Array 1 7317-6008 **** Predicted by CRISPRDetect 2.4 *** >NZ_SCOH01000019.1 Chitinivorax sp. B NODE_19_length_101823_cov_11.494878, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 7316 28 100.0 33 ............................ CACGGCGGTTTCCTTCAGCTCGATACCCGCCGC 7255 28 100.0 33 ............................ GCGCTGGTCTGCTGCCGGTGGCACCGTGACCAC 7194 28 100.0 33 ............................ TTACGTTAGTCATTTTTGACTCCTTTACAAAAA 7133 28 100.0 33 ............................ TTTATATCTTATGCGAAGTGCTGCTAAGCCTTT 7072 28 100.0 33 ............................ CGGGGTTGCTAAGTTCATGTGCTATATGTACAC 7011 28 100.0 33 ............................ TTAGTTTCCCGATCAACGCCAAAGGTGGATGGG 6950 28 100.0 33 ............................ CTGATTATACGAACCGAAGTGCATATATTGAGC 6889 28 100.0 33 ............................ CCCAGTGATCTGCCCTACTAGTGCGGCACCTTG 6828 28 100.0 33 ............................ CCAGCCGGTCTAAGACACGGGCATTATCTAAAA 6767 28 100.0 33 ............................ CGTATCTTGCAGCATCCCTCGGTACACTCCGTC 6706 28 100.0 33 ............................ CAGGAAGTGGATTACGCTCGTCGAGTTTGTGGG 6645 28 100.0 33 ............................ CCGCAGATCCCAAATGGCTCGGGGGTGGGTAAG 6584 28 100.0 33 ............................ CTCTAGTTAAAATCCAGACACAAGCGACTACTG 6523 28 100.0 33 ............................ CCATATCAAGGTGGCGATGGAATTCGCACCATC 6462 28 100.0 33 ............................ TTTCTACGGTCCCGTCTGTGCCTGGTCGTTTAT 6401 28 100.0 33 ............................ CCCTTTGGAAATCGCAAAAAGCGCTTTATAGGC 6340 28 100.0 33 ............................ TAACCCGCCTGATACGTATGACGCCTGACTGTT 6279 28 100.0 33 ............................ CTCAGGCCCGTTTCCGTGCCACTTCCCGGCCAC 6218 28 100.0 33 ............................ TCGCCGATAGCTCTTGCGCCGTTTGCGATGGCA 6157 28 100.0 33 ............................ AACCACAGAGCGCTACGTGGAGCGCGCTGAGTG 6096 28 100.0 33 ............................ GAATGTATCAACTTGATACGCAGTGGAGGAATG 6035 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================= ================== 22 28 100.0 33 GTCTTCCCCACGCCCGTGGGGGTGTTTC # Left flank : TGTATAAGGAGCACCTGTGCATCGACTTGGCATTTGCGCTGACTTACGAACTAGCCGGGCGTTACAATAAACAGCTCGTTTCGGCTCGTTTTCGTGAACGGGCGCTGGCTATGGATCTGCTGGCCTGTGCAGTGGACGATGTCCAGAACTTGATGGGAGGCAAACGTGGTCGTCGTGCTCGCTAATGACCTGCCACCGGCTGTTCGCGGGCGCATGAAGCTGTGGTTCGTCGAGCCACGCGCCAATGTCTTTGTTTCTGGTATTAAAGACGCCGTAGCGCAGACTGTGGTCGATTACTTGCTGAAGCACTGCCCGTTAGAATCCGGGGTAATGATCTTCATGTCACTACCGAAGGCCCCAGGCTATCAAATTTTTACCATTGGTACCCCCCGAAAACCCCAAATCAACATCAGTGGCCTACAGTTAATTGTGGAAACCCTGATTTCATCATAAGCACAACGTCTGGTATGTCGGATGTTTTTCGTTCACTATATCTTGGT # Right flank : CGATATCAATTTAGTGCCACCGATTAGTCGCTTTGAGTGGCTCACATTTTTAAAGCCTCCGGCTTTGCCGGGGGATACTTACTCGTCACTATGCGGCGCAAAAGGTGACGGTCGGGCGAACCTATGTGACGGAGATCTTGAAACGGCATTGGCTGGACCTGTTACGGTTACGGCGTCACCTCAAGCATCGGCGACCACCGGATATCCCGTTGAATCAAGTCTGGGGAGTGGATTTAACCGGCAAGACCAATGACACAAGGCAATTACATCCGATTTTGGCGGTGGTCGAGCATGGTAGCCGGGTGGCCTTGTGCCTGGCGGCGTTACTGAACAAAGCGGCGTGGACGCTGGTCGGCTATTTGTGCCTGACTATCGGGCGCTTCGGTAAGCCACGGTTTGTTCGCTCGGACAACGAAGCGACGTTCACTGGCAAAGTCATGCGCCAATTTCTGCAAATGGCACATATTGGTCACCAGCGTATCCCTCTGGTCAGCCATGGT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTTCCCCACGCCCGTGGGGGTGTTTC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,1] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCTTCCCCACGCCCGTGGGGGTGTTTC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-10.80,-11.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [56.7-61.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,4.87 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 16138-18299 **** Predicted by CRISPRDetect 2.4 *** >NZ_SCOH01000019.1 Chitinivorax sp. B NODE_19_length_101823_cov_11.494878, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 16138 28 100.0 33 ............................ CGCCAAGCTGGCGTTGCTCGGGCTGCTCGTGCT 16199 28 100.0 33 ............................ TACGTACGCAGTATTTGCAGACCGTCTGGTACA 16260 28 100.0 33 ............................ CTCCTTGCATCAAATAGCGGCCATTCCGTTTCT 16321 28 100.0 33 ............................ CTCACACTCAGCACCCACCACTGAGTAAGCCGG 16382 28 100.0 33 ............................ GTGCGCAAAACAGACTTCCAATACTGGCATGGA 16443 28 100.0 33 ............................ CTAAATCGTCGAAAACACCGTCCGCGTGTCTTG 16504 28 100.0 33 ............................ TGTCACGACGGCGCCACCAGACGGCAGTGCCGT 16565 28 100.0 33 ............................ TATGTAGGCGACAGGGTAGCGTCGTTCAAGGCA 16626 28 100.0 33 ............................ CTGTGCTTTCTGCTCTAGCAAAGCCAGCCGCTC 16687 28 100.0 33 ............................ TGTGATGCTGACATTACCGCCAGCGCCGATTGT 16748 28 100.0 33 ............................ TTCACTTCATCGCAGCACAACACTGATAAGGAA 16809 28 100.0 33 ............................ CACGTGGGCTACCGAGACCGGGAAGCCAACAAT 16870 28 100.0 33 ............................ CAAATAATGGCCGAGCCTATCGAGTGGGCCCCG 16931 28 100.0 33 ............................ TGCAGCATGATGGCTACGGGCTTTATGCGGTCT 16992 28 100.0 33 ............................ TACCTAAGGTACGCCGCTGGGAAGCTTGGGGTT 17053 28 100.0 33 ............................ CAAACTCGGGTGGTACTGACGCCGCGTTACGTG 17114 28 100.0 33 ............................ CCCTTTCTTGTCGTACTTCCTAACCTGAGTACC 17175 28 100.0 33 ............................ TGTTCGGATGTTTCTCACATAAATCTGATCCAT 17236 28 100.0 33 ............................ CGTCTCTATCGCTTACGATATCGCCACTTGGAC 17297 28 100.0 33 ............................ CGTAACCGTTCGTGGGTCAGCGAGACAGGCTGC 17358 28 100.0 33 ............................ CACTACGCCCGACGGGCGGCACTAAAGCGCGCA 17419 28 100.0 33 ............................ TCACCACATCATCAGAGTTAAGCCGATTACGAA 17480 28 100.0 33 ............................ CATCGTACTGGGTGGGGCTCAAGCTCAAGTCGG 17541 28 100.0 33 ............................ CGCGCCGTCCATACCGAGCTCGTTACGAGATAC 17602 28 100.0 33 ............................ TGGCGGCTCATACCAGACGATTACAGCCAGCCC 17663 28 100.0 33 ............................ CGAAATTGGTAGCCATCGTGCCATGTTGTACTG 17724 28 100.0 33 ............................ TACGGATGCTCATAGCGCACGTCGGTGCCTACT 17785 28 100.0 33 ............................ CGCAGTCGTAGTCGACTCGCCAACGGACGGGTC 17846 28 100.0 33 ............................ CCCTATGCGGCGTAACGTCTCTATCGCTTACGA 17907 28 100.0 32 ............................ GTTGTTGCGTGCCAAGGGCTGGCTAACATAGT 17967 28 100.0 33 ............................ TGACGCGAAGCCCCTGATCGATAAGATAGTCGC 18028 28 100.0 33 ............................ TCACAGCGAATGGCTGCAAGAAATGCCACATCA 18089 28 100.0 33 ............................ CAGAGGCGAGTACACCCGGCAACTTACCGTGAG 18150 28 96.4 33 ............T............... CCTCGTGACGGCTATCAGTAACGCGAGTACGGC 18211 28 100.0 33 ............................ CTTAGCGTAGGCTGTCGAAGCTGTAGCGAAGTC 18272 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================= ================== 36 28 99.9 33 GTCTTCCCCACGCCCGTGGGGGTGTTTC # Left flank : ACTTGCTATCCGTCACATTTCCCTTACTTGCAACCTACACATATTCCAATTTTTACCCCGAAACCTTGTAACCGTGGAAGTCAAGTTACTGCCATTTCATTACCTTTGTTTTTAAAGGAATAAAAGTAAAATAGAAGGGAGGTGGCAAGGCAAAGGCTTCCACGGTTAAAAATGGCAAGTCATGAAGAAGTGGGGACAAACCGTAGAATTTCACACCCAAGCCGTGAAATTGTTATGATAAAAAATCAATAAGTTAGATTGGCTTCCACGCTTTCCCACGGTTTTTTCTACTTGCTCAATCACGGTACTTTTGCCGGGCTTGGCTGACCTGACGCAAAATTGGCTTTACGTTGTCATAATTTGGGGGTTTTGGCTTCGATTGATTCGGTCGCTTATACGTGGCTGACCAACAAAGGGCTTTAGTAGATTGCAGATACCCTGATATCCTCAAAACCTACTACATATAGGTAATTCATGTTTTGAGATTGCCAAATGTTGGT # Right flank : CGTAGCCGGAGGTGAGTGCGAAGTTGCATCCAACTACACACTAAGTTTGTATGATGCTTGGACACCGATTTAATCGAGGCACAGATTTCTACTGATTTCGCCATGTAAAATTAATTGTTTATTTGGGGGTATATAAATGGGTATCCAACCCAGAAGCCACAAACAAAAATAAATTAAAACAAAAACATAAAATCAATTAAACCCATCAATCCTTGATAGCCAGCTCCAGTCCTTCCTTCACTTCCTCCATCACCACATAGCTGCGTGACTCGGTCGCGCCGGGCAAGCGCAACAAGATATCGCCCAGCAATTTGCGATACAGCGACATATCGGCAATACGGGCCTTGATGAGGTAGTCAAAGTCACCAGAAACCAGATGACACTCCATGATCTCAGGTAGTTTGAGCACCTCACGCCGGAAAGCCTCGAAGATTTCGTCCGACTTGCTGGATAGGCGCAGCTCGACAAACACCAACAAGGAGGCCCCCATTGATATCGGG # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTTCCCCACGCCCGTGGGGGTGTTTC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [1,8] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCTTCCCCACGCCCGTGGGGGTGTTTC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-11.50,-10.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [66.7-51.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //