Array 1 23413-23140 **** Predicted by CRISPRDetect 2.4 *** >NZ_LJGW01000325.1 Streptomyces nanshensis strain SCSIO 10429 scaffold307, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 23412 29 100.0 32 ............................. GACATCTACTACACCGACCCGAACCTTCCGCC 23351 29 100.0 32 ............................. GCGACCTCTGTGTACTGCCGAGATGGGACGTG 23290 29 100.0 32 ............................. GCCTCCGGGTCACCCAGCACAAAACCGTAGTA 23229 29 89.7 32 ............C.T......A....... AGCTCCAAACAGGGCATCACCCAGTCCCTGCG 23168 29 89.7 0 ............G.T......A....... | ========== ====== ====== ====== ============================= ================================ ================== 5 29 95.9 32 GTGCTCCCCGCGTCCGCGGGGGTGGTCCC # Left flank : CCAACTGCGGCGTGCGGGCCAGGCCCCGCCGGACCTCGTCGTCGCCGACCACGGCTGGGCCGGCTACGCGGGCCAACAGGGCATCCACACCGTGGGGTTCGCGGACTGCAACGACCCGGCACTCTTCCTCGGCGAGTCCGAGAACACCCTCGCGGTGACGGTCCCGCTGGACGACCACGTCACCGATCCGCGCTTCTACGAGCCCCTCACGGCCTATCTCCTGGGGGCGGCACAGCCGGGTACGGAGTGAGGCAGGGGCAGCCACGGTGGTAGCGGTGGTGGGTGGCGGGAAAACCGTCGTGGTGGTGACACCGCCGTGAGCTTCGCGGTTCCGGATCGGCTGTCTCTACGTCCTGTTGCTTCGGGTGTGAAGTGCGGTTGTTTCGGGGGCTGTTGCGGGCGGAGAGACGCGAGGGTTCAGGGAAACGGGGGCTATGTCCGAATCTGCAGAAGTGGGTAAGAGCGGGGACGTTGCTGGGTAAAGCCGCAGGTCGCCGAGC # Right flank : GGGATCCCCTTGGCGAAGGTGAAGCCGAAGGGGTGCTCCCCGCACCCGCGGGGCTTCGCGGTGGCCACCGCGTCCTCTTCAAGTCCCCTGGTGCGCTTGAGCGATGCGGCACTGAAAACCGATTGCCGCACCCCCGTCGCGCCGCCTAGCGTCCCGCCCATGTCCGTGACCATCCAGGCGATCATCAACGGTGTGCGCGCCGACGCGCGGGGCACCGGCTGGGATTCGCCCCAGCTCGTCGTCCGCCCGCGCGGTCGGGGCAAGGCCCTGGCCCTCCAGGACGTCTGAGGCGCACCTCTTCCGCCGACGGCTTCTCCGGCTCCCGGCCGGCGTCCGCAACTCCGGCCTGTCCGCCGGTGCTTACGCCCGTCCGCCGGTGTTCACGCCTGCCCGGTGATCCGTCCCGTACGGCTGCCGCCTCCGCCGCACGTCCTCGCGTGTGCCCAGGGCCGCCGGTGTCCCATTCGACCGGACAGGCCCGGCGACCCGTGCCGTACGAC # Questionable array : NO Score: 5.86 # Score Detail : 1:0, 2:3, 3:0, 4:0.80, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCTCCCCGCGTCCGCGGGGGTGGTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,0] Score: 0.37/0.37 # Reference repeat match prediction: R [matched CTGCTCCCCGCGCCCGCGGGGATGGTCCC with 93% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.30,-13.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [7-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [26.7-38.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 7605-7755 **** Predicted by CRISPRDetect 2.4 *** >NZ_LJGW01000438.1 Streptomyces nanshensis strain SCSIO 10429 scaffold442, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 7605 29 100.0 32 ............................. CCCGCCGGCGGCCGTGGCGACCGGCCCCGTGA 7666 29 100.0 32 ............................. GTCAACACCCGCGGCGCCATGAGCGCCCTGCG 7727 29 79.3 0 AT...................T...GTT. | ========== ====== ====== ====== ============================= ================================ ================== 3 29 93.1 32 GCGCTCCCCGCGTCCGCGGGGATGGTCCC # Left flank : GGCGCCCGCGAGTTGTGTGACGTGCGGCTTCATGATGCCGCTGGCGGGGACGCTGCGGCAGGCGTTCGGCGTCTGCGCGAACGAGTACAGCCCGGCGGACGGCCACGTGGTCTCCCTGTCGTACGGCTGCGGCGGCCACTCGGAGGCGGCGGTCATGCCGAGGGCGCCCCAGCCGCCGCCCCCGGTGATCGACGAGACGCGGGCGGACGAGCTTTCGTAGTCGGCGGCGTGCGCGGTCGGTTCGTTGGTGGTTCCGGGGGCGGGTCGCTCCGCTGTCCCGTCCCCTCGCTCCGCTGGGGAGACCCCAAGCGTCCCGCCCCCTCCTNGCCCTCTCGTCCCGAGTCCGCCCATGGCCGTCAAATGCCGCTGTGCGTCGGCGGCTTGAGGCCGCCTTCTCTCGTACGTCCGAGCAACTACGGCCGTACGTGGGCCCGTTCGGGAGCAGGACGACGGCGAGTAAAACCAGGGGTGTTGTCGGGTAGAGCCGCTGCTCGACGAGG # Right flank : CCCTAACCGATCCATGCAGGGCCGTAGTTGCCTGGACGCATGAGCGAGACGGCTCCAAGCCGCCCACGCACGGCGGTAGTTGACGGCGGTGGGCGCACCCCGACGAGAGGGTCAGACGCGCGACGGGACGGCCGGAGGGGGCGGGACGCGCAGGGACACCGGAGCGGACCGCCCCCGGAACCACAACGCACCGCCACGCACCCCGGACCGCCCCCGGAACCACAACGCACCCCGAGGCGACCCACACCCGGCCCGAGCCGTCAGGCGGATGCCGTAGCGTCCACCGGACACCGCGAGTGAAGGAGAGAGCGGCCATGGCCCTGGAAGAACCGCCGGGAGGCGGAGACGTGTTCGGGACGGCGCGGCTGCGGCGTGGTGTGCTGGACGCCTGGACCGCCTCGCCCGCCCGGTTCCGTGAGGACGCCAACGCCGAGCAGGAGCTGGCGCTCGGCGGCTACCGGGACCGTCTGGTCATCGAGTTGGCGCAGAACGCCTCGGAC # Questionable array : NO Score: 5.01 # Score Detail : 1:0, 2:3, 3:0, 4:0.65, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCGCTCCCCGCGTCCGCGGGGATGGTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [1,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched CTGCTCCCCGCGCCCGCGGGGATGGTCCC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-6.40,-5.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [35.0-36.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //