Array 1 9245-9456 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAAOMH010000048.1 Acidithiobacillus albertensis strain No26 Contig48, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 9245 29 100.0 32 ............................. ACACGCCTAGCGCGACCGAAGTGCAGTCTGCT 9306 29 100.0 32 ............................. TGTGCACGTTGATCTGGCGAGCTGTTGGCTGG 9367 29 100.0 32 ............................. CGGGACAATGGCGTAAACGTGATGGGATTTTC 9428 29 75.9 0 ..C.A..................TC.CCT | ========== ====== ====== ====== ============================= ================================ ================== 4 29 94.0 32 GTTTGCCCCGTGTATGCGGGGATGAAAGG # Left flank : GGATGCCGACCGAGGACGAGGCGCTGGAGAAGTGGACCCGCGCAGTGACGGCAGGTGGTTTCCAGGTGGAGCATACCCGCATGGTGGAATCTGCCATGTCGTTCTATCACCGGCGGTTGGACAGCCATACGAGGCTGCCGTTTTGGTTGGTAACCAGCGCTTTGACGGTGGTGGATGCGGAAAAAGCAGCGGAAACCATGGTCAGAGGGGTTGGCCGGAGTCGGGGGTTGGGGTTTGGGATGTTGATGGTAACGGGGTGAGGCGAACGTTCCCCATTAGATTTGGTCGTCGCCAATAATGATTATATTGGTCTAAATTTATCAAGACCATGTGAAAACCCTCGCTATTCATGGCGAGTGGGAATGCGAATAAGGACGACTTTATTGATCAGAGTATTCCGAGCGATTAACGGCCATGCGCAAAATCTGTCTCAGAATTAAAAAATCGGTGGCTTTTGATAGCCGTAAAAATCCGTTGTGAAACGGTATGTTGGAAGAAGG # Right flank : TCACTATTTTTTTGAATGATCGCAGTAGGTATTGAGGAAGTCACTCACCACTTACATTCAAAGGAAAACGCCATGTCACAAGAGGTCATCACTCGTACCCCATCCACAGAGGCCGACGTATCTTATCGCAATGGCAACCGACCTTCTGAGCAGTATGCCCGTATCAGCCTGACCTTGCCGGAGATGGCGCGGCGGGTGAGCACCCAGGCCGATCTTGATCTTTTGAAAGCCAGGATTAACCAGATACCTGGGCATGACCAGATTCGTCGGTCTGGTGCCTACCATCGGGCGATGGCAATTGCACAAACGCGGATCCGAACGGCAAGCCTTTTCGGTTTTGATAAAGTCGGCGGCATCAAAGCGCTGGCTTATGGTTCTGGTATGGCGCTGTATTTTGATCGCCGTTTTGGGTTTTTCTTTTGCGAACCGAATCTGTATACGATGGGTGACGATAACTTTTCTGTGACCATCGCCATATCGACGTTCATCCTGTTCGCGCC # Questionable array : NO Score: 2.56 # Score Detail : 1:0, 2:0, 3:0, 4:0.70, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTGCCCCGTGTATGCGGGGATGAAAGG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,7] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-10.60,-8.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-7] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [58.3-63.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0.37 Confidence: MEDIUM] # Array family : NA // Array 2 10627-10960 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAAOMH010000048.1 Acidithiobacillus albertensis strain No26 Contig48, whole genome shotgun sequence Array_Orientation: Unconfirmed Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 10627 29 100.0 32 ............................. GGGGCGGTTGCAATCTGCTCCGGTGTCAGTTT 10688 29 100.0 32 ............................. TAACCGTCGCACGTCGCGGCAATGCGGCTGGG 10749 29 100.0 32 ............................. TATGGATGAAAAGACTGCATGACGGCATCAAG 10810 29 100.0 32 ............................. GCCACACGGAGAGAGGGTATCCCTTGGGTCAC 10871 29 100.0 32 ............................. TACCTGGAACAATAAAGAGCATCAGCAATCAG 10932 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================ ================== 6 29 100.0 34 GTCTGCCCCGTGTATGCGGGGATGAAAGG # Left flank : GGACCACGAGATGGGGACCGATGAGAACGGGGATGTCGCGATGCGATATCAAGATGAATTTTATACCTGGTATGGAGCTTTTCGTGATCGTCGTGACCAATGGTCTTTTTCGGTCTGGGAAAAGGAGGAATTACTCTCCTGGAGCGTTCATGAATTCATCGATAACATTTCTGAAGGCCCTATAAAAAGACAATATGCTGGATTCCTGAAAGATATTCAGTACCTGCAGCGCGACCTGTTTTTGTCTCACGATCAGGACACTGAATCAAGAACGCATCATTGAACACGTATTCGTTGATGGGTGGTGAGCAGAAAGCCGCCATCATTACGGCGAAGAATAACGAGATTGGATTTGACATAGAGTTGATCAATCACGATAATCATACGGTGGAAGATTTTGACGGTTTAATGCTAATCAGCACAAAACGTCGCCGAATTAAAAAATCGGTGACTTCCGAAGGTGGTTAAAACCTGTTGTGAAATAGCAGGTTAGAAGAAGT # Right flank : GTTCCTTTCCGTGGGGCCACTGATAGTCCATTGTCATTTTTTTATAATACCGCTATCATAGCCAACATGTTTTATGTTGCGGGAAAGGGGCCGGCGAAGCCTTCTACCCCTGGGCTGCCTCGGGTTTTCCTGCGCAATCGAGGGACGTCAAAGGAGTGGCTTTCAATGAAAAACCGGGACAAAGTAGAAGCTTTCAAGTCGTTATTGATAACCATGGCAAGGCTTAATGCCCCTCTAACTGGGGGTAGCATTTTTGCCATCAATGGAAAAACGATGATAACCAGCCTGATGATGGGGCTTGGTGATTTGTGTGATCTGAATAAAGTGTCGTTAACATGGGCCACGGTGATGGAATACATCCATCCTGACAAGTTTGTCGAGTTAGCTGGTCGCGCGGATATTTCTATGAAGGCTCGCGAAGCCATGCAATCCTTTTTGATGTCCACGGGCTGGAAAGAAGGCGTATCCGATCACAGCAAGTGGGGCGATTTCGACCGGCA # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTGCCCCGTGTATGCGGGGATGAAAGG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,6] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-10.60,-8.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [60.0-60.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: NA [0.37,0.37 Confidence: NA] # Array family : NA // Array 3 14582-15221 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAAOMH010000048.1 Acidithiobacillus albertensis strain No26 Contig48, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 14582 29 100.0 32 ............................. GGAGCAAGGATCCTGGCCGCATGTGCAACAGC 14643 29 100.0 32 ............................. GCAGGCGTCAAGCATGATAATGACGTAGGGTG 14704 29 100.0 32 ............................. TAGTGATCCGCTTGTTTATGGTCGGCCGTGAA 14765 29 100.0 32 ............................. GATAAGCTGGATTTAACAGCAGAAGCAGCAAC 14826 29 100.0 32 ............................. GAGAAGCATTGAATGCCCGTCTGTGGCTGGCC 14887 29 100.0 32 ............................. ACTGGATGGACGGCACCAGCGCCGAGGCCGTG 14948 29 100.0 32 ............................. TATAAGGATGCCGCAACATGGTTCAATGTGCA 15009 29 96.6 32 ............................T ACAGGCGGTGCAGGATGAAGCCGCGCGGCTGG 15070 29 100.0 32 ............................. TTGGCTGGTGGAGATGAAAGACTGATCGCAGC 15131 29 100.0 32 ............................. ACCCGCTGTGGTAAGCCGTGGTGGGAATCAGC 15192 29 96.6 0 .......T..................... | T [15219] ========== ====== ====== ====== ============================= ================================ ================== 11 29 99.4 32 GGTTGCCCCGTGTATGCGGGGATGAAAGG # Left flank : CGCCGTCTTGCGGGATGCCGGCCCTTGGGGTTCAGGGTTTGCCGAACCGGTCTTTGAGGGCGTCTTTCGCGTGGTAGAGTCTACCGTGATGAAAGGCGGGCATTGGCGGCTGCAGTTGTCTCCCCAGTCCGGTAAGGCGTTTCTGGAGGAGGTTACGGTAACGGCTGTACGTTTTCTGCGGGATACTCAGGGAGTCGAGGTAGTCATTCCTGCAGAGAACGACGTACTGGCTATCCGGTACACCCTGCAAGTGAATCGTTGGAGAGATCGGGACGGTTTGCAGATGCTGATTCAGAGCGTAGATTTATTGACAGTTAATGATTGATTAAAAAGCGAAAAGTGCAACACGATTTGACAGGGTGGTCATTCAGCATGAATAATAGTCTTGCGGTTAATCTCGATGGTTTAACGATCAACAGCGCAAAACGTCGCCGAATTAAAAAATCGGTGACTTCTGAAGGTGGTAAAAACCTGTTGTAAAACGGCATATTGGAAGAAGG # Right flank : GCGGTGCACCATGCCGCCAATCACACCAAACGATGACGACCTTGCCGGCTGTCTTGCGTTAGGTGCTCGTCTACATCCTCTAAAGCTGCTGCTTCATTAGGTAGCGCGTCTTCTTTTGCTTCTTGCACAAAAGAATCTTCCTGCAGCATGTTCACCGAACGCTCTATGACTTCCCGCAAGTGCTGTAGTTCTGTGACATCCGGATATTTTGCCTGCAAGTCCTCCAGCAAACCGTTCGAGTTGCGTAAAGCGTCCAGCGTGTCCGTGAACACGCGCGTAACCGCTTCATCATCCAGGTGGCAGAAAGTCTTCCCGAAATCTCGCAGCGCAGCGGCGTCTGGCCATTCACGCAAGCCATTCATCGGTAATGCTGGCTGATCATGAGGTATCCAGGCGGTTGTGCAGACAATGTCGTAAGCGGGGGCTAACATCCGCTCTTTCGTCGGATCCTCGTACAGTAGCCCGAAGTTTTTCAAGTGTGCGTCGCCATTCCGCAGCGC # Questionable array : NO Score: 3.23 # Score Detail : 1:0, 2:0, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GGTTGCCCCGTGTATGCGGGGATGAAAGG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,6] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-10.60,-8.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [60.0-40.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [1.05,0.37 Confidence: MEDIUM] # Array family : NA //