Array 1 325-54 **** Predicted by CRISPRDetect 2.4 *** >NZ_FWPG01000041.1 Klebsiella pneumoniae strain VRCO0392, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 324 27 93.1 32 --........................... TTGAGTGACAGAGAGATTGACCGCCTTGTTTT 265 29 100.0 32 ............................. GTCAGATCACGTCAACCACGCTTGATTTTACC 204 29 100.0 32 ............................. CTCACTAACGCCGTTGCCTGCGATAGCTGATG 143 29 100.0 32 ............................. GTGATCGGCCCGGCAATGCGTGAGCTAATCAA 82 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================ ================== 5 29 98.6 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : | # Right flank : GTTGAGTGACAGAGAGATTGACCGCCTTGTTTTGTGTTCCCCGCGCCAGCGGGG # Questionable array : NO Score: 5.99 # Score Detail : 1:0, 2:3, 3:0, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [36.7-0.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.68,5.24 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 184014-181121 **** Predicted by CRISPRDetect 2.4 *** >NZ_FWPG01000002.1 Klebsiella pneumoniae strain VRCO0392, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 184013 29 100.0 32 ............................. GCGATCATGCCGTAGTCTTCGATCACGTAATC 183952 29 100.0 32 ............................. TTTGCCTTCCTGTCTGCAGAGGCGCGGACAGG 183891 29 100.0 32 ............................. CGTAGCTAAAATTAACTGCATTCGGCGCACCT 183830 29 100.0 32 ............................. CCAGCTCAATTTCCGCCTGTCCCGCCAGCGCC 183769 29 100.0 32 ............................. AATGCAGCAACCGGCAAATATATCGCCGGTAA 183708 29 100.0 32 ............................. CCGCAATAACAAAAATAAATGAGGGTTAAAGT 183647 29 100.0 32 ............................. GTAAATGGGAATGAGTAGAAGAGCGTCATTGG 183586 29 100.0 32 ............................. ATTAAATTTTTCGGGTAAAGAGAAATTGCGAA 183525 29 100.0 32 ............................. CTGCGAGCTACCCTGAATTTCAGCGACAGGGG 183464 29 100.0 32 ............................. TAGTGCCATATATTATCCTCTGCGGTATGACT 183403 29 100.0 32 ............................. GGCATCTGTTGTGTAATGTTGAGTTTTTTTCA 183342 29 100.0 32 ............................. CAGGTTAAACATGTAAAAAATGACCGTCGCCG 183281 29 100.0 32 ............................. CACATTGCCCGGTCTGAAAAGTATTTGAAAAT 183220 29 100.0 32 ............................. CCGGAACACCACCAGTAACAGCTACTGTAGGC 183159 29 100.0 32 ............................. TGACCCTGTTGATTTTGTTACAGGTAATACGT 183098 29 100.0 32 ............................. TTAACCTCGTCGTTCTGGTTTCCGCCCAGGAT 183037 29 100.0 32 ............................. GAACCTGAATTCGAAGGGTGGGTCATCCTTCC 182976 29 100.0 32 ............................. CCGTCGAACGGCGGTTATATCCATCTTGAGTC 182915 29 100.0 32 ............................. ACCGATCCCACAATTGCGGCGGTTGAGATTGA 182854 29 100.0 32 ............................. GTTGTCAGTCAGGGAAAATCTATCCGCAGGGG 182793 29 96.6 32 .G........................... TTGAGTGACAGAGAGATTGACCGCCTTGTTTT 182732 29 100.0 32 ............................. AACTGAATGTTCCAAATCCGGTTGGACGACCA 182671 29 100.0 32 ............................. TTCAGCAGCGCGCTCGTCCCCCTCCTGTCGGA 182610 29 100.0 32 ............................. CTCTACTACGATAACGGATCCCACGCGGGCTG 182549 29 100.0 32 ............................. GCTGCCAGCCCATTCCGTAATTGCCTGTTTCA 182488 29 100.0 32 ............................. GCGAATATAGGCATTAATGCTTTTAATAATAT 182427 29 100.0 32 ............................. CTCCGTCACCAGTTCTGTGCTATCCGGCACAA 182366 29 100.0 32 ............................. TCACGTTTGCAGAACTCGCGGAGGAAGAAGAA 182305 29 100.0 32 ............................. GATCCCCCGGAGGAGACTGATCAAACCACTCG 182244 29 96.6 32 ............................C CGCTGGTTAATGGGCTTCCCGGAAGGGTGGGC 182183 29 100.0 32 ............................. TCTATCGCAACCACCGCTGAGGCGCTGATTGA 182122 29 100.0 32 ............................. CCGCTCCACGGTGAGCGGCTGTTCAATGTAGT 182061 29 100.0 32 ............................. CATCACGCGCTGGCCAATGTGTTAAACCAAAT 182000 29 100.0 32 ............................. GGCATCATTCTCTTCGCTACTCCCGCCGATCA 181939 29 100.0 32 ............................. CGGAAATTTTGATTAGTTGAATCTGTGCCATT 181878 29 100.0 32 ............................. CCGACTTGGGACGAGGATCCGGCGGAATGTCG 181817 29 100.0 32 ............................. TAATGGCAAAACCATGACCTGATCCGGGCGTC 181756 29 100.0 32 ............................. CCTGAATCTTCACTTCGTCGATCATTCTGCGC 181695 29 100.0 32 ............................. GGTCAAAAGGTTCATTCGAGCATCGAGTTGCA 181634 29 100.0 32 ............................. GTAACGCAGACGGCGAACGTCGGATCCATTGG 181573 29 100.0 32 ............................. GACCAGAAAGCCTGGGCATTGTTCCGCTCATT 181512 29 100.0 32 ............................. CCCCCGGCCGCGTGGCCGATTGCCATTACCGC 181451 29 100.0 32 ............................. TTAATACCAGGGGGCAGGTTCAGCAGGTCCCC 181390 29 100.0 32 ............................. CCGCTTTAACCCGCTCCGGCAGATCCGGGTGA 181329 29 100.0 32 ............................. CGCGCTGCGAATTTGTTGGTCGATTTCGATCT 181268 29 100.0 32 ............................. CAGACAGACAGCAGGCAGCAAACAGGGAAGAC 181207 29 100.0 29 ............................. GGGTTCACTTGGGTGAAACTGAACTAACT 181149 29 75.9 0 ...........ATTC...A......G..C | ========== ====== ====== ====== ============================= ================================ ================== 48 29 99.4 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : GTGCTGTCTGCTGGCGAAATTGAACCGCCTCAACCACCGCCGGATATGCTGCCGCCGGCGATACCCGAGCCCGAGTCGATGGGAGATAAAGGGCATCGAGGGCATGGCTGATGAGTATGCTTATGGTGGTGACGGAAAATGTTCCACCTCGCCTGCGAGGACGGCTCGCAATCTGGCTGCTTGAGATCCGCGCTGGGGTATATGTTGGTGATACCTCAAAACGGATCCGGGAAATGATCTGGCAGCAGGTGATACAGCTAAGTGACGGTGGAAATGTCGTGATGGCCTGGGCGACAAACAGCGAATCAGGTTTTGAGTTTCAAACCTGGGGAGAAAACCGCCGTATACCGGTAGATTTAGATGGCCTACGACTGGTTTCATTCCTTCACGTTGAAAATCAATGAGTTGGATGTTCTTTAATAATGTGAGATTGTTGTGATAAAGTTGGTAAATTGTTGTGTGCTTAAAAAGCTATTATAAAACAGTAATATATCTTTAGT # Right flank : GTCCACTAACGTTATCGATCCTGAGGGTGGTACGAAAGCTTGCGGAGAATAAATATCGCTACCTGCCGCTCTAGCGATATCACTGTTTTTTTACCGTCTCCTGGATCGCGCTAAAATCCGGCTCCGGGCAATCCCGACCAAAATTTTCGGCCCATGGGAACGGGGCGCCGTACTTAACATAGCGCTGATACAGGCGTTTGGTTAATTGAGCATCCCGCCCCCATACCCATCCTGTTGCATTACACAGCACGGCAGCATAGGCCTGTGATTTATATGGCAACAGGTCGGCCGCTTTTTCCGCCAGCGTCACCGCCTGCCAGCGATAGTGTAAGAAATGACTGTCCTGTTTTAGCAGGGATCGCTGAACGCGTTGCCGTTCGCCATCACTTATCCACGATGTCACGGCCGAATTATCTTCCGGTCCCTGGTTGTAATAGGGCCATGAATACCCGCCTCCATACAGCGCAAAATCGGGCGCCATCTCATAGCCTGTCAATTCC # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [7-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [53.3-76.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //