Array 1 185273-186641 **** Predicted by CRISPRDetect 2.4 *** >NZ_SPQQ01000003.1 Desulfosporosinus fructosivorans strain 63.6F NODE_3_length_827037_cov_37.717503, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ====================================== ================== 185273 32 100.0 34 ................................ GATAATGCCCTGGCCTTTTCCTCATCGGTAAATA 185339 32 100.0 36 ................................ ATAAGGATGAAATTTATTGCGCTTTTTGTTGACGCC 185407 32 100.0 36 ................................ AAAAAGATATTGTTAGAGATCATATTATTGTCGCAA 185475 32 100.0 35 ................................ CTTAAATCCTTGCGCTATATCCGTTTTCCAATCTT 185542 32 100.0 34 ................................ ATTTAAGGATTTGACTTGTTTTCGTTGCGCTTCT 185608 32 100.0 34 ................................ ATCTCGTTCCTCTGCTTGAGAGTATGCTATTGCC 185674 32 100.0 35 ................................ TACTGCTATAACGAGGACTCAACCCCTACAACTAG 185741 32 100.0 38 ................................ ATTCTCTAAGGCTATTTCCAAGGCTTCGTTGTGGCTAT 185811 32 100.0 36 ................................ TGAAATCTTTTGTTTCGTTTCCTCGGAATGTTTAAC 185879 32 100.0 34 ................................ AAGATACAGAACTCCTTGCGCGCTTTGGAGATAT 185945 32 100.0 34 ................................ CGTCTGGTTTAATTAGATCGCCATAGCCAACCTT 186011 32 100.0 35 ................................ ATTGTCAATATCTGCGTAAGTTCAAGCGCATCGTT 186078 32 100.0 35 ................................ TATAACCCAAACGGAAAGCCAAAGTGTGCACACCA 186145 32 100.0 35 ................................ CAATACAGGAGCCACAGCGGTGGTTATGCCAGTCC 186212 32 100.0 35 ................................ TCCGATTTCCATCGGCTGCCACACATCCTTATTTC 186279 32 100.0 34 ................................ CCCTGTCCCTTTCCGATGAGTTGCATAACCTCCC 186345 32 100.0 35 ................................ ATGGCCGCTCCACCCTCTCGAACTCAATGACCCAT 186412 32 100.0 35 ................................ TCCGCTTCATCATCTTTTCGTAGTGCTTTGACTTT 186479 32 100.0 33 ................................ GATTCTGGAACCTCAGCAATCCACTTACCGTCG 186544 32 96.9 34 ...................T............ TTCTTTAAATATTGCTGTTATGGGAACGCTCATC 186610 32 78.1 0 C.....C.TGGT.T.................. | ========== ====== ====== ====== ================================ ====================================== ================== 21 32 98.8 35 GTCGCTTCCCACAGGGAAGCGTGGATTGAAAT # Left flank : GTTCTCAAATCAACAATTATTGTAATAACAGTATAAGCAGATTGGACATTGATGTTCTGGCCCGGATATGTACAGTGCTTGATTGTGACATTAGCGATCTGCTGGAATTTGTACCGCCGGAGAAATAACTTCGATTCGCAAGTGGCGATAATCGGGGGATATAAGGGGACGCTTCATTCTATAGAACGAAAAACATAAAACAGAATGCTGATTTGCAGAAAACGGATGGAGCAGCTTTCCTTGAAAAAAACTACTAAGGAACAAGGTTTTGCAAGCATTTATGGCGAAGATACATACAAGGAAACGAGGATACAATCATTATTTAGTGCTAGTGCGAATGTGTAGTGAACATAGAATTGCCGGGGGATTCGCACCGCGAAATGATAAAGATTTTGTTGAAATATGGTAGAATATTGGATTTGCGATTGTAGTTTGTGATGAAAAGTTTGAGAAATTAAACAGAAATCTTTAGTGAAGTGGTTTATTTATTATTTTTTGCT # Right flank : TTAAAAACGGGCTGCCTGTTCGGACCATTTCAGCTCCAATGCCATTGAAGGTAATACTCTTACCTTGCAGGAAACAGCCTTGGTTCTTAATGAAGGTATTACAATCGCTGAAAAACTGCTTAAGGATCACATTGAGGTTATTGGGCACAAAGATGCTTATTTCTGCGTAGAAGAATTGCTGAAAGAGAAAATTCTACTCTGAAAAGATCATTATGGATATTCATAGAATCGTGCTGATGGACAAGGGCGTTTATTGCTTTGTACCTGTTCGCATTATAAGTGCAGTTCACACCCGCCACAGCTTTGGGAAATACCGATTCAGATGGAACAGCATCTTGCTGACTACGATAAGGTGAAACATGAGTTACATCCCATTGAACGTGTGGCTCTCTTTCATCTTAGGTTCATGCGGCATTTGCAGAGTAGTAGAAAGTTTCAAAGCGAATATGCAGGAATTAACTCGAAGCTTAGAGAAGTTTACGAAGTCAATGAATTTGACC # Questionable array : NO Score: 9.20 # Score Detail : 1:0, 2:3, 3:3, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCTTCCCACAGGGAAGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: F [8,7] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-5.10,-6.