Array 1 477266-477095 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACBYI010000001.1 Paenibacillus sp. S150 S150_1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =================================== ================================= ================== 477265 35 100.0 33 ................................... ATCAGGTGTTGCGCTATGCCTATGATCAATTCT 477197 35 100.0 33 ................................... GTTGACTGGTGCCGATCTTGGCCGCAAACTCTT 477129 35 91.4 0 .A...........T...............A..... | ========== ====== ====== ====== =================================== ================================= ================== 3 35 97.1 34 CTGTCGCACTTCGCGTGGAGTGCGTGGATTGAAAT # Left flank : AGGATTTGCGGTAGCGAAGCGGGTGGCGGGGGCAGGTCATTATAATATTATTAGTAAGCTAAAGCGAGGGGAAAAGAATGGTGCATCCGCGGACAAAAGTTAGACACTCATTGCGTGCGGTGTTGGGATTCGTTCTGGCGTGTTGGGGCAGGCTGCCTGGTAACGAGGATAATATTGCGGCCCCGCGTTCATCCTTGAATGACCTTCCCCCGATCAGCCTCCGCCGGGCGGGCAAGCCGGGTTTTGCAGGTAAGGGGCTTTGAACAAAAAAGAACGAGATAAATCAACTGCCCCAGAGATGGCAAAAACAGAAATCCAACGGTGCGAACTCTAAGCTCCCATATAAACCCTGGGAAATCCGCACCTCGGAATTTGGTCGGAAACGGTGTCGAAAAATAATAGATAGTCAAAAGTCAAGGTTTATTTTATACTTTTTGCAGGTGAACAAGCGGAGAAAGCAGACAGAAATGCTGCTTTTGGAAATGATATGCTTTTATCCG # Right flank : AAGGAGATGAAAGAGACATGCAGCAGATTAAGCGAGCAAGGTGATTTTGTTAAGGGGACTCCAATTACGGATGGCAACCGGGAAAAGTGTCGTTTGCATGGTATACTGTTCCGTAGTAGTCGTTCGATTGCGCAAAAAACCCGTTCTTTTGTAAAGTGTTGGTGTGGTAACTTTCTTTTACAGGAAAAGACGGTTTTTTTGCATGGATTTTTAACGGACAACAAAACGGGGCGGTCCAGAAGTCAGTTTTTACTAACTTTCTGGACCGCCCCTTCTTGCTTGCAAGGCCGGTCAAGCCGGGGAAGAAGGCATTGGGCAGTACGCACCTGATTGCGTTATGCCCTGGAAATAGGCTAAGATATAAAAAGGATGGCAAACGTATGTTCCTGCCAGGCCGGTATGCTATAATATTAGGACGGATTCATCAGAAAATTTTGTTATTGGCCCGGAAACTATTACTACAGTAATCAGTAGTTTCTAGAATAAAGCTTTAACTGGGA # Questionable array : NO Score: 5.21 # Score Detail : 1:0, 2:0, 3:3, 4:0.85, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGTCGCACTTCGCGTGGAGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: F [10,6] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-5.60,-9.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [56.7-58.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.28 Confidence: HIGH] # Array family : NA // Array 1 2767-115 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACBYI010000029.1 Paenibacillus sp. S150 S150_29, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ===================================== ================== 2766 32 100.0 33 ................................ CAAGCAGATGGGCTTCGATCGTCCCATCGTCGA 2701 32 100.0 35 ................................ CTTCTGGATTTACTGAGGATGAGGTTGAACTGCTT 2634 32 100.0 35 ................................ TACAATGCTGTGCGAGCTGCCCGCAGCGTGTGGCG 2567 32 100.0 36 ................................ ACATATGGGAGGTATAATTCTTTTTCGGCAGCCTCC 2499 32 100.0 35 ................................ CGGCATCATGGATATTCTACCGAATGGGGTATGGT 2432 32 100.0 35 ................................ TATACCTGTCTTGTCGCTCATACTGGTTATGCCTC 2365 32 100.0 35 ................................ GCTTGAGCAAGGGTAATTGCAAAATCATCGACTAT 2298 32 100.0 35 ................................ CTGGTTACTATGATGCCTCGATGCGCATCAGTCTG 2231 32 100.0 35 ................................ TGTACCCGTTCTGTCCGCACGGCCCGCTGGTAGTA 2164 32 100.0 34 ................................ TCGTAGAGACAATGCTGCAGTTCGATAGCCAATT 2098 32 100.0 35 ................................ CAAAATGTTCAACTCCATTTCAAATTTGATAGAGT 2031 32 100.0 35 ................................ ATTGGTAAAATATAATTCCTGATAATAATCATGAC 1964 32 100.0 34 ................................ TAACTAAGAAAGCATACATATTGCGTGAAGTTTC 1898 32 100.0 35 ................................ CATAAAAAATGCTACCAACGCCAGAATACATGAGT 1831 32 100.0 35 ................................ TAACGTGCACCATGGGTCGCCCCATGCCCCATATG 1764 32 100.0 35 ................................ TATGCATATTCACCGTCCGTGCAGCATCCCATTGG 1697 32 100.0 35 ................................ CCAGCAAGTCAGCCGAAAGCAAGAAATATCAAGCC 1630 32 100.0 37 ................................ CGGTTCTTTATAGAGGGCTACAATTAAGCGTTCGACC 1561 32 100.0 34 ................................ CAACAGCGCCATATTGTCTGCAAGCATGATAGTT 1495 32 100.0 37 ................................ TGGTTTAAAAAGGTCGAAGGATGTGGGATGAACTTCA 1426 32 100.0 36 ................................ GTGATACTCTTGCAGCTCAAGCAATCGCTGTTGTTG 1358 32 100.0 36 ................................ ATCTCAACTGCCCGGCACATCGGGTACGGCGGGGCG 1290 32 100.0 36 ................................ CTTCTGCAAGTTCTCTTGTTGTAATGTCGCCTGTTG 1222 32 100.0 36 ................................ CGCATGCCCTTGGTGACTTCTTCTCCCAGGTTTTCC 1154 32 100.0 36 ................................ ACGAAATTTGGTCCGCAAGAGTCCCAAGATTATTTT 1086 32 100.0 36 ................................ TTGTTGTCATAGTTTTGCTGGAGCGTGGCTGCGGTG 1018 32 100.0 36 ................................ CCCTGGAGCCTGACGCCGCGGGCCATTTGCGCTTTG 950 32 100.0 33 ................................ CCTTTCCCCCACACTCCGGCATGATCCGCACAA 885 32 100.0 36 ................................ CTGTCCACACACAGCAAAATAGCCCTCGATGACCAT 817 32 100.0 35 ................................ GCGAGCAGCAAGGCAGGATGCAGACCCAACAGAAC 750 32 100.0 35 ................................ CAACGCTGTTCCAAGTTGTCTTTTTATAGTGATCG 683 32 100.0 36 ................................ CTTTGCAAAAGTGAGCCAGACCATGAAAGTAACAAT 615 32 100.0 34 ................................ CGCACAAGATATTGCAATGGTGTTACCAGCATTT 549 32 100.0 36 ................................ TATTTGTGGTAAGGGAAAGGAATATGCGAGTGTTGC 481 32 100.0 35 ................................ AATCTTTTGGCTGTCCGTATGGGTCCGCACTGGAC 414 32 100.0 35 ................................ TGACGAGTGCTGCGGGTTACACCGTCTCCCTGACC 347 32 100.0 35 ................................ TTCGGACAGGAACTGTATTGGAGACGCCACGAGAT 280 32 96.9 36 .......................A........ CGCGAGGTCAATTACGAAGCCGGTCCGCTCGATATT 212 32 100.0 34 ................................ TGGAAGGTCACCAATACTGACGGTGATATTAAAT 146 31 81.2 0 ...................-..A.CG.C...C | A [123] ========== ====== ====== ====== ================================ ===================================== ================== 40 32 99.5 35 GTCGCACTCCATGTGAGTGCGTGGATTGAAAT # Left flank : TGCAACTACGACCGCCGAAGGAAGGCGCCGTTTGTCCAAAGTATCCAAGAAATGTCTGGATTATGGACAACGGGTGCAAAACTCCGTATTTGAGTGTATCGTCGATTCCACTCAGTTTCGCAAGTTGAGATATGAACTGGAGGAACTGATTGATACGGAGACGGATAGCCTGCGCTTTTATAACTTGGGAGACAAGCACAAAACCAAAGTGGAGCATATCGGCGCCAAAGCTTCCTATGATATGGAAGCTCCGTTAATTCTGTAAAGGGAAATTTGGTAAGTTCGGTCAAAAAAATATTGCCAAAGCTATTCCAAAAGTGGTGCGAACCCCAAGCTCCCATAAAAACCCCGGGACATTCGCACCTCAGATTTTGTCGAAATCCGGTCGGATTCAGGCGAATCAGTAAAAGTCAAGAGTTCAACCATATTTTTTATAACCAACATGAAAAAGAAAAAGTCGGAATTCATATCTTTGTGAGATCATTCTGTGTTTTTTCGCT # Right flank : CAGCCCACACCTTGACACCAAGATGAGGGCTCCATATTTAGAATGAGATTAGGATTTCAACACTCGACAGATCGGTGGCAACGCGGCTGACCACGGCAAGAACGGGTCCAGCACT # Questionable array : NO Score: 9.23 # Score Detail : 1:0, 2:3, 3:3, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACTCCATGTGAGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: F [9,7] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGCACTCTACATGAGTGCGTGGATTGAAAT with 91% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-2.50,-8.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [8-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [56.7-68.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,10.05 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 2 13261-12350 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACBYI010000029.1 Paenibacillus sp. S150 S150_29, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ==================================== ================== 13260 33 100.0 35 ................................. ACAGTGGATCTGTCCAGAGACGGGGAAGTGCTGGC 13192 33 100.0 36 ................................. CTTGGGAAATCGGAGCGGTAAGAGGCTTTCAGGTGG 13123 33 100.0 34 ................................. AACATGCCATTTCTGATGATGGCGATTGCTTTAC 13056 33 100.0 34 ................................. TTTGATAAATGGTTTTAGAGGGGGTACGGATATG 12989 33 100.0 36 ................................. GAAACGTCTCCGATTTTCCGGCGCTTGGCGCTCAAC 12920 33 100.0 34 ................................. TTTGTAGCTTCACCGTCGCAATTGGCGTGATCCA 12853 33 100.0 34 ................................. CGTATAGAACTTGAGTTCTGTTTTTTTGCATGTT 12786 33 100.0 34 ................................. TCTGGCAAATTTTCGAATGGCGTTGGCCGAATTA 12719 33 100.0 35 ................................. ATCTTTGGTTGTTTTGCCATATCGTCTATCTCTCC 12651 33 100.0 35 ................................. CCGATACGCGAGATTTGTTATCGCAAGCGAAAATA 12583 33 100.0 34 ................................. TGTTTCCCGGTTTGATTCAAGATAATCGATACAT 12516 33 100.0 35 ................................. GTAGCTATAAACGTACCCATCATAGCGTGTTAGTC 12448 33 100.0 33 ................................. ACAACGATGACTGTCAACCACCCGTTAGCTGTC 12382 33 100.0 0 ................................. | ========== ====== ====== ====== ================================= ==================================== ================== 14 33 100.0 35 GTCGCACTCCGTATGGAGTGCGTGGATTGAAAT # Left flank : GCTGGGTTATGGGCTTCTGGCGCTAGAGCTCGCCATGGAGATGCCAATTTCCACTAATTTGTACTATACAATGAAGGCTGCCTCTTCGTGATGAAGGAGCAGCCTTTTTGAAATTATAAAATTTTCGCAGACCACCCGCATGCCGGGATTAAAGTATTCATCCGTGGCGATGCCTGGAGCAAGCATTTCGGTATCAATGGAGCCGAGCTGCTCTTCGGCTGCGGCAATCTTCTGCTCCCAGTAAATCAGTCTCCGGGCAGTTTTGATATTTTGGCAATGAGTGTAGCAAAAAACATTTAAGCGCAAACGGTCAAATATTGGTGCGAACCCCAAGCTCCCATAAAAACCCCGGGAGATTCGCACCTCGAAACTTGATGAAAATTGTCGAAAAACTTGAACATGGCAAAATGTCAAGAGTTGAGTTATACTTTTTTTGAAAGAATGGATGAAAGAAAGGTAGAGTTTTATGCACATCAGGCATGAAAACGTCCTTTTTCGGG # Right flank : TCCTAAATCAATATAATTCCCCTAGGGCGTGTCTGAAAACTATAGATTGCTTCCAAAGCGAAACTATAGCATAATTTGGCAAGGACGAAATCAAAAGGAGCCTTGACATAGATGCTAAGACGCCACGAAATTAGAGACCCGCACTGGGAGCGGATAGAAGCGCTGCTGCCACCCGAAAATACAGGAGAAGGCAGACCCTCGAAGCCCAATCGAATGATGCTAAATGGAATGCTTTGGAAAGTAAAAACAGGCGCTCCTTGGCGTGATTTGCCTGAACGTTTCGGCCCTTGGAAAACGGTATATTCCCGATTCCGTTTGTGGAGCAAAGACGATGTTTTTCAAAAGATATTTGAGTCCTTGAGCAGCGATGCAGACTTACAGGAAGTCTCCCTGGACAGCACTTCCTGTAAAGTTCATCAGCACGCAGCAGGGGCTGAAAAGGGGCTGAAAATGCCGAAACCAACCAAGAAATCGGACTTTCGCGAGGGGGGCGCAACACC # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACTCCGTATGGAGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: F [9,7] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-6.00,-6.20] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [60.0-60.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,4.5 Confidence: HIGH] # Array family : NA // Array 1 119-416 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACBYI010000076.1 Paenibacillus sp. S150 S150_76, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ =================================== ================== 119 30 84.4 35 .A...-T.A.-..................... TACAAAAGCTAGACAATGAAGGTTTGGCCAACCGA 184 32 100.0 35 ................................ ATCGTGGGCGCTCTGTATCCCGGAGAAGCCCCGGA 251 32 100.0 35 ................................ CATGGCGGGCAGTGGTGATGATGTCTATAATTTCC 318 32 100.0 35 ................................ AGATACGTAAGCGCTGCAGCCAGCGAATATTTGTC 385 32 90.6 0 ...........C.C.................G | ========== ====== ====== ====== ================================ =================================== ================== 5 32 95.0 35 GTCGCACTCCATGTGAGTGCGTGGATTGAAAT # Left flank : ATGCGCTCTGTCCACTCATACTGGCGTTGTTCGGCTTTGGTCATCTGGCAAATCTCCTCGATTTAAGATACGCCTATGATCTCATGCTTTGCCGGGGGTTTATAGGTGGGTTAGGTTTG # Right flank : GTGCTACGGTGCCCGTTCATGCGGAGACGGCTGACAATGAAGTGTAGGCGGTGACGGTCCTGCATAAGGAGAGCGGGGCAGAGATCCGGCTGTACGGCGCTTACTATCTGGACGCAACGGAATGCGGGGATTTGCTGCCGCTTGCCGGTGCCGAGCATGTCAGCGGTGCGGAATCACGGAGTGAGACAGGGGAGCCGCATGCGCTGGAAGAAGCGGACCCGCTCGATATGCAGTCGATTACGCACGTGGCCGCCGTCGATTATTTGCCGGACGGCGATTTCACGATTGAGCGCCCTGAGGCATATGACTATTGGCGGAATTATGTTCCATCCTTTTCCCTGTACCCGATCCTCAGTTGGTACGCATCCGATGCGAGTGATACAACGAAGCTGAAGCAGTTCACCATGTTTCCGAATGAAGAGGGGATTGTGTCTCTCTGGGATTATCGGCGGATTGTCGATCCGTCTATCTGGAGCCTGCCGCTGAACGTTGGTGAAGTA # Questionable array : NO Score: 8.81 # Score Detail : 1:0, 2:3, 3:3, 4:0.75, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACTCCATGTGAGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: R [7,9] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGCACTCTACATGAGTGCGTGGATTGAAAT with 91% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.10,-2.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [5-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [55.0-40.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.64,0.78 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //