Array 1 1893-3108 **** Predicted by CRISPRDetect 2.4 *** >NZ_MWJH01000003.1 Clostridium botulinum strain SU1033 CbotD0113-U21308_3, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ====================================== ================== 1893 29 100.0 38 ............................. GATTCATTATTCGCCATTGCTTATCACCTCGATATCAA 1960 29 100.0 37 ............................. TCACTTTCGCACCCTCCCTGCTGTATTGGTGTATATA 2026 29 100.0 37 ............................. ATATAGCTTTTAATCTGTTTTTTAGAATCATAATCAA 2092 29 100.0 35 ............................. CTGAAGCCTTATAACGTTCCCTAAACTCTGTATCA 2156 29 100.0 35 ............................. ATGGTCTTATATTATTATGAGCTTCTAAAACTAAA 2220 29 100.0 37 ............................. CCGACTTGTTGTTTTAGTTCTGCAAATATATATATAG 2286 29 100.0 35 ............................. TTTTTAGGGAATCTATTAATCTTAAACTCTCTTGG 2350 29 96.6 37 ...G......................... CATTGACCTATTACATATTTATCAAGTTCTTTAACAG 2416 29 96.6 38 ..............A.............. TAGCTTATTGATTCGTATTTACTAGCGATTGTATTAAG 2483 29 93.1 37 ..............AG............. TTTCCACCTAATCTAGTAATACCGTCTACATCAAAGG 2549 29 93.1 37 ..............AG............. TTTAATCTATTAATATAAACTTTTCTACTTTGAACAG 2615 29 96.6 36 .......A..................... GCTGTAATGTCTGTAGTGTACTCCAAAGCGTAGTTG 2680 29 100.0 38 ............................. ACTTCTCTTTGTAATTCTGAAAGAACAAAGGCATTTCG 2747 29 93.1 36 ..............AG............. TTTATAAGAACCAATTTTCTAGCTTGTATCTCTTGG 2812 28 96.6 37 ................-............ CAATAAGCTCCTGCTAAAGTTTTACCTCTTAAATATG A [2825] 2878 29 89.7 37 ...........T..AG............. TATTTATCCACTTTATTACGTTCTACTAACCATTTTG 2944 29 96.6 38 ..............A.............. CAAATTTTATCTATATGATTTAGATTAACTCTTTCAGG 3011 29 96.6 38 .......A..................... TGTACTGTTTGATTAATGTTGTCTATCTGATTTTCAAG 3078 29 89.7 0 .......A......A.............A | TA [3101] ========== ====== ====== ====== ============================= ====================================== ================== 19 29 96.8 37 TTGAACATTAACATGAGATGTATTTAAAT # Left flank : CTAAATCAATAGTAAATGGTGTTTTAGGTACATCTTCAAATGTAACACCTGCACCAAGCGAACCAACAAATAATAATAGTTGGATTAATTTAGATGGTAAAACAGGTACAATAAATACCCCAAGCGGTGTAAATATTAGAGAAAAGAAATCTACATCTTCTAAAATATTAGGGGCTTTACCTAATGGTGCCAAGGTTAATTTATATCGTAAAGAAGGAGATTGGATACATATTTATTATCCACCACATGGGGGTTATGTGTATGCTAAATATATAAGATATTAAATTTAAAAGGTAGTTCCTTAATTGGAACTACCTATTATTTTTCCAACCTACTTTAATTTTAAAACCTATCTTACTCATTGCTATACAAGGGCTTAGGATAGGCTTTTTATATAAATTTTAAATTATCTCAATTGGTTGGAAAATTTTCTTTAGAATCTTGTAAAATCAATACTTCTATGTTATCCTTAAAAATAAGGAATGGCTATTTTACTATGA # Right flank : AATGGTAGTTGTAGCTTATGCTATAGCTATTATTTTTTTATTTTTTATTGGGAAAATTATTGTAATTTATATAAATGTTTCATAAAAAGGTATTGACTTCTTATACTACACGTAGTATAATTATAATTGTAGGAAGGAGGTGAAATAAAGATGGTTGATAAAATTGAAAAAGTCGGTAAAGTGGTGGAAGCACTTACCGACTTGGCACTTAAAATAGGCACTTTACTAGCAGTCATTAAAATGGTGCTAGATAGCCTAAAATAAACCCATAGGGAGGGTAAAACCTCCCTTACTAATAAAATATCACATTAACCATCTTAATTCAACATGAAAAAAAGTTTAATAAAAGAAGCTTTAAGACTAGTAGGTAGTATAGCCTGGTTAATCATAATAATTATTGGCTTAATAATCCTAATAGTGAAAGGAGTATTTTAATTATGAATGATAAAAAATCACCTCAAACAATAGCAAATCAAAATTGGGAGAAAAAAAATAGAGAG # Questionable array : NO Score: 5.74 # Score Detail : 1:0, 2:3, 3:0, 4:0.84, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.64, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : TTGAACATTAACATGAGATGTATTTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:79.31%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-15] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [75.0-78.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0 Confidence: MEDIUM] # Array family : NA // Array 2 458823-458464 **** Predicted by CRISPRDetect 2.4 *** >NZ_MWJH01000003.1 Clostridium botulinum strain SU1033 CbotD0113-U21308_3, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 458822 30 100.0 36 .............................. TGATGAAAAATAATTATGCACCTGGATATTTAAGAA 458756 30 100.0 35 .............................. AAATTTATGGATCTAATACTCATAAAGATGATTTT 458691 30 100.0 37 .............................. TTTATTAGTGCCATTCCCGCTGGAGAGTATTGTGTCC 458624 30 100.0 36 .............................. AATGTTAAAACAGTTACACCAGCTACAAGACCAAAG 458558 30 86.7 35 G.....T.G.......G............. TGGCTTCTTATTGCCTGTTGTATCTTTTCTGGTAG 458493 30 80.0 0 .....G..C...G..AG............C | ========== ====== ====== ====== ============================== ===================================== ================== 6 30 94.5 36 ATTGAACATTAACATGAGATGTATTTAAAT # Left flank : AAAATCACTTGGAAAGCTTTCTATAAAACCTTGTAAAATCAATGGGTATATGATATTCTTAGAAATAAGGAATGGCTATTTTACTATGGTCGAACAGTAACATAAGATGTATTTAAATAGCATATAATCAATTTTCTTACCCTTTTCAGTATGTCGAACAGTAACATAAGATGTATTTAAATTAATAATTTCATTCCTGGATCTAATTTTTGTATTAGTTGAACAGTAACATAAGATGTATTTAAGCAGAGAACTTAAATTTGTGATTTGGTGTGAGTTGCTTACTTCTTGGAGGAGAGGAGTAGGAGTTTCATTAATTGAATTTTTCCAGGTGCAATAAATTTGCGAACCTATTCTAGACGTTGATATATAAGGCTTAGAATAGGTTTTTATCATGTGCTTATGAAAAAACAAAATCACTTGGAAAACTTTTTCTAGAACCTTGTAAAATCAATGGCTATATGCTATTCTTAAAAATAAGGAATGGCTATTTTACTATG # Right flank : AAATTAAAATCCATGATTTTTTCTCTTTAAAGTTGTTTAGTTTTTAGAGCAGCGTTGATAATATATCAATTTTTAAGAGAAGTCATTTTAGACTTCTCTTAAGTGGTATTTTATTTAATTGTATAAAGTACATTAGTTAAAACTTATTTTTTCAAATGTACCCTTTTCTATGTGTAATTCAATATCAATATCTGCTTTTTTATAACCTACTAATTTTATACGATTATTACCTTTTTTTATTGGTAAAGTTAATGATGTTGTTCCTTTCATAGTGGCTTTATCTGTATTTTCTACAAGATTAACAACCGTATTGTCAGGAGATATTAAAACGATTTTTGCCTTTCCACTTTTTACTGATAAGATATATGGAACTTTCAAATCAAAATCAGAACTACTTTCATATGTCCAAATAGTTCCACTTCCACTTAATTTCAACTTCCCTTTATATATTCCAGATTCTATGATTTCATCACTTTTATCTAATCCAAAAGTATCATATA # Questionable array : NO Score: 5.98 # Score Detail : 1:0, 2:3, 3:0, 4:0.72, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTGAACATTAACATGAGATGTATTTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:80.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [0.00,-1.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [10-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [75.0-71.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.78 Confidence: HIGH] # Array family : NA // Array 3 459235-459078 **** Predicted by CRISPRDetect 2.4 *** >NZ_MWJH01000003.1 Clostridium botulinum strain SU1033 CbotD0113-U21308_3, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ===================================== ================== 459234 28 100.0 36 ............................ ATAGCATATAATCAATTTTCTTACCCTTTTCAGTAT 459170 28 100.0 37 ............................ ATTAATAATTTCATTCCTGGATCTAATTTTTGTATTA 459105 28 96.4 0 ..T......................... | ========== ====== ====== ====== ============================ ===================================== ================== 3 28 98.8 37 GTCGAACAGTAACATAAGATGTATTTAA # Left flank : AAATAAATTTGAAATTATTGTTAATGAAGATGAAGTAAGCCAAAGAAAAGCAACTATAGCTTTAGGAATGGGTTTAGGTGAGAAAGGAAGCAGTTTAGGTGCAGGATTTTGTATTTACAGATAAACTTTAAATAGGCGTTTATTTATTATTGTTGAACCTTAATATGGGATGTATTTAAATTTTTCTTAACTTCCTTAAATGCTTACATATTCTTTGATTGAATATTAACATAGGATGTATTTAAGCAGAGAACCCAAATCTATGATTTGGCGTGAATCGCTTACTCCTTCGAGAAGAGGAGAAGGAGTTTTATAAATTGAATTTTTTCAGGCGTAACAAATTTCAGAACCTATTCTAGTCATTGATATATAAGGGTTAGGATAGGTTCTTGTTGAGAATTTTTCGAAAAGTAAAATCACTTGGAAAGCTTTCTATAAAACCTTGTAAAATCAATGGGTATATGATATTCTTAGAAATAAGGAATGGCTATTTTACTATG # Right flank : GCAGAGAACTTAAATTTGTGATTTGGTGTGAGTTGCTTACTTCTTGGAGGAGAGGAGTAGGAGTTTCATTAATTGAATTTTTCCAGGTGCAATAAATTTGCGAACCTATTCTAGACGTTGATATATAAGGCTTAGAATAGGTTTTTATCATGTGCTTATGAAAAAACAAAATCACTTGGAAAACTTTTTCTAGAACCTTGTAAAATCAATGGCTATATGCTATTCTTAAAAATAAGGAATGGCTATTTTACTATGATTGAACATTAACATGAGATGTATTTAAATTGATGAAAAATAATTATGCACCTGGATATTTAAGAAATTGAACATTAACATGAGATGTATTTAAATAAATTTATGGATCTAATACTCATAAAGATGATTTTATTGAACATTAACATGAGATGTATTTAAATTTTATTAGTGCCATTCCCGCTGGAGAGTATTGTGTCCATTGAACATTAACATGAGATGTATTTAAATAATGTTAAAACAGTTAC # Questionable array : NO Score: 5.30 # Score Detail : 1:0, 2:3, 3:0, 4:0.94, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGAACAGTAACATAAGATGTATTTAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:71.43%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [58.3-71.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.68 Confidence: HIGH] # Array family : NA //