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [78.3-55.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : NA // Array 2 195871-196966 **** Predicted by CRISPRDetect 2.4 *** >NZ_SPQQ01000003.1 Desulfosporosinus fructosivorans strain 63.6F NODE_3_length_827037_cov_37.717503, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ===================================== ================== 195871 32 100.0 35 ................................ TTTTAGCATTTCTAAATAAGTTGGCTTTACTGCCC 195938 32 100.0 34 ................................ GGTTGTATCCATGGCTTGTTGCATCAGGACCTCC 196004 32 100.0 35 ................................ GTGCAATCATTCCATGCTAGACAAGTATCATTGCA 196071 32 100.0 35 ................................ ATCCCTGGTCCATCCTAGGTCAGCTTTCTCTTGCA 196138 32 100.0 36 ................................ CATAAAGAAGGATTTGCCTGAGTTACGTCCACCAAC 196206 32 100.0 33 ................................ TCACCTGCTATGTCCACGCCTTGACCGTACCAA 196271 32 100.0 34 ................................ TGAAATCTTTTGTTTCGTTTCCTCGGAATGTTTA 196337 32 100.0 34 ................................ TTAATCAGCGTTACCTATACGGAAAACGAAATCG 196403 32 100.0 35 ................................ TTTAAACTCGCTTGCTTACTCGGAGGTAACAACGT 196470 32 100.0 35 ................................ TTATATACGTCGTTTAATTAACAGAACATAGCCAA 196537 32 100.0 35 ................................ CCATCAAACAGTAAGGGTGGTCGCCCAAAGAAAGG 196604 32 100.0 33 ................................ TGCTGTGCTGTGCGACCTTCCGTGAGTGGATTT 196669 32 100.0 34 ................................ CGTAGCAGGCGCGGCAATAACTTTCGCAAGTAAC 196735 32 100.0 37 ................................ TTGTGCTTGTACATATGTTGGCGCAATCAAAACAAAG 196804 32 100.0 33 ................................ CTTGAGCCTTTCGTGCTCCCGATGTTCCCGGAA 196869 32 100.0 35 ................................ AGAATCCTTGTCTATCAAGGTAATCGCACCATAAG 196936 31 96.9 0 ......................-......... | ========== ====== ====== ====== ================================ ===================================== ================== 17 32 99.8 35 GTCGCTCCCGGTATGGGAGCGTGGATTGAAAT # Left flank : TGGACGGGTACCCGGCCTTTATGTGGAAGTAGGTGAGAAGATATTTTAGTGCTTATCACATATGATGTAAATACTCAAACGGCGGCGGGGAGAAAGCGACTGCGTCAAATTGCTAGGCAATGTGTGAATTATGGACAGCGTGTTCAGAATTCGGTTTTTGAATGTGTGTTGGATGCGGCCAAATTCCGTGAGGTACAGCATAAGCTGGAGCAAATTATTGATAAGGATACGGATAGCCTGAGGTTTTATTTGTTGGGCAATAATTACAAGAATAAGGTTGAGCATGTGGGGGCCAAAGCTTCCTTTGATGTTGAGGATACGCTGATCATTTAGTGCGAATGTGAAGCGAACATAAAATCCCTGGGGGATTCGCACCGCGAGATGACAGGAATTTTGATGAAAAATGACGATAATATTGGATTTGTAAGGCGGTTCGTGGAAAGAATGCATGAATTTTAATAAAAACCTTTGATAGGAGATAGTTTTATTAGTTTTTTGCG # Right flank : TTATATCTATGCACAGGACCAGTATATTGAAATTTACGATAACAATCAGAAAAACTATCAGATTACCGTTGCCACTCAGATGGTCTGAGGCAAATTGTTATCAGGGGAGCTATGCGCCTTATTGTCCGCCAGGGAATCAAGCTTAATTACCGCAGATGGATTGTCTCCGGCAATGAAGTGGCAGGTGCAAAATGGTTAACAAAGAAAGTGATTAATAACTGCAGCACTCTGGGGCGGTCTCCGGTCGCTTCTAAGTTTTTAACTTTTTTGGCAATGGATATACAATTGGTTCTACATGGAGATTGAAATTTTTGAGGCAGGAAAAAGAAGCTAATGATGGAACTAATTAGGAGAAGAATATGCAAATAAGCAGGAAAGAAGGTCTTTCAGTTGAGGAGAATAATGCCCTTTTTATCCACCTGCGGATTATTACCGCAACGAGTTGGCCCCCTAGACGAGGAAATTTGTTCACTGCTTGCCAAGCGTAAGGAGCTGTCAGA # Questionable array : NO Score: 9.25 # Score Detail : 1:0, 2:3, 3:3, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCTCCCGGTATGGGAGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: R [6,8] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-5.10,-5.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [75.0-70.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0.37 Confidence: HIGH] # Array family : NA //