Array 1 8695-7144 **** Predicted by CRISPRDetect 2.4 *** >NZ_UENJ01000002.1 Streptococcus intermedius B196 strain G1552, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 8694 36 100.0 29 .................................... TTAAATGAATGAATATACGTTGGAAGTTT 8629 36 100.0 29 .................................... TACAACGGTAAGCCATACATTAAAACTAC 8564 36 100.0 30 .................................... ACTCTTTTTCAAATCTTTTACGATAGTTAT 8498 36 100.0 30 .................................... AATCTACATTGGAAAAGATTATTAATAATC 8432 36 100.0 30 .................................... AGTTAGAGGTTGTAACATGTAATTCGATAA 8366 36 100.0 30 .................................... TTATAGATAAGCCAAAACATGAAAAACAAG 8300 36 100.0 30 .................................... CAGTAACGGACACACCAAGCGTTGACTTAA 8234 36 100.0 30 .................................... TGCGGTCGTCGTACCAAGGTTCATATGTGG 8168 36 100.0 30 .................................... CGAGTTATTCTTTTCATAGCTTCTTCTGCA 8102 36 100.0 30 .................................... TCCATATCTCGGCCAAATCATTTGGACTTA 8036 36 100.0 30 .................................... TGGTACGTGGAATTTAGGATAAGTTCCCCA 7970 36 100.0 30 .................................... TTGGTATAAATAAGTCTGATCTCATTGAGA 7904 36 100.0 30 .................................... AGGAACGTAATACCAGAGATAGTACTTTAT 7838 36 100.0 30 .................................... TTAATAATATAAATGTTGACAATTGGATTA 7772 36 100.0 30 .................................... TAGGTAAAGCAATAGCGAGCACAAGGCGCG 7706 36 100.0 30 .................................... ATTAAAGGATTGAATCCCTGCGGCAACCGC 7640 36 100.0 30 .................................... GGGCAGTTTATCCGCTTGCAACACTCGCAC 7574 36 100.0 30 .................................... GCCACGTTAGCTTTGTGGATTAGAAACAGA 7508 36 100.0 30 .................................... GTAAAAAGTTCCAAGAAACTTGGGACGGCA 7442 36 100.0 30 .................................... GAACAAGCACACGCACACGGAAATCGATTT 7376 36 100.0 29 .................................... AAATGAGGGAAGAATGACAATGGCTATAG 7311 36 100.0 30 .................................... CCGGTTTATTGTTAGGTGGATTGTCTGGCA 7245 36 100.0 30 .................................... AAATTATTAAACGTAAAATGCCACGTCCTC 7179 35 77.8 0 ..................AA-..C.T.G.A.....T | C [7148] ========== ====== ====== ====== ==================================== ============================== ================== 24 36 99.1 30 GTTTTTGTACTCTCAAGATTTAAGTAACTGTAAAAC # Left flank : ACGATTACTTGAATTATTGCTCATTTGTAAAATGTTGCGAGCAACTAGAGGAGATGGCCGACAATTACAATAATTTTAGTGTCATTATTTTCCCGTCAAATGAAGGCTATCTTTATTTGAATCGCGAGAATATGGAATACGTCAATATTGTTTCTGATTTGGTTGAACATTTTTATGAATTTTCTTTTATGTATGAAAGGTTTATTGGTCAATATCCTACTAACGACGTACCTACAGAAGATGATTTCATCGTCTCTTTGCAAAAGATTTCACCATATTTATTTAGTAAAGACGTGACACATATGAGTTTATCTATCCAAGATATGGTAACCTTGAAAATTATGAACAGTTTATACCATTACAACAAGAAAATTCATTTTGCTTATAATCCACCTACTCAATTATTAATTAATTTTTTAAAAAATTAAGATTGACAAGCTCATCAAAGGACTTTATAATCAATGTAAGGGTACAAAAATCAAAAAATTTTTTAATTTGAG # Right flank : TATAGAACTCATTATTGGGCATTATTTATGTAAAAGAAATTTAATCAAATAGTTATCTATGCAAGATATTAGTGGAATTGTAATTTAGGTTGAAATGTTTTATAATGAAAAGGAACAAGTAATATTAGGGGGATTTCTAATGGAGAGAAAAATAAAAAAATCAGTCGTTGCGACCGGCTTAGCTGCAACGACAATCATTTCAGGTAGTCTATCACATGCAGTAAATGCAGAAGAAGCAAAACCAAAATCCACTGAACCAAAGACATCTGAAAAAATTACAAAACCAGTTACAGAATCAGATATTCAATCAGCAAAATTGGAAGCAAATGCTGCGAAAGTTCAGAAAGATACGCAACAGAAAGTTGTAGATCAAGTAAAAGAGGATGTAAATACTTCAAAGGAAGCAGTAGCAAATAACAAGAAAGCCGTAGCAGATGCAGAAACAGAAAAAAATGCAGCGACCTCAGAAGTGATTAGAACTGCAAAAGAAAAAGTAAAAA # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTTGTACTCTCAAGATTTAAGTAACTGTAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:72.22%AT] # Reference repeat match prediction: R [matched GTTTTTGTACTCTCAAGATTTAAGTAACTGTAAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-1.20,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [9-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [80.0-76.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,4.91 Confidence: HIGH] # Array family : II-A/C [Matched known repeat from this family], //