Array 1 86897-84427 **** Predicted by CRISPRDetect 2.4 *** >NZ_JABAQB010000009.1 Arcanobacterium phocae strain APH81 NODE_9_length_102210_cov_59.238208, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================== ================== 86896 29 100.0 32 ............................. GAAGAAGTATTCATCACTTCAATCAGCGCAGA 86835 29 100.0 32 ............................. GATCATTTCCACTAGCTCAAATGCGAATCTAC 86774 29 100.0 32 ............................. ACTGCTGATTCGGTAATCGGAGCCATGATTAC 86713 29 100.0 32 ............................. ACTTAGCTACTCCGGTTCCTGTAGGATCGCCT 86652 29 100.0 32 ............................. CTGACAGCAGACCCAGAGTTACGTTATGTAGG 86591 29 100.0 32 ............................. ATTCTGCAAGTGCCCTAGCGCGTTCGTTAGTT 86530 29 100.0 32 ............................. ATCATTGCGGGTGGAAGCCCGTGCCAAGATCT 86469 29 100.0 32 ............................. TTCAAGTTTTCCGGGGATTTCTACCGTATTAG 86408 29 100.0 31 ............................. GTCGTATGCGAAGGATAGCTGGGATAGGCGT 86348 29 100.0 32 ............................. GATCTTGTCGGAAATGAAATGAGCGCCGCCGA 86287 29 100.0 32 ............................. ACCTGTTGGAACTGTGGTCCCGGAGGGGACGC 86226 29 100.0 32 ............................. ATGAAAGACCTAGCCCGGCTTATCAACTATCA 86165 29 100.0 32 ............................. TTGTTACCAGGCGCCAAAGCATGATCAGCATC 86104 29 100.0 32 ............................. GAAAGGTCGAGTGCCGGTTTTTAAAACCAACC 86043 29 100.0 32 ............................. ATATCCCCGTCCTGAAATACCTGGCGCGGCTT 85982 29 100.0 32 ............................. ATAATTTCTTCTCACCGACCGCATGCCCCGGA 85921 29 100.0 32 ............................. TCGTCAGGGAATTATGGAGAAGCTACGCAAGG 85860 29 100.0 32 ............................. AATTCTCGGCTAAAGCTATGCACGGCGTTCTC 85799 29 96.6 32 ............................T CCGCGACCGTGTGGGTCCCAAAGCCATACGGG 85738 29 100.0 32 ............................. GAATGGAAGTTCCATAGAGTGCCTTCGCCACT 85677 29 96.6 32 ............................T TATGCCGGCCGGCGTCGCCTTCTATCTAGCAG 85616 29 100.0 32 ............................. GCTGATCCCTACAGCGACGAAACACTCGCTTT 85555 29 100.0 32 ............................. TTCATCGTTGAGAGTTCCCCAACCAACTTGCG 85494 29 100.0 32 ............................. GTCGCCGCAAGATGCATTACGTGCAACAGCGA 85433 29 96.6 32 ............................A AATCGATTTTAACCGGCGGGATCACAAGACCG 85372 29 100.0 32 ............................. TCACGGATCAGCGTCGGAGCCTCATCTTGTAA 85311 29 100.0 32 ............................. TTCCAGTCGGGGTTAGCTAGGAATGATTCAAG 85250 29 100.0 32 ............................. AGGGAAGATGCAGACTGCGCAAGGCGCGCAAA 85189 29 100.0 32 ............................. TGAAGACCAGGCACGCACTTGGAAGAAGCAAG 85128 29 100.0 32 ............................. GTAGCGACGTGTGCGCAAGACGCAGTGAACCT 85067 29 96.6 34 ............................A CGGTTTGTCCTTTCGGCACGCTGATAGTGAATGG 85004 29 100.0 32 ............................. ATCGAAAATCTGGCTAGACTCCTTACCACCGG 84943 29 100.0 32 ............................. GAACTCTGGCATTTTATGTTCGTCTAATTGTG 84882 29 96.6 32 ..................A.......... ATCACAACCTTACAACTACCGGCAACTGACGG 84821 29 100.0 32 ............................. GATAGTCGCCACCCTGACATTGGGCAGCGAAA 84760 29 100.0 32 ............................. GCTAGCTAGGAGAGTTCCTTTCGTTAATGGTT 84699 29 100.0 32 ............................. AAAAAAGACCACCAAACGGTGGCCTCAGTCTT 84638 29 100.0 32 ............................. TTCGGCGACTACCCCGCCGAGGGATGGGCGCT 84577 29 100.0 32 ............................. ATCCGGCGCGTTTACGGCAATATTCCATTACG 84516 29 100.0 32 ............................. AAGGTGATTTTGAAACCGGCTGGAAAGCTTGT 84455 29 96.6 0 ........................C.... | ========== ====== ====== ====== ============================= ================================== ================== 41 29 99.5 32 CTCTTCCCCGCACACGCGGGGGTATTTCC # Left flank : TAGACGCGATTTACGGAGGCAAATTCATAGCAAGCATATATTGGAAGACATGCTTGGCACGCTCATGGAGATCTTAGAACCACACCTGCCGAATCGTGATGATGATCGATTGATCAATGATAATGGTGAAGTTTCTGGGCACGTACAATACGGAAAAGATGATGAGTGATGTTTGCAGTCTTAACAATATCTGCAGTTCCCGAGCATCTTCATGGCTATGTAACCCGATTTCTCACTGAGGTTGAAAGTGGGGTTTACGTCGGAAATATTTCTCGGAACGTGCGTGAACGCCTATGGGAACGTGTGAGTAGTACGCTTGACGAAGGAACTTCTACTATGATTTATAGCGACCCGCGACAAGAACAAGGATTCTCGATGCTCACTGCAGGAAAAAATTCACGAAAAGTATTGGACTTAGACGGTCTAACCGTTGTGTCCATGCGTCCTGGACGTGGAGAATCCAAAATTCGAGATCGTTGAAAATAAAGGGTTTCGTTAGT # Right flank : AAAATTTGAAGGCGATTCAAAGATGGGCGCTCAAGTGATCGGAACGATCATGATCAAGGTAGCGCTTCTTATTGTCGCTATTCAAAATGTAGATCTAATTCTTAAAGCTATTAACGAAGCTGGCGAAACACTTATTAACGGGCTGAAAAAGTATGCAACAGTCATACAGGCTAACCCTGTCAATATCGGTGATCTTGATATGGATACTCTAGATATGATCGGCGCAATGATCATTCTATTCTTGCCCTGGCTGATTTCAATGCTTGGCGGCATCGTCGTAAAAATCGTTGTACTCTTGCGATTTGCTGAGATATACATACTTTCTGCTGGGGCAACTCTACCGTTAGCATTCTTGGGTCATACCGACACAAAATAAATTTCGATCGGATACCTCAAGAAGTATGCAACGGCCATGCTTCACGGTTTCACGATCATCCTTGTCCTGATCATCTTTGCCAAATTCCAAGGAGCCGGTACAGACCTAGGAGAAAACCCAACAG # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTCTTCCCCGCACACGCGGGGGTATTTCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [7,3] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-12.30,-13.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [56.7-56.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,0.78 Confidence: MEDIUM] # Array family : NA //