Array 1 334380-335923 **** Predicted by CRISPRDetect 2.4 *** >NC_022244.1 Streptococcus anginosus C1051, complete sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ======================================= ================== 334380 37 100.0 35 ..................................... CCCTGACCGTCATCACGACCGTCGATTTATCTTTG 334452 37 100.0 39 ..................................... AGAGGTTATGTATGGACCAACAAACAACAAATCAACAAA 334528 37 100.0 34 ..................................... CAGGACACGGATTTGATTGAATTGCGGCGAAACA 334599 37 100.0 33 ..................................... CCGCTGAAAGTTTGCGAAGCGAATATGTGATCG 334669 37 100.0 37 ..................................... CTTTTCCGAGAGCGTTAACTTTGCACTTATCCAAATC 334743 37 100.0 34 ..................................... GCGACATCGTTGGTATGCTTGGTGATGTCCTTAT 334814 37 100.0 35 ..................................... TGAGTGGACTCTAATACGTTGATAAATCAACTTTT 334886 37 100.0 34 ..................................... CTACTATTGGATACTTCACATCAGGGTCTGCTTT 334957 37 100.0 34 ..................................... CCATTATCTATCACTATAATCTCCAAGTCATCAT 335028 37 100.0 36 ..................................... TTTGTAATTTTTTGAGTATGCGTACCAATCTCATAA 335101 37 100.0 33 ..................................... TAGACCCGTATAAGCCACGTTCTGATTCATCTT 335171 37 100.0 32 ..................................... TGTGGTGTGGTGTGTGTGTGTGTGTGTGTGTG 335240 37 100.0 35 ..................................... TTTATTTCTATAATCACATGCTTCAATAAATTTAT 335312 37 100.0 35 ..................................... TAAGATTTTTCGTTCTTTATATTGTTCGGCACAAT 335384 37 100.0 37 ..................................... AAAAATGCTACTACCATAAGTTCCTCCTATAAGTCAA 335458 37 100.0 35 ..................................... TCAACTTTCCCACCTGGCTGAATCCAACCTTTAAA 335530 37 100.0 36 ..................................... ACAGGAAAGGCGATGTAGAAAGGCCAACCGACAACA 335603 37 100.0 35 ..................................... TTCTAGAGCTCTCTGTTTAGCCTGTACGTTTGCAT 335675 37 100.0 34 ..................................... TGTTTTAGGTGTATTCTTACGACCATAACCATTA 335746 37 100.0 32 ..................................... ACAATTAGTAGAACATCTTGTAAACTGTTTTC 335815 37 94.6 36 ....G........A....................... TCTCTTTACCTTGCAACTTACGGACTTTAATATCCG 335888 36 86.5 0 ....G........A.................-A...T | ========== ====== ====== ====== ===================================== ======================================= ================== 22 37 99.1 35 GTTAATAACCCATGTTACCTCGAGAGGGGACGGAAAC # Left flank : TTGATTCGTTGTTTTGAAACGGAGAATCATAAGGAATTTTTAAGCGGGTATACGGGAGAATAATAATGGGATTTTTTTACAACTTAGACGAAGAGGCGAAAAACTTTGCGCAGAAAAAAACGGTATTTTGCCTTGTTATTTATGATATTATTAGTAATAAGCGACGTCTCAAACTTTCTAAATTGCTGGAAGGATATGGCATGCGAGTCCAACGTTCTTGTTTTGAGATTGATGTTGAAAAAACAAACTATCATCACCTTCTTCAAGATTTAGAAAAATTTTATTGTCAGGAGGAGGGAGACAATATAATTGTTTATGTTGGTGATAAGAAAGAGACAGTCATCTTCAACTCTTATGAAGGAGCAGAAATTCTGGAAGATATTTTGTTTTTCTGAAACTTTTAATTTAATGAAAAATGTGGTAAAATATAGATATGTTTCCAAATCTTGAATAAAACAAGATTTAGGGGTCATTCTCTGAAGCTTGATACAAGATATAGG # Right flank : TAGATAAAAATCGCTCTAGTGGGCGCTTTTTGTTATTTTGAAGTTCAAAAGTTCTTGAGGCAAAATGTCTCTTAGAAGTTTGAATTGCAAAAGAAAACAAAGGCTGTCTATTTTTTGTAAAAAACCCGAAATTTTAGTATAATGAAAAGACTAGAAGTATGAGGTAATGCCTATGGAAATGAAGCAAATTAGTGATACAACGATTAAAATCACAATAAAATTAGAGGATTTAGAGGAACGTGGGATGGAAATGGCAGATTTTCTAGTCCCACAAGAAAAAACAGAAGAGTTTTTCTATGCGATTTTAGATGAGTTGGAAATGCCAGAGAGCTTTTTAGATAGCGGCATGCTCAGTTTTCGTGTGACACCAAAGCCCGACCGATTGGATGTCTTTGTCACCAAGTCTAAGATTGATAAGAATCTGAACTTCGATGATTTGGCAGATTTGCCAGATGTAGAAGAGCTGTCTCAAATGTCTCCTGATGAATTTTTAAAGACAT # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTAATAACCCATGTTACCTCGAGAGGGGACGGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:51.35%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-4.70,-2.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-7] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [66.7-63.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0 Confidence: HIGH] # Array family : NA // Array 2 942073-944023 **** Predicted by CRISPRDetect 2.4 *** >NC_022244.1 Streptococcus anginosus C1051, complete sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =============================== ================== 942073 36 100.0 30 .................................... AAATTGATAGGGTAGTCGATCCAGATACAC 942139 36 100.0 31 .................................... TGAAATCCAATGCAAAACCCTCCTCAAAATA 942206 36 100.0 30 .................................... CTTACAGCTTGCGCATTGGCAATGCAATAG 942272 36 100.0 30 .................................... TGGAACAATTTAGACAAATCAATGTCGTTG 942338 36 100.0 30 .................................... AGAGGAACTCTTTATATTGAGTCCGCAGGT 942404 36 100.0 30 .................................... AAGCTAGCGACAAGCTAACTATGAGTTCAC 942470 36 100.0 30 .................................... CTTATAGCAGCTGCTAAAAACATAATCACA 942536 36 100.0 30 .................................... CTGTGCTTACTTTTTCGACAGTTCTGAGGT 942602 36 100.0 30 .................................... CCAATAACAAATAACAAATTACCTAGAAAT 942668 36 100.0 30 .................................... TATGAATACGAAAAATACTATACAGGGGTT 942734 36 100.0 30 .................................... CGTTGATTTTGGACAGAATAACCCTGTCTG 942800 36 100.0 30 .................................... AGAGCAGAAATTGATGACGAGTATCTAACT 942866 36 100.0 30 .................................... GCATGACTAGGCCAAAGCGCTATCCATATT 942932 36 100.0 30 .................................... ACCGCAAAAGGACACAAAGAAATACCAAAG 942998 36 100.0 30 .................................... TTTCAAAGGTATATATATCAGACTGCTCAG 943064 36 100.0 30 .................................... TTTTTTTGTAAAATAGCTTTTGAATGCTAG 943130 36 100.0 30 .................................... AAAACTCTTTCAATCGTTCTGTAAACAAAT 943196 36 100.0 30 .................................... AAACATTATAAATATTGTTATAATTAACTT 943262 36 100.0 30 .................................... TTTATTTTGAAACAAAAACAAAAGAAGAAG 943328 36 100.0 30 .................................... TTGCCAACGAACTTAAAGAACAGTTAAACA 943394 36 100.0 30 .................................... TATGAAAGATAAAATAGAAATAGCAAAACA 943460 36 100.0 30 .................................... CATAAACTTGTCCAGCCCTTTTACTGAATA 943526 36 100.0 30 .................................... CAGAAGCTACTCTAAAAGATGATACCGAAG 943592 36 100.0 30 .................................... AAATCGGGTGTGGCTGTTGGCTAACCATGA 943658 36 100.0 30 .................................... GGAGGTGTTGGGATAATGGGTGTTGATGCA 943724 36 100.0 30 .................................... ATAGTTAATGGTAAAAATTCCATATAACGA 943790 36 100.0 30 .................................... GAAAGTTACAGCAAATACTTTTGGAAATAA 943856 36 100.0 30 .................................... GAGGTGTTGGGATAATGGGTGTGGATACAG 943922 36 100.0 30 .................................... TTTTACATTTCTATAACAAATCGCGGTGAT 943988 35 77.8 0 ..................-AA..C.T.G.A.....T | C [944019] ========== ====== ====== ====== ==================================== =============================== ================== 30 36 99.3 30 GTTTTTGTACTCTCAAGATTTAAGTAACTGTAAAAC # Left flank : ACGATTACTTGAATTATTGCTCATTTGTAAAATGTTGCGAGCAACTAGAGGAGATGGCCGACAATTACAGTAATTTTAGTGTCATTATTTTCCCGTCAAATGAAGGCTATCTTTATTTGAATCGCGAGAATATGGAATACGTCAATATTGTTTCTGATTTGGTTGAACATTTTTATGAATTTTCTTTTATGTATGAAAGGTTTATTGGTCAATATCCTACTAACGACGTACCTACAGAAGATGATTTCATCGTCTCTTTGCAAAAGATTTCACCATATTTATTTAGTAAAGACGTGACACATATGAGTTTATCTATCCAAGATATGGTAACCTTGAAAATTATGAACAGTTTATACCATTACAACAAGAAAATTCATTTTGCTTATAATCCACCTACTCAATTATTAATTAATTTTTTAAAAAATTAAGATTGACAAGCTCATCAAAGGACTTTATAATCAATGTAAGGGTACAAAAATCAAAAAATTTTTTAATTTGAG # Right flank : TTACAGAACTCATTATTGGGCATTGTTTAATGTAAAAGAAATTTAATGAAATAGTTATCTGAGTAATACATTAGCGGAATTGTAATTTAGGTTGAAATGGTTTATAATGAAAAGTAACAAGTATATTAGGAGGTCGTCTAATGGAGAGAAAAATTAAAAAATCAGTAGTTGCGACCGGTTTAGCAGCAACCACTATTATTGCTGAAGAAGTAAAAACACAATCTACTGAGCCAAAGACATCTGAAAAAATCACCAAACCAGTTACAGAAACAGATGTTCAATCAGCAAAGATACAAGCCGATGCTGCAAAGGTTCAAACAGATGCTCAGCAAAAAGTTGTAGAGCAAGTCAAAGGAGATGTAAATACTTCAAAGGACGCGGTGGCAGATAGCGAAAAAGCTGTTGCAAATGCTGAGGCAGAAAAGAAAGAAGCAACTCCAGAAGTTATTGAAACCGCAAAAGAAGAAGTGGCGACATCAGAGAAGACGGTTACAACAGAG # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTTGTACTCTCAAGATTTAAGTAACTGTAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:72.22%AT] # Reference repeat match prediction: F [matched GTTTTTGTACTCTCAAGATTTAAGTAACTGTAAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [0.00,-1.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-9] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [76.7-76.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0.37 Confidence: HIGH] # Array family : II-A/C [Matched known repeat from this family], // Array 3 1295624-1295388 **** Predicted by CRISPRDetect 2.4 *** >NC_022244.1 Streptococcus anginosus C1051, complete sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 1295623 36 91.7 30 A.....AC............................ CGTTCTGAACGCAAGCAACTTGCTAAAGAG TT [1295614] 1295555 36 100.0 30 .................................... AAAATAAAGTTGTATACGACAAATACCAAG 1295489 36 100.0 30 .................................... CATCATGAGACAGTTACCTAAAGCTATTAG 1295423 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 4 36 97.9 30 GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC # Left flank : AAAGACTTCTAGCACATTGATTTCCAAGTCTGTTGCCAAAGACGGAGGTAAGACAGATTACCGCGGTCAAGTCCGTTTTGGCAAGAACAGTGCTGGTTCAAAGTCTCACATTGAGTGCGACACGATTCTTATGGATGGTGAATCCAGCTCAGATACCATTCCGTTTAATGAAATTCACAATTCAAATGTTGCACTTGAACACGAAGCTAAGGTTTCTAAGGTTTCAGAAGACCAGCTTTATTACCTTATGAGCCGCGGTATTAGCGAAGAAGAAGCAACTGCCATGATTATCAATGGCTTTATGGAGCCAATTACCAAAGAGCTCCCAATGGAGTACGCAGTTGAGCTCAACCAGCTCATCAACATGAGTATGGAAGGTTCTGTAGGATAAAAATAAAAACAGTCGTGAGGCTGTTTTTTTGTGCTCCTAATTGAAATAAGAGAAAGAAAAAAGCACCGAATCGGTGCTCACTTTTCAAGTTGGATACGGACAAAGCCTT # Right flank : ACAATACACTTTAATCATAGGACTTGCAAAATTTTTCAATCGTGCTATAATACTTTTTAGAGACATATCGCTGACTGGAATCTTTTAGAGAGCGCGTGGAGCTGAAAATCGCGCAGAGGAAGGCAGTTGAGACTACTCTGTTAGCTTTTATGCAAACATAAAACGGTGGCTACGTTAGAGCCAATCAGAGGTGTCAACAAACTTTTTTGTTGTACATGAATGAAGGTGGAACCACGTTGCGACGTCCTTTTCGGGATGTCGTTTTTTTTATTTTGTTGAAGGGAGAAAAAGTTATGCTCTATATGATTGGCGGATCACCCTGCAGCGGGAAATCAACGCTCGCTTCCCTTCTTGCTCGGAAGTACGATTTGCTTCATATCAAGCTGGATGATTTGGTAGACGAGATGATGAGTCAAGCAAGTGTAGACTCACGACCGATTTGCCTTCTTAGACAGGACAGAAATCCGGAACAAATCTGGATGAGAAATCCAGAAGAGATG # Questionable array : NO Score: 5.76 # Score Detail : 1:0, 2:3, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:57.89%AT] # Reference repeat match prediction: R [matched GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-0.20,-4.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-7] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [73.3-56.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.68,4.87 Confidence: HIGH] # Array family : II-A/C [Matched known repeat from this family], //