 3581 30 100.0 35 .............................. TCACAGGTTTAAAGTTAACCTTGAATTTTTCTAGA 3516 30 100.0 35 .............................. AAGTTCAATATCTTTTCTTCGGCTTTCATCTTTTT 3451 30 100.0 37 .............................. TCTACTCTAAACATTGCTTCTCTTAAACAATCTCTAG 3384 30 100.0 36 .............................. TATCCTCGCTGGATTGCTTTTAGCTCCCACGAAAAT 3318 30 100.0 36 .............................. GATAACATCTAAGATATGGCAGACAGATATAGATAC 3252 30 100.0 36 .............................. TATTATACTTGTCATCAATGGATTCATGCCACAAGC 3186 30 100.0 38 .............................. AGATTTTCTAACCAATTATACTTATTACTTACAGTAGT 3118 30 100.0 36 .............................. GACGCAGAGGGATTAGCTATAAGAAACAATGCTATA 3052 30 100.0 37 .............................. AAATTAGAATTAAGTATTACATATTGGTCTTGTTTTT 2985 30 100.0 39 .............................. AGCCATTATGGAAAAGGGAGGTTTAGACCTAGAAAAATT 2916 30 100.0 36 .............................. GAAACAAGCCGTTCTTTTTTATCAGCGTTGCTATTC 2850 30 100.0 36 .............................. ACTGTTCTTTCAATTTCATAAAGTCTATTTGCAAAT 2784 30 100.0 37 .............................. CTTGTGAAAGGCTTAAAAGAAGTTTCATCACCGAACA 2717 30 100.0 36 .............................. ATAACGGGGGTACATATATCTTCTGTTGGGCTGTAG 2651 30 100.0 36 .............................. AGAGAAAATGCAAAATATTTCTTTTGTGCCATATTA 2585 30 100.0 36 .............................. CCAGTAGTATATTTCTGTCCTTGGAACTCCATCATT 2519 30 100.0 38 .............................. AATAGAATCATAAAATTAAGATTATCATCTATGTTTAT 2451 30 100.0 37 .............................. ACTTTAAAGATGATACTGTTGTGGCACTGGATGGCTT 2384 30 100.0 36 .............................. ACTTTAAAGATGATACTGTTGTGGCACTGGATGGCT 2318 30 100.0 35 .............................. ATTATATTTGAATTTGAGTTGGTTTTAACACTAGA 2253 30 100.0 35 .............................. AGCATAAACACACACTTCACAGTTGATATATAATC 2188 30 100.0 37 .............................. TAAACTTGTCCATCAAAACCCCTACACACCTTACTAG 2121 30 100.0 35 .............................. TGCTCTTCAATTTCTATAGTTGGCTGTGTCCGATT 2056 30 100.0 36 .............................. CTCCCTATGCGTTGCGTGTGTTATACATATTATTGT 1990 30 100.0 36 .............................. AGACCTTGTGGAGATATTATCCACTATAAAAGGTTA 1924 30 100.0 37 .............................. TACGCGTCGAAGACATAGTCGAACTCTTTTTAGATTT 1857 30 100.0 36 .............................. TTGAAATTAATATTTGAATATGCATACTGCCTTATA 1791 30 100.0 36 .............................. AAAGATTGGGTATTGGCTACAAAATACACAGATGAT 1725 30 100.0 36 .............................. ACATTAATAGTTTTTAAAACTAATATAAACAATTAA 1659 30 100.0 35 .............................. AAGTTATTCCATTGTGCTATGCCCTCTATAAGTTC 1594 30 100.0 34 .............................. TGTAATTACTTACCCTCCATGTATAGCAGCCCTT 1530 30 100.0 35 .............................. TTAATTGTGTTGCGTTATCTATTGCCTTCTGGAGG 1465 30 100.0 36 .............................. CCTGCTTGGTAAACCCTTTTCCCTACTCTTTTAATT 1399 30 100.0 35 .............................. AAGTTTTTACATCTAATAAAAACCCTTTGAATCTT 1334 30 100.0 36 .............................. TATCCTAGAAGAAAATGACCTACTATGTAAACATTA 1268 30 100.0 36 .............................. CCATTAATATTTTTCATATATAAACTCAAAGAACTG 1202 30 100.0 38 .............................. TTTTCAAAGTCATATTCTTTTATGGGACTTTCTAGAGT 1134 30 100.0 34 .............................. AAGACTTGGGCAGTAGCCATTAGACGTATATTTA 1070 30 100.0 36 .............................. ACAGAATCGATGTGACTTGTAACCGTTGGTATAACT 1004 30 100.0 36 .............................. GTCAGGTCTATAGCACCTTGTGTAACCTTGTCAGAA 938 30 100.0 35 .............................. CAAAAACTTTAAATTCGTATCTTTGATAAGTATTA 873 30 100.0 36 .............................. AGAGGACCTTTGAGCTTTCTAAACCATGATATTCTC 807 30 100.0 36 .............................. TATCCATCTGATTATAAAGGAAAAAAAGATTTTGGA 741 30 100.0 34 .............................. ATAGGATAATAAAATTAATACCACTTGAAAGTTC 677 30 100.0 36 .............................. TTTTCTATGTCTTCTTTAGTATAATTATAAAATTCA 611 30 100.0 35 .............................. ATACTTCCGTTCTGAAATAGCATACCAATATTACT 546 30 100.0 35 .............................. TTATACTCTGTAATGTAAAAAAACACTTCATAGGG 481 30 100.0 34 .............................. AAGAGTTGCTAATGCGCTAAATATTGAATCTAGT 417 30 100.0 35 .............................. TGGTACTATAATTGTATATACATATCTCTATACAT 352 30 100.0 35 .............................. ATGGACGTTTGATAATAATGACAGTTGTTGTTGGG 287 30 100.0 35 .............................. ATTGATATTCTAAAGTTATCAACATTGTATCCAAT 222 30 100.0 35 .............................. AATAACAATCCTCTCTAATAAAAATTTAACAAATT 157 30 100.0 36 .............................. AAGCTTTTCTTATCTCTATACTTCATTTCTAGTAGA 91 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ======================================= ================== 97 30 100.0 36 ATTGAACCTTAACATGGGATGTATTTAAAT # Left flank : AAAATATTTATCTCACTTTCAAAAATCAGTATTTCGTGGTGAAATAACAAATTCTAAGTTAATACTTTTAAAAAAGGAAATTGAAAATATAATTGATCCTTCCACAGACTTTGTATGTATTATAAAGCTTATGAATGATAACATCTTTGAAGAAGAGACATTAGGCAATGGTGAATCCACTGGTGAAGACTTAATAATTTAACATTCTTTAAATTATGATAATCATGTTGTAGTTTCAAGTTATTGTCATAGCCATTACCTTCTTTTGTACATTAAGCATAGCATCATAAATCATCATATAAAACTTTCTTATTTATATAAATAATCATCCCAGCTAATTTATACGTCCAAAGCCATAAGCCCTAATGAATCCAACCTTTCAGGGCTTATATACTTAATAAATCGATAATAGATATTTTCCCTGGGATAAATTCTTCAGAACCCTTTAATAGGAACGATTTAGTGATATAATAGAAATAAGAAATGGCTTAAATGCTGTG # Right flank : TTTTTCTATGTCTTCTTTAGTATAATTATAAAATTCAATTGAACCTTAACATGGGATGTATT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTGAACCTTAACATGGGATGTATTTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:73.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [0.00,-2.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [76.7-70.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.37 Confidence: MEDIUM] # Array family : NA //