Array 1 28117-27350 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_MJJY01000003.1 Campylobacter lanienae strain RM10695 RM10695contig00003, whole genome shotgun sequence		Array_Orientation: Reverse

  Position	Repeat	   %id	Spacer	Repeat_Sequence                      	Spacer_Sequence                        	Insertion/Deletion
==========	======	======	======	=====================================	=======================================	==================
     28116	    37	 100.0	    35	.....................................	TTTAGTAGTGAATTTTTAAACAAAGATTTAGTTAA    	
     28044	    37	 100.0	    37	.....................................	TTTAGCACGGCGGAATTTTTAGCATTTTCTCAAGCGG  	
     27970	    37	 100.0	    35	.....................................	GAAATTTAACGCTTCACGGCTAAGAGCATATTTAA    	
     27898	    37	 100.0	    35	.....................................	TTTAAAACCTTATATCATAGGTTGGGCGGTTGCTT    	
     27826	    37	 100.0	    35	.....................................	TTATCTTTATTCAATAATATTTGACCAACTTGGTC    	
     27754	    37	 100.0	    36	.....................................	TCGCTCGGCATTTGATATTCACTTATATAAATTTTA   	
     27681	    37	 100.0	    36	.....................................	AATTCTCCGCCCTTATTGTTGGCTTAAGAATGTTAT   	
     27608	    37	 100.0	    39	.....................................	CGATAAAGATGGCAAAGCAAGATATGCTATAGAAAAAGA	
     27532	    37	 100.0	    35	.....................................	TAAATTATCTAAATATGCTTTTGGGTTTAACCAAA    	
     27460	    37	 100.0	    37	.....................................	AGTTCAAGAAATAAATTTACCGTCTTGGACTTATTAT  	
     27386	    37	 100.0	     0	.....................................	|                                      	
==========	======	======	======	=====================================	=======================================	==================
        11	    37	 100.0	    36	GTTTCAAACCAAGTTGGATTGTGGTATAATTTGCAAC	                                       	       

# Left flank :   GCTTCTGTAAGCGTAGCACATCCATTAAAAATCCAACTACTAAAACACCAATCACTAAACTTTTTTTCATTTTTCTTCCTTTGTTTAAAGTTCAACTATTTTAATAAATTTTTGGTAAATAATTATTTATAAATCTAAAATTTTTTAAATTGTTGATATTTTTAAATAATTCTATTATTTATAGCTTGAGTTAATATTTCCATTTTACTCTCCTAAAAATTGTTTAAAAACTTCTCTACATTATCACGCTCAAAATATTTATAATATTGTGTAGAGATACGCATTAAAATCATCTCTCTCTTAAACTTATCAGCTCGAGCTCATCACTTTGATAAATTTTATATAACGAAGCATTTACTAAATCTATATCATCAAAATTAGCCGCTATACCTAATTCTGGGGCAATTTCATCATAAAATAGCTCTATTTACTCCCCTTTTGTAAGCACAATTCTAAAAGCATTTATAAAGTCTTGAGTGTTTGTAAAATTTTGTATTTGT
# Right flank :  TCCGCACAAAATGCCCTGTTTTAGGGATTTTGTGCGGAGTTAATTGTAAAATTTTTTCCACTTAGAAAAAAATCGCAAAAAGTGGCGAATTTGTGGAAAAATATGTTATAATCCAAGCGCAAATTATACCATAATCTAGCTTATAGCGTTTGAAATCACCACAAGGTGTTTTCATATCGGGGCAACTGCCTTTGGCACCCCCGGTTATTCTCTATCATCACAATAATTTTTAAACTCACATTGCGCACAAGCTGTAATGCTAGCTGAGCTTTGGGGGAAATATCCTTTTTCTAATAGATCTTGAATTTGCGTTAGTGTTTTATCAAAATAAGCTAAATCCTCTTTATAAATTTCAAAGATTTTAAATTTTAGATTATTTGAGTAGCATAAAATCACCCTATGAAAAGGCTTTTTAAAATGTTTGCTAGCAAGTTTAGAGTATGCTATAAGCTGCATTTTTGCGCCCTTGCTTAAAATTGGCTTTGATTGATTTTTAAACT

# Questionable array : NO	 Score: 3.26
# 	Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTTTCAAACCAAGTTGGATTGTGGTATAATTTGCAAC
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:64.86%AT]
# 	Reference repeat match prediction:         NA 
# 	Secondary Structural analysis prediction:  R [-1.30,-1.90] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      NA [0-0] Score: 0/0.41
# 	AT richness analysis in flanks prediction: R [63.3-75.0]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         R [0,0.64   Confidence: HIGH] 

# Array family : NA
//