Array 1 855995-855428 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP065143.1 Pectobacterium versatile strain DSM 30169 chromosome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 855994 28 100.0 32 ............................ AAAGGGCAATCGATTCTGGGAGGCCCGTAGCA 855934 28 100.0 32 ............................ GATGCAATTTTTCTGACATTACATCAGAGCAG 855874 28 100.0 32 ............................ AACGTGATTCCGTGTTCATCAAACCACATATA 855814 28 100.0 32 ............................ GTCAGTTACACCGCCAGAGGGCTGGCTGGAGT 855754 28 100.0 32 ............................ AGAGAAACGCATTTCTCCCGCGCCAGCCGCGA 855694 28 96.4 32 ...........T................ TTGATTTCGCCGCCGCTTGGCTACCGTCGAGG 855634 28 96.4 32 .............C.............. TGTAACCAGCTTCGCTGGGCTTCCGGCGGGAT 855574 28 96.4 32 ...........T................ AATGTTCCAGTGATTTGAGAGGAACTCCTTCG 855514 28 96.4 32 .............C.............. GCAATTGCTGAAATCGATGCACAAGCGGCTGT 855454 27 78.6 0 ...........T.C...T....-...TG | ========== ====== ====== ====== ============================ ================================ ================== 10 28 96.4 32 GTTCACTGCCGCATAGGCAGCTTAGAAA # Left flank : GAGGCGCTCTCTACACTGGAGCAAACGGCCTGGCTGAAAGGATTGCGGGATTACACGCAGGTTTCCGCGTGTACAGCCGTACCTAACGGTGTGAAATTTCGCACCGTGCGCCGCGTTCAGCTCAAGAGCAGCGCCGAACGGTTACGCCGACGCTCGGTCAGCAAAGGCTGGTTGACGGAAGCGGAAGCCGCAGCACGTATCCCCGATGCGGTGGAAAAACGCAGCGCACTGCCGTTTGTGCAAATCAAAAGCTTGTCCAACGGGCAGATGTTTTTCGTGTTTGTGGAACATGGCCCGCTACAGGACGCCCCCGTCGCAGGCCGCTTCTCTTCTTACGGTTTAAGCGCAGAAGCCACCGTTCCGTGGTTCTAACCCTTTTTTAGCGGCCAACTGCAAGCTATTGATTTTTAATTGCAGTTGGTCACCCTAATAAAAAGGGTTTTTCGCCAAAAAAGTCATATTCTCTTTAACAATCTGGTGGTTAGTGTAAAAACTTAACG # Right flank : CTTATCGGGATGCGTCGCTGGCGCGACACATTTCGTGGCGTTATTCCCCGTTGAGCGTGACAACCAGCGAGCGGCTGCCGCCGTGGTTGCGGTGTTCGCACAGGTAGATGCCCTGCCAGGTGCCGATGTTCAGGCGTCCGTTGGTGATGGGGATCGTCAGGCTGTTTCCCAGCAAGCTGCCTTTCAGGTGCGCGGGCATGTCGTCGCTACCTTCATACGTATGGCGGTAGTACGGTTCATCCTCCAGCACTAAGCGATTAAAGAAACTCTCGAAATCCTGCCGCACCGTAGGGTCGGCATTCTCGTTAATCGTCAGCGCTGCCGAGGTGTGCTTGATGAATATCTGCATCAACCCGACGTTTATCTGGCGCAGTGCGGTGACCTGCGCCAGTATCTCGTCGGTCACCAGATGGAAGCCTCTGCTTTTCGGCTTCAGGCGGATTTCATATTGCGTCCACATCGGCGTCCCCTGCTATCAGGCTTCACGCGCCAGAATAGGT # Questionable array : NO Score: 6.00 # Score Detail : 1:0, 2:3, 3:0, 4:0.82, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.92, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGCATAGGCAGCTTAGAAA # Alternate repeat : GTTCACTGCCGTATAGGCAGCTTAGAAA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACTGCCGCATAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [8-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [41.7-68.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 2 864947-869062 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP065143.1 Pectobacterium versatile strain DSM 30169 chromosome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 864947 28 96.4 32 .............T.............. GTTGCGGCCTCGGGCCGATGCGTTGGCCAACC 865007 28 96.4 32 .............T.............. CGGTTGATTCAACGATATTCTTATCGCGCTCT 865067 28 96.4 32 .............T.............. AACTGGGAAAAAGACAAAGGTTCAGTCGGTAT 865127 28 100.0 32 ............................ AATGCGTTCTCGTGCCGATCATCGGAGATTCA 865187 28 100.0 32 ............................ CGTCAGAAACGCCCAGCTTTGCTTCATATTCG 865247 28 100.0 32 ............................ AATGCGTTCTCGTGCCGATCATCGGAGATTCA 865307 28 100.0 32 ............................ GCGCAGCGCAATAGCGACATAATCAAGGGGCG 865367 28 100.0 32 ............................ ACATTCCGTGGTCATGGTGCGGAAGCGAAAAC 865427 28 100.0 32 ............................ TAGAGGATTTGCTGAAGCAGTTTTTAAATTTA 865487 28 100.0 32 ............................ CCGCACCACTGCGGCACATGGGGATTGAGGAT 865547 28 100.0 32 ............................ GCTCGAATGATTCATTCATGCTGCTATCTCCA 865607 28 100.0 32 ............................ TCGCTCTGCAACTGAAGACGCTGGCTGGGAAA 865667 28 100.0 32 ............................ ACGCGCACGGGCTTCACGCTCATGCTCAGGAT 865727 28 100.0 32 ............................ GACACAATTTATCTCGCTCGCGTCTGGAAGGA 865787 28 100.0 32 ............................ CTTAGCATTATTCCGTATTGTGCACCGTGCTC 865847 28 100.0 33 ............................ CTCAGGGAGCGAATCGAAACCATCACAAAGCAA 865908 28 100.0 32 ............................ AAGAAACTGGCATGGAAATTGTCACCGATCTG 865968 28 100.0 32 ............................ GTTCTGCGCTCAATGCCGGACAACTCAGTAGA 866028 28 100.0 32 ............................ TCTACATCATCGACAGCGTACGCGGAAAGTGG 866088 28 100.0 33 ............................ AAAGGATGGACTCGATTACACCCCATCCAACAA 866149 28 100.0 32 ............................ CACATCGACGTGAGCAACCTCCGGCCTGTTGT 866209 28 100.0 32 ............................ TTGTTAGCGATCGGGATATCGGAAATCTCATT 866269 28 100.0 33 ............................ ACGTCACAATCCCCGCGTTGGTTAGCGAAGAAT 866330 28 100.0 32 ............................ GCTGTAGAGAGGGCCGTCAAGGTTCCGATGAC 866390 28 100.0 32 ............................ TGTATTTTTTGAATACGACTTCATCATCTCCA 866450 28 100.0 33 ............................ GTTGTACACACTGAACTCGGCGAAGTTCTTTGT 866511 28 100.0 32 ............................ TCAGAAATCGATTGAGAACTGCCCTGAATCCG 866571 28 100.0 33 ............................ AGAAACGGATTATCTACGGCGGAAAAGGTTGAA 866632 28 100.0 32 ............................ ATGTGCAACGATGATGACGGGATGTTGATTTC 866692 28 100.0 32 ............................ TGTGCGGTGCCAACCTGTGCGATGCCAACCTG 866752 28 100.0 32 ............................ TACATTGGCAGGAGAATTCCCATTCATGTTAA 866812 28 100.0 32 ............................ TGCGCGATGCCGACCTGTTCGGTGCCAACCTG 866872 28 100.0 33 ............................ GACAGGTGGTTTTTTTACGCCTAAATTCAGGAT 866933 28 100.0 32 ............................ TAGCAGCCTTTTTATTGCATCAGATAAATATG 866993 28 100.0 32 ............................ GTCATCAAGTACCACGAATATCAGCAATTTTC 867053 28 100.0 33 ............................ ACTTCCGAAGTGGGCAATGACATCTTGCTTTCG 867114 28 100.0 32 ............................ GTTTCTGATACCGCATGGAAGAAACTGCGCCC 867174 28 100.0 32 ............................ CGACCCCGCTCTCGCTGATATCAATTTTGACC 867234 28 100.0 32 ............................ ACAGCTAATGCAGGGTAAGTGGGCGTCACGTT 867294 28 100.0 32 ............................ TTAAAGAAAAATGGATTGGGATCTGTATAGTT 867354 28 100.0 32 ............................ TCAATTTCAAAACGCCCATCTTGGGTATCAAT 867414 28 100.0 32 ............................ AGGTGAATTACACTCCGGAGGATTACGCAAAA 867474 28 100.0 32 ............................ GTCTGCCACGGGCACACAGGTTCCGATATCAT 867534 28 100.0 32 ............................ TACGCAGATCAGCAAGAGAAGCGCAAGGCTGA 867594 28 100.0 32 ............................ TGAGCAGGAACAACGGGAAGATTCATGCGCTC 867654 28 100.0 32 ............................ ATTACATCAATCTCCTGTTATCAAATTCATCC 867714 28 100.0 32 ............................ GAGAATGCGTACTCTGCTGCCTACGCCATTGC 867774 28 100.0 32 ............................ AGCATGATTATTGAAAATGTTGAACCTTAAAT 867834 28 100.0 32 ............................ TTGAAGCTCAGCCATCGCACCGCGCGACAACT 867894 28 100.0 32 ............................ GCGAACTGACGGCGGAAGAAATCGACCTGATG 867954 28 100.0 32 ............................ TGAAACCCGTTCTGCAATGTGTCGGGCCTGGG 868014 28 100.0 32 ............................ CGATACGGCCAGCGTTCCCAGCTCAGCACCGC 868074 28 100.0 32 ............................ AGCAAAAAGTCAGACGCTGCCCGCTGCGGTGC 868134 28 100.0 32 ............................ GCGTCTGTTTGTTGGCCGCATGATTTTGGGAT 868194 28 100.0 32 ............................ AGACCGTATCCATGCCCTCAGCGGGCACGTCC 868254 28 100.0 32 ............................ TGAGTATTACGGACAATACCGCCGCCGCACAG 868314 28 100.0 32 ............................ CGGAAGATGAATATAAGCAACACACGGAACTC 868374 28 100.0 32 ............................ TCATCAGAAAATCTCAATGTTAGATCCGCGCC 868434 28 100.0 32 ............................ GCCATCGTTAAATCTGGATTCCCACTGCTGAC 868494 28 100.0 32 ............................ ATCGCACCGCGCAGTAGAGGGTGTGACCACAC 868554 28 100.0 33 ............................ CTCCAGCAGCAAGGCAGGGGGCAAGGCCGGATT 868615 28 100.0 32 ............................ GTTCGCGCAAACAAAGAAACCGCGGGCGTGCT 868675 28 96.4 32 A........................... CAGATCACAGACCAACAATTTAGGCGCAGATA 868735 28 100.0 32 ............................ TTTATGAGATAAGTACAAAATTAAAGTGTTTA 868795 28 100.0 32 ............................ AGCTGGCATATCATACGGGATCGTAACTCAAG 868855 28 100.0 32 ............................ CGTATGTTGTGGGGCAAAAAACGCATTTAGTA 868915 28 100.0 32 ............................ TTACCGACCGACGATGCTGATAGACCGGATGT 868975 28 100.0 32 ............................ AGACAGTAAGGGATGGTAAAAATATAACAATT 869035 28 78.6 0 ...........C........T.C.TCC. | ========== ====== ====== ====== ============================ ================================= ================== 69 28 99.5 32 GTTCACTGCCGTACAGGCAGCTTAGAAA # Left flank : GCGTGACGGAGGTGCCGGTTCCCAGCATCACAACGCTGGTATTGGCGATGGGGATATTCCAGTACAGAGACTGGTTTCCTTCTTCCGTGACATATTCGACACGGCCACCGTTAACGAGAATGCGGCAATGCTGGAGGTAATAAACATTGGCGCGTTTGGAATGCAGAATGGTTTTTAAGTCCGAAGGGCTAAAGGCGTTATCCATAATGTATTTTCTGCCGCAATCGATAATAGCTGTGACGCCAGCGAAATAAATCGCAAGCTAATTATTTAATAAGAAAAAATATAATCTTCAGAAAACTAACGAAAATCAGACTATCACAAATATTCTGGAAAAATGGTGGCTGCAAAAAATATTACCCAGACTCAGACCCTTTTTATTTGGCCTATTTCACAGGATTAAAAATCAATAAGTTACCGCTGAGCTGAAAAAAAGGGTTTTTGTGGCGAAAACGGCAATTGCTGCTAATAAAACAAATCGTTAGAGTGATCTGGCAACG # Right flank : ACGACCTTAAGCGCTGTTGTCTGGCTATTATCGAAGTAGTACTGCGCCAGCGCTCACCCTCGTTAAATGACGCATATTGATGGCCTTATTCCGTAACGTTTTTAAGTAATGAGTTTATTTTAGAGGGAATGAAAAATTGTGGGGTCGGCATTATTAACATTTAAAAATCATCATTTTTCCGTTAAAGTTTCCTTATAGGGGAATAGCACGTTGACTTAAGTCAAATTCAAGGGAGTGAGTGACTGTGAAATACGATCCCGTTTTAAAAACGCTTGTGGATGATGACTATCGGTTAGAAGATCATCTTGATTTTAAAAAGCAGCATGCAGATATTAACTATCAGAAATTACATGCTCAACTAAACGAAATAAATAACGATAATATTCATGCCATATTGACTGCGCAGGAAGCGATGTATTTTTTAAAGACGTTATGCACACCCAATCCTAATGACTCCTGGAAAACGGCAATATTTGGTTGTACCGACCCCATCTCATCGT # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCACTGCCGTACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-7] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [58.3-45.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 3 4765216-4763660 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP065143.1 Pectobacterium versatile strain DSM 30169 chromosome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 4765215 29 100.0 32 ............................. AGTACATGGAATCCAAAAGACGGGTTTCCTTA 4765154 29 100.0 32 ............................. TACTGATCCGATCCGCGCTGGGAACCATGCCC 4765093 29 100.0 32 ............................. ACCTGACTTAACCATATCTGCATACTTATTGC 4765032 29 100.0 32 ............................. AGACGTGATTGAGTTAGCAACAAACCCATCAA 4764971 29 100.0 32 ............................. TTCTTTGTCAAAGGGGGCAGTTTATCAGCGGT 4764910 29 100.0 32 ............................. TAAAAACTCGCAGTGGACAGGTTGTAACGCTG 4764849 29 100.0 32 ............................. TCCATCAACGCCGCGTATTACTCTGTATCGGT 4764788 29 100.0 33 ............................. TTGCTGCATGTGCGCGAAATGCCGCAGATCGAC 4764726 29 100.0 32 ............................. CCTATTTGAGCGGTGGCGAGCCTAATTGGTTT 4764665 29 100.0 32 ............................. ATGACATCTTACTGAAGGGGCGCGGTGCTGGT 4764604 29 100.0 32 ............................. GAAAACATCGGCCCTTTCTGGAAGCTCAGCGC 4764543 29 100.0 32 ............................. GTATCATCATCGAATCCAAATGCTCTGGATGT 4764482 29 100.0 32 ............................. CGGGAGTGTTGCGGAGTAATCTGGCGCTACAA 4764421 29 100.0 32 ............................. AGCGGGTGTTGCTATTTCTTGCCGCTAGGGAA 4764360 29 100.0 32 ............................. GCTATGTAGCATTAGTGATGCTGCCCCGAGTC 4764299 29 100.0 32 ............................. TGTTTATGTAGGATATCTTCATCTTAAGATTA 4764238 29 100.0 33 ............................. CGAAACCGGACTCATCTGGCAATTTGAAGATGT 4764176 29 100.0 32 ............................. TACAGTATCCGTCCGGCATGCCGTTGCCTGGC 4764115 29 100.0 32 ............................. CCAACTTTTTGTGGCTCAGTGAGAGTGACCTT 4764054 29 100.0 32 ............................. TAACCAGAGTCATTAGGCCGCTGCCTAGGCTC 4763993 29 96.6 32 .....T....................... CCCAGCACGGTTTCAGCGGTACCGGTTTGAAA 4763932 29 100.0 32 ............................. TTCACGTTATCCGCAGTGGCCGGAGCAAGGAA 4763871 29 100.0 32 ............................. CTGCCGATGATGCGGCGGAGAGTTTTTTATCT 4763810 29 100.0 32 ............................. TACGATTACAAGCGCTGGGCGCTGAGTATCAC 4763749 29 100.0 32 ............................. GCCCGCGATTATTAGCGAGCCGAGTAGTTCAG 4763688 29 93.1 0 .........................T.T. | ========== ====== ====== ====== ============================= ================================= ================== 26 29 99.6 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : TGATTGAGGAAGTCTTGTCTGCGGGTGGCATTACGCCGCCGCTACCACCGGACGATGCACAGCCGCCTGCAATCCCAGAACCGAAACCGTTTGGTGACAGCGGCCACCGGGGGCAGGGTTAAATGAGCATGCTGGTGGTTGTGACGGAAAATGTCCCGCCTCGGTTGCGCGGCAGGCTGGCGGTGTGGTTATTGGAAGTCCGCGCGGGAGTGTATGTCGGTGATACCTCACAGCGGGTGAGAGAGATGGTCTGGCAGCAGATTATCGAACTGGCGGAACAGGGCAACGTGGTGATGGCGTGGGCGACGAATACGGAATCCGGCTTTGAGTTCCAAACCTGGGGCGAAAACCGCCGAATGCCGGTAGATCTGGATGGTTTGCGGTTAGTCTCTTTTTCACCTATTGAAAATCAATAAGTTAGCGATCTTTAACAACATGGAAAAATCGGTAGAATTTTTTATGCCGAAAAAAGTGTTATAAAACAACTCTCTACTTTTAGA # Right flank : AATAGTAGAGGTGTAAATCATAACGGTTTCCTTATTGTCAACTCGTTCCGTTTACGGCATAGTGTTTCCAATTTGGAAACAACAGGAAAGGCATCAGGATGCATGTTATTCCGCGCGCACCTTTCGACACTGCAACCACTCAGTTTCCGAATCAGGCGGCAGCACTTGATGACCTATATCGGGTTATCAAACGCGAAATGTATGCAACGCCGGACGATATGAAAAAACGCTTCCCTAGTCTAGATAGGATGAAATATCGGGAAAAATGGTGGGTTATTGATATTGGTGGCGGGCATCTTCGAGTGATGTTTTTTGCTGATTTTGAGCGAGGGAAAATCTTCATCAAGCACATCACATCCCATGCAGAGTACGACAGGCTGACAGAGTATTACCGGAGGAATAAAGAATGATGTACGCCGACGCCATCAAGGCAGCTAACAACCTGACGAGTATCGTACCATTCCTCGGAGGCAGCACCTCTCGTAAGGATTATGAGGATG # Questionable array : NO Score: 6.24 # Score Detail : 1:0, 2:3, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [61.7-73.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //