Array 1 21090-24076 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAGFEE010000012.1 Acinetobacter baumannii strain 16008 scaffold12.1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================================== ================== 21090 29 96.6 31 ............................T TTAGGTGTCACAGTGCCAAAAACATTACAGA 21150 29 96.6 31 ............................T GAAACAGATTCGGGAGCCGAAGCTCCCGATC 21210 29 96.6 31 ............................T CTAGGGCTTTAAATAACTGAGCGTTTGCTTT 21270 29 100.0 31 ............................. CGTTTGTTGAATGCAGACGTTTTAGACATGG 21330 29 96.6 31 ............................G CCTGTTTGCTGTATTAGTTCTTCACGGACCT 21390 29 96.6 31 ............................T CCAAGCAATTATTCGCTATTTCGACAATCAA 21450 29 96.6 31 ............................T CAATTGGAACGATATCAGGCTAATAACTACG 21510 29 100.0 31 ............................. AGTAAACGTAATGAGCAGTTACAAGCTGCTA 21570 29 100.0 31 ............................. ACAACGGGTGAACCTGTTACGCCAAAACCCT 21630 29 96.6 31 ............................C TGATGCTCAGGATCCAAATGCACCTGATGTA 21690 29 96.6 31 ............................T TATGATGCTGTAGCGTCTCAAATCATGTCTG 21750 29 100.0 31 ............................. GTTACCACAAGTGATAACACAGCAAGACCAA 21810 29 100.0 31 ............................. ATTCGGATCTGATTAACTGGACTGTCGGTCT 21870 29 100.0 31 ............................. TTCACCAGCCTCGGCTAGACTTGATGCTCCT 21930 29 96.6 31 ............................T TTAACCGAGATCAAGAAGTAATTGCTTGGGC 21990 29 96.6 31 ............................T ACAATACGACGTGATAATGCAACTAAAGCCC 22050 29 100.0 31 ............................. CGGTAAAATTAAGTTACCTGCTAAACTTGTG 22110 29 100.0 31 ............................. ATCAAAGCCTTAATCGCTAAATCAACTGCTA 22170 29 96.6 31 ............................T TTTGTTTATACGGTTAATAAATCAGTACAAT 22230 29 100.0 31 ............................. TTACACAGGCATGGCAATGAAAGTGTTCTTT 22290 29 96.6 31 ............................C CTCGTGGAAAAACTTAAAAGCCATCTTCGTA 22350 29 96.6 31 ............................T TCATCTAAATGTTTTTGACGTTCAGCTTCAG 22410 29 96.6 31 ............................T AGACAGCTCATTTAATCCGGGTGAGAAACAG 22470 29 100.0 31 ............................. GTTCAGCATTCCCCTTCGGGGTCAACGTCCA 22530 29 100.0 31 ............................. TTACCCCTCCTTACTTTCTGCTTTAACTTCT 22590 29 100.0 31 ............................. AAACACCAAGCCATAAAATTAATTACAGCAA 22650 29 96.6 31 ............................T GTTTTGCTAATTTATCAATATCGATTTTCAC 22710 29 93.1 31 ...AC........................ CAGGGGTCAAGTTCAGAAGATTTACGTTACA 22770 29 82.8 31 ...GC.......CC..............G GTATTAGTGCGAATTGGCTTTTAGCCCACGC 22830 29 89.7 31 ....C.......G...............T TAAATGCTCAACTATTTCTGTAGCTAATGGA 22890 28 82.8 31 ...GC....T...-..............T TCAAATGATTTAATGAGCTTGTAGCCATTTT 22949 29 89.7 31 ...GC.......T................ CGTCTTCTAATGATGGACTTTAATCCAATAT 23009 29 82.8 31 A..GA.......TC............... TCTCACTGAAGATATGACCATCACTTTCTTC 23069 29 82.8 31 ..CGC.......CC............... AGCCATTTACTTTGATAAAGCGTCACATAGC 23129 29 96.6 31 ............................T AGGAAATTCTATCGGCCCAGCATCTACAAAT 23189 29 100.0 31 ............................. AGAGACACATCGTTAATAATCTCTTGTGCGG 23249 29 100.0 31 ............................. TGAGCAAATTATCAATTGATCTATCTGCAAG 23309 29 89.7 31 ............CC..............T AGACGGTGTTACCTGTAGGCGGTGTCTACTG 23369 29 89.7 31 ...TC.......C................ TCGTTTGAATAATATGGACAATCCAGCCAAT 23429 29 86.2 31 ....G.......TC..............G CAGCATCAAACGAGATATTGGCTAACATATT 23489 29 79.3 31 ...G......A.CC...........C..C AAATAGTTTTAGCTATCTGAGCATTTAATTT 23549 29 89.7 31 ....G.......C...............T TCATCACGTAGCCTTTTACACGCATCTTGCG 23609 29 93.1 50 ....................C.......T GTACGCTGAGTATTGATATTGACATTCAGGGCATTCAGAATTTGGCGCTC 23688 29 89.7 30 ....G........C..............C CAGTTTGCTGAAAATCACCAATACGGTCTT G [23712] 23748 29 79.3 31 ...TC......TCC..............G ATTCTATGAGCGTGACCATGACTCTATTTAA 23808 29 89.7 31 ...GC.......C................ TTATCCAGATAAAACCATATCTACAAAGTGG 23868 29 93.1 31 ....G.......................G ATCATCTACAGTGATTGAATAAACGGTTTTT 23928 29 82.8 31 ...GC......TG...............C AACGACGACGCCGTGTGTTTGTTATCGGAAG 23988 29 79.3 31 ...GC....T..TC..............C AAGTAGGATTTGCAGCCCCAATAGTCTTTAT 24048 29 75.9 0 ....G....T...C.A........AT..T | ========== ====== ====== ====== ============================= ================================================== ================== 50 29 93.3 31 GTTCTTCATCGCATAGATGATTTAGAAAA # Left flank : ACGTTGGGCTAAAACGTTATACAAACAACTTGCTAAAGGCTTTGGAGTTGAATTTATTCGTGATGAAGGAAAAAACTCTCAAGACTCTATTGCGGATATAGCCAACAGCTACCTTGATCATGGAAACTATATTGCCTATGGCTATGCAGCAGTTGCTTTAAATGGAATGGGAATTAGTTTTGCCCTCCCTATTTTGCACGGTAAAACACGTCGTGGAGGTCTAGTCTTTGACCTAGCGGACCTAGTTAAAGATGCTTTTGTTATGCCAGTCGCTTTTACATGTGCAGCAAAAGGATTAAATCAAAAAGAATTCCGAATGCAGCTTATTGAAACATGCCAAGACCAAGATATTTTAGATTACATGTTTAGCTTCATTACTGACATATGTAGTAAAATCAAATAAAATCATACATTTAACCCAAATACCTTATAACGAAGTATTTTCACTCATTAAAAACTTATATAATTGATTTTAAGAGTTTTGTTTTAACTTAACTCTA # Right flank : TTTGAATCTTAAAAAGAAAAAACCCCGAAACTTACGTTTCAGGGCTTTTTCGAATCTTGGTGGAGATGGCGGGAGTTGAACCCGCGTCCGCCAGCACTACGCTCGAGAATACTACATGCTTAGATATCGTCTATTGTTTTAACACCAAGTGACCCGACGAACAGGGTACAAGGTGCGATCCTCTAAGTTTGGTATAAAGCCCCGAGGCTTGACTCTATACGGACTTGTGTGCGTGCGCTTCAGTCGGGTTCCCAGACCACAAGTATTCTAGGAAGCGGACAAGCGGCCCTTAGGCAGCTAGAGCGTAAGTTTCGTCGTTTGCGACTATTTAAATGCAAATTTTATTTACGAGAGAAAATGCGCTCTCGGCATGCATCTATGAGTTTCATCACCGGCGTCGAAGCCAATAACATCCCCATGAATGTCTGCACATCATAGCATAACTAAAATAAAATGCTGTGCATTTTATCAACAGTCTGCCACTGATGAACATACTTACA # Questionable array : NO Score: 5.28 # Score Detail : 1:0, 2:3, 3:0, 4:0.66, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.36, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCTTCATCGCATAGATGATTTAGAAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:67.86%AT] # Reference repeat match prediction: F [matched GTTCTTCATCGCATAGATGATTTAGAAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-4.70,-3.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-53] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [81.7-65.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //