Array 1 6937-4660 **** Predicted by CRISPRDetect 2.4 *** >NZ_LSRN01000037.1 Alkalibacterium sp. 20 contig32, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =============================== ================== 6936 36 100.0 30 .................................... GCGTAACAACTTTCACATACTGCAAGCGCT 6870 36 100.0 30 .................................... ACACCGAATTTAATAGTAACGGCTCAGAGT 6804 36 100.0 30 .................................... GTCGATTCTAAAGGGTCGGCCGATCAACTC 6738 36 100.0 30 .................................... ACGTCGCCATTCGTTACAATCGCATAAACA 6672 36 100.0 30 .................................... GTAAAATAATGGCAAGTGAACATTTTTTCA 6606 36 100.0 29 .................................... GTTTTTAATGCAACCGCAGACAGTCGCAT 6541 36 100.0 30 .................................... AATGCAACAAGTGGTTATTCGTCAGACGGT 6475 36 100.0 30 .................................... TTTCCTGCTTCATTGCTTTCTAGATACTTG 6409 36 100.0 30 .................................... AAAAACGATAAAATGATGGCGAAGTTTTTA 6343 36 100.0 30 .................................... TAACTATGACATGCCGTTTACCACCTTCAT 6277 36 100.0 30 .................................... TAAATAACAATGATGTAAGACATAACTTCT 6211 36 100.0 30 .................................... TACCAAATTTAAGTATACAACGGCAACACT 6145 36 100.0 30 .................................... CTTTATGAAGCTATGCCAATACAGTGAGCT 6079 36 100.0 30 .................................... TAAAGAACTTAGTGATAAAGAACGTATTAA 6013 36 100.0 30 .................................... CGACTCAAACAGCACAAGGAGAGACGACAG 5947 36 100.0 30 .................................... TACCCAGATGAAACAGATTACACCACCAAT 5881 36 100.0 29 .................................... AATAATTCCCCTTACAATTACTGGATGGC 5816 36 100.0 30 .................................... ATTCAGTCAGTGATGATACGTCAAAGGTTA 5750 36 100.0 30 .................................... GCGTTCACAATTTGCGGCAATGCAATGACT 5684 36 100.0 30 .................................... CAAGACGGGTTAGCAAGAATTGAAAGTTGG 5618 36 100.0 30 .................................... CGCACAAAAACGGTATCATTTAGCAGAGCA 5552 36 100.0 30 .................................... TAAGTATGAAAATAAGAAACAAAGCACAGA 5486 36 100.0 30 .................................... TTGGTATCGCGGTAATGTTAGCTGTGCCGC 5420 36 100.0 30 .................................... ACAAAGGGCAAACGTTTGCCACTATCCTCA 5354 36 100.0 30 .................................... TGCAAAAAGAAATCAATCCAACTGATGTCG 5288 36 100.0 30 .................................... TTGCTTTTTCAGCAGCCTTCTTTTCACGAA 5222 36 100.0 30 .................................... CTGCTGAATATGCGCCTTACGTTAACTATG 5156 36 100.0 29 .................................... GATTTTGAACAAGAAACATGGCATTGGTT 5091 36 100.0 30 .................................... TCCACGTATTTTGGATCTAATTTATACAAG 5025 36 100.0 30 .................................... GAGACGTTACGATCAGACACTCGCTTTCGA 4959 36 100.0 30 .................................... TATTTAACCGACATTAATGATTACATCGAT 4893 36 100.0 31 .................................... ACGTATTACATCGAATATAAATTTCCAGGTA 4826 36 100.0 29 .................................... CAGATCTCGAAGTGCAAGTGAGGGCCGGT 4761 36 100.0 30 .................................... CATTTTTCTAGTGTCGTTCCGTAGGGTCCT 4695 36 94.4 0 ................................A.T. | ========== ====== ====== ====== ==================================== =============================== ================== 35 36 99.8 30 ATTTTGGTACTCTCTCATCTTTTGGTATAAAGGAAC # Left flank : GATATTGCAGCAAATCAAGCTTACAAAAAAATCTATTCCAGATAAAAGACATTTATTTGTTCTTATTACTCCTGAAAACATTTTAGATACTAATGACTTGGTCAAACTTAATGAACATCTTCAGAAACAAACCAGTCATTTTATTGTCGTAAGTGATTATTCATTTGATGGTCCTGTTAACACAATTTATAATAATCAGATAATTAACTATTCAATAGTTATTAAAAATAAGGACTTAATAAGCAGGTTTCTACCTTTTGTATTTGACGAAGAAGCATTTGATCATAGCTTGAAGTGGTATATAAACCTTGTGGATAAAACCCGTGATAACATCATCAAATTGTCCCTTTCTTCTGTGGATAACTTGGAGCAGTTTATCTATGTTTTTCTAATGATTTATTTCACTCATCTGCCTTTTGTTGTTGATTATAGTGGGATTCCTGCTGAATATAAAAATTTTATTGAATCTGTAATTGAATCTGAGGTATAATTAAGATGGC # Right flank : AAACTAACCATACACGGAGTAATTACAATATCCAAAAGACTCAATCGAAGTAATTATCGATTGAGTCTTTTGGAATAACCTCATATTTCTCTATTATTATTGACGTTCTCTCATTTCTCGTTTTTCTCAAGACAGCATTTCTTATATTTCTTTCCACTACCGCAATAACACGGATCGTTACGCCCTAATTTTTTTGTCATGCTATTCTGATTTCTATTTATCTTCTTACTTGAATCTCTAAAATCCATTTCTTTCAATTCTTTATTTGTATACCCATTATTTATCCAGAGTCTCACATTATTTTTCAGCACTTTCACTAATTGTTTAACCGTTTCTCTTTGGTTTTTACCTATGAAGTCAACATGCATGTGATCAAATACTGACATGACCTGTCTAAAGCTAGCATTCACTTCAATCATGCCTTGAACGTCTTCACAAATATCTGATGTACGTTCTTCGTCTCCGTCCAACACATACTTCAAAAGGTAATCATATAATTT # Questionable array : NO Score: 3.25 # Score Detail : 1:0, 2:0, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTTTGGTACTCTCTCATCTTTTGGTATAAAGGAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,-0.90] Score: 0/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [68.3-73.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.41 Confidence: MEDIUM] # Array family : NA //