Array 1 236881-237287 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_CP029010.1 Candidatus Sulcia muelleri isolate SMCRYFAC chromosome, complete genome		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence             	Spacer_Sequence                           	Insertion/Deletion
==========	======	======	======	============================	==========================================	==================
    236881	    28	 100.0	    17	............................	TAAAGGCTAATTTAGAT                         	
    236926	    28	  96.4	    17	...........................C	TAAATTCTAATTTAGAG                         	
    236971	    28	  96.4	    29	..............A.............	ACTTTTCTTCTTTAGAATTAGAAAAAGAA             	
    237028	    28	 100.0	    26	............................	AATATTTTAATTATTTTAATTTAGGG                	
    237082	    28	  85.7	    17	.TT.......A............T....	AATGTTCGAAGTTAGAG                         	
    237127	    28	  92.9	    42	.G................C.........	AAAGTTTTAATTTATCTAATATAAAAGAAACTAAACTAAATT	
    237197	    27	  71.4	    31	..........AAAA.-G.C....A....	AAAAAAACCGATGACTTCAAGTCAAAGATTC           	
    237255	    28	  89.3	     0	...A.............G.....C....	|                                         	T,CA,A,A [237262,237268,237273,237282]
==========	======	======	======	============================	==========================================	==================
         8	    28	  91.5	    26	AAATTAAAAATTTTTAATAAATTGAAAA	                                          	       

# Left flank :   AATAAAAAAATTGATAACAACTCTTAATTTAGAAAAAAAAAAATTATTAATTATAATTAATAATAATAAAAAAGATAAAAATTTTTTGATTGCTTCTAGAAATTTAAAGTTATTAAATGTAATTTCAATTGAAGAATTAAATATTTTTTATTTAGCCAATTCTGATTATTTAATTTTTTTTGAAAGCGTTTTTAAAAAATTATTTAATATTAAGTAATTATTATGTTATGTTAATAAATATAAAAAAAAAATTTTCCAATAAAAAATTGGATCCTTTTTTTACTTTTAAAGTACCTTTATTTTATAATAAAAAAGAAATTAAAAAATTAATATATAAAATATATAATATTAATTTTAAGAATATAAAAACTATGATTTATTGTAAACGTACTTTATATTGTAAACGTACTTTAAAAAAAAGTAAAAAAGGAGTTTTAAAAAAAAAAAGAAAGAAATTTAAAAAAGTAATTTTAAAATTAAAACAAGATTATAATTTAAAT
# Right flank :  ACATTTTCCTGAAAAAACTCTTTCTAGAGGAAAAAATAAAACAGGAGGTAGAAATAATTGTGGAAAAATGACTATAAGATATAGAGGGGGAGGCCATAAAAAAAAATATAGAAGAATAGATTATAAAAGAAATAAATTTGGGATTCCGGCTATAATAAAATCTATAGAATATGATCCTAATAGATCAAGTTTTATATCTCTTTTATTTTATAAAGATGGAGAAAAAAGATATATTTTATCAATTGATGGATTAGAAATAGGAAAAAAAATTATTTCAGATAAATATACTATTCCGGAATTAGGAAATGCAATGTATATTATGAATATTCCTTTAGGAACTATAATTTCTTGTGTAGAACTTTTTCCTGGAAAAGGAGCAATTTTTGCACGTAGTGCAGGGGCATATGTGCAATTAATTGCAAAATCAGAAAAATTCTCTACTATAAAATTACCTTCTGGAGAAACTCGGATGGTGTCTTCAAACTGTATGGCAACTATAG

# Questionable array : NO	 Score: 4.70
# 	Score Detail : 1:0, 2:0, 3:3, 4:0.59, 5:0, 6:0.25, 7:-0.70, 8:1, 9:0.56,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     AAATTAAAAATTTTTAATAAATTGAAAA
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         F Score: 4.5/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:96.43%AT]
# 	Reference repeat match prediction:         NA 
# 	Secondary Structural analysis prediction:  NA [0.00,0.00] Score: 0/0.37
# 	Array degeneracy analysis prediction:      F [1-14] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: F [91.7-78.3]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [5.18,0   Confidence: HIGH] 

# Array family : NA
//