Array 1 110392-108902 **** Predicted by CRISPRDetect 2.4 *** >NZ_KK036635.1 Klebsiella pneumoniae UCI 25 adjcg-supercont1.3, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 110391 29 100.0 32 ............................. CGATCAACGTACCGGAACTACTCTGCAGACCA 110330 29 100.0 32 ............................. GTTGTCAGTCAGGGAAAATCTATCCGCAGGGG 110269 29 96.6 32 .G........................... TGATTGTCGCTATACCAGCGCTCAAGGAAAAT 110208 29 100.0 32 ............................. GTCAGATCACGTCAACCACGCTTGATTTTACC 110147 29 100.0 32 ............................. CTCACTAACGCCGTTGCCTGCGATAGCTGATG 110086 29 100.0 32 ............................. GTGATCGGCCCGGCAATGCGTGAGCTAATCAA 110025 29 100.0 32 ............................. TTGAGTGACAGAGAGATTGACCGCCTTGTTTT 109964 29 100.0 32 ............................. CGTTTAACGCAGTGCGAAAAATTACGACACCA 109903 29 100.0 32 ............................. AACTGAATGTTCCAAATCCGGTTGGACGACCA 109842 29 100.0 32 ............................. TGCCGGACGTTGTACCTGTGAGTTAATTCTTC 109781 29 100.0 32 ............................. CGATAACCGGGCGTTTCGACTGAACTCACCTC 109720 29 100.0 32 ............................. TTAATACCAGGGGGCAGGTTCAGCAGGTCCCC 109659 29 100.0 32 ............................. CCGCTTTAACCCGCTCCGGCAGATCCGGGTGA 109598 29 100.0 32 ............................. CCCTCCGCTTTCAGGGTGTGGCTGATATCACC 109537 29 100.0 32 ............................. CGCGCTGCGAATTTGTTGGTCGATTTCGATCT 109476 29 100.0 32 ............................. TGGGTAGAGGTTAACTGGTTATTGGTCATTGA 109415 29 100.0 32 ............................. ATCGCGGAGGCCTTCGGTGTGTCTCTTTCCTG 109354 29 100.0 32 ............................. CCGTTGTCAATATCTCCCGGCGTCCGCGCCAG 109293 29 100.0 32 ............................. CTGCAGGTAAATGACTGGATGGGGGAAGAGGT 109232 29 100.0 32 ............................. CAGAGGTCCTTATCTTTTCAACGTCAAAGTCG 109171 29 100.0 32 ............................. GCAATCCCAGAGCGCGAATATCTTGGGCTCTC 109110 29 100.0 32 ............................. GTGATCGTCATGGATATCACTGCCGTTCCGTC 109049 29 100.0 32 ............................. CAGACAGACAGCAGGCAGCAAACAGGGAAGAC 108988 29 100.0 29 ............................. GGGTTCACTTGGGTGAAACTGAACTAACT 108930 29 75.9 0 ...........ATTC...A......G..C | ========== ====== ====== ====== ============================= ================================ ================== 25 29 98.9 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTACGCAGCCTTGA # Right flank : GTCCACTAACGTTATCGATCCTGAGGGTGGGCACGAAAGCTTGCGGAGAATAAATATCGCTACCTGCCGCTCTAGCGATATCACTGTTTTTTTACCGTCTCCTGGATCGCGCTAAAATCCGGCTCCGGGCAATCCCGACCAAAATTTTCGGCCCATGGGAACGGGGCGCCGTACTTAACATAGCGCTGATACAGGCGTTTGGTTAATTGAGCATCCCGCCCCCATACCCATCCTGTTGCATTACACAGCACGGCAGCATAGGCCTGTGATTTATATGGCAACAGGTCGGCCGCTTTTTCCGCCAGCGTCACCGCCTGCCAGCGATAGTGTAAGAAATGACTGTCCTGTTTTGGCAGGGATCGCTGAACGCGTTGCCGTTCGCCATCACTTATCCACGATGTCACGGCCGAATTATCTTCCGGTCCCTGGTTGTAATAGGGCCATGAATACCCGCCTCCATACAGCGCAAAATCGGGCGCCATCTCATAGCCTGTCAATTC # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [7-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [50.0-10.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,5.65 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 112139-111195 **** Predicted by CRISPRDetect 2.4 *** >NZ_KK036635.1 Klebsiella pneumoniae UCI 25 adjcg-supercont1.3, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 112138 29 100.0 32 ............................. CGGATCCGTAAGGTTTTTGATAAAAAAAGCGA 112077 29 100.0 32 ............................. GCAAAAAAGTGGGGGTGTGTATGTCTACAGGA 112016 29 100.0 32 ............................. GGATACGCCTTCGGGCTTGTGCCGTTTACGTC 111955 29 100.0 32 ............................. GATTTTGCTAAGTGCCACAATATTCCCCCCAT 111894 29 100.0 32 ............................. GCATTTCAGAGAGTGCACACCCGCTTGATGCG 111833 29 100.0 32 ............................. GCCGAAAAATCGTGCCGTGACAGCAGTTTGTG 111772 29 100.0 32 ............................. CAAAATCTCTGCGAGGAATTGATTTCGGGTCT 111711 29 100.0 32 ............................. GGGCTGCCGCACGCCTGGGACGAGTCGAGCCC 111650 29 100.0 32 ............................. CCGCAATAACAAAAATAAATGAGGGTTAAAGT 111589 29 100.0 32 ............................. GTAAATGGGAATGAGTAGAAGAGCGTCATTGG 111528 29 100.0 32 ............................. ATTAAATTTTTCGGGTAAAGAGAAATTGCGAA 111467 29 100.0 32 ............................. CTGCGAGCTACCCTGAATTTCAGCGACAGGGG 111406 29 100.0 32 ............................. TAGTGCCATATATTATCCTCTGCGGTATGACT 111345 29 100.0 32 ............................. GAGACTATTATGCGAAAAACTATTACTCCCGA 111284 29 100.0 32 ............................. CCCCCGCGCACATGCTTAAACGCGCTATCACG 111223 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================ ================== 16 29 100.0 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : GTGCTGTCTGCTGGCGAAATTGAACCGCCTCAACCACCGCCGGATATGCTGCCGCCGGCGATACCCGAGCCCGAGTCGTTGGGAGATAAAGGGCATCGAGGGCATGGCTGATGAGTATGCTTATGGTGGTGACGGAAAATGTTCCACCTCGCCTGCGAGGACGGCTCGCAATCTGGCTGCTTGAGATCCGCGCTGGGGTATATGTTGGTGATACCTCAAAACGGATCCGGGAAATGATCTGGCAGCAGGTGATACAGCTAAGTGACGGTGGAAATGTCGTGATGGCCTGGGCGACAAACAGCGAATCAGGTTTTGAGTTTCAAACCTGGGGAGAAAACCGCCGTATACCGGTAGATTTAGATGGCCTACGACTGGTTTCATTCCTTCCCGTTGAAAATCAATGAGTTGGATGTTCTTTAATAATGTGAGATTGTTGTGATAAAGTTGGTAAATTGTTGTGTGCTTAAAAAGCTATTATAAAACAGTAATATATCTTTAGT # Right flank : GGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [0.0-76.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.51 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //