Array 1 57461-57617 **** Predicted by CRISPRDetect 2.4 *** >NZ_LLZH01000286.1 Actinoplanes awajinensis subsp. mycoplanecinus strain NRRL B-16712 P067contig44.1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ========================== ======================================== ================== 57461 26 100.0 39 .......................... TCCGGATCAACGCTCGTGTCATGGACACACCACGGAGTT 57526 26 96.2 40 .......................A.. TCCGGTTACACCGTCCGTGTCACGGGCTTACGGCAACGCC 57592 26 96.2 0 ........................G. | ========== ====== ====== ====== ========================== ======================================== ================== 3 26 97.5 40 CCGGCCGATCCCCCTGCGGCCGGGAC # Left flank : GCTCGCTCTTCCGCCGCTTCGCCCTGGTCGCTGCTCTCGCTCCCGCCGCCGCTCTCGGCGTCACGCTGGTCGCCGCGCCGGCGCAGGCCGCGCCGGTCACCGAGACCACCATGCAGGCCGACATCGTCCGGCTGACCAACGTGCAGCGCACCGCGCACGGCTGCGCCGCCCTCAAGGTCGACGAGCGGCTGATCACCGCGGCGCGGGGGCACAGTGCCTACATGGGGCAGACCGGCTCGTTCAGCCACACCGGCAAGGGCGGCTCGAACTTCGTCGCCCGGGAGAAGGCCGCCGGCTACCCGAAGCCGTCCGCCGAGAACATCGCCTGGGGCTACCGCTCCGGCAAGGACGTGGTCAGCGCGTGGATGAAGAGCCCGGGCCACCGCGCCAACATCCTCAGCTGCAAGTCGAAGACCGTCGGCGTCGGCGCGGTCTACAGCGACAACGGCACGCCCTATTTCACCCAGGACTTCGGCTACTGAATTAAAAAGCTCGGAGTC # Right flank : CGTTCGCCGTTGTCAGGACCTTGCGGGTGAAGGACAGGACGGCGTGGCGGCCGAGCATCTCGCCCTCGCGGGAGAGGCCGTCCACCGTGGTCAGCCAGCGGTCGATTGCGGCCTGTTCGTCCTTGCGGTTGACGTCGTCGAAGACGATCGTGGCGTGGTCCGCCAGGCGGGGGCCGATCACCGGCAGCGCCGGGTAGCGGCTGTCCGGCCCGACCGCGGCGGGCGGCCCGTCGACCAGCAGGAAGTCGACGCCGTCCAGGTCCTCGCAGGCGGCCGGGTCGTACCAGGGGTAGACACGGTCGGCCAGCTCGACCGGGGCCAGCGGCGCGTCGCGCACCTCGGCCACCCCGGTCAGCCCGTGCGCCTTGAGGGCGGCGCGGGTGCGGTTCGCGTACTCCGGGTCGTGGTCGAGCGAGATCAGCCGGCCGCCGACCTGTTCCAGCGCGTAGGCCAGCCAGATCGTGGACGTGCCGCTGCCCAGCTCGAGGACCAGTTTCGGC # Questionable array : NO Score: 2.55 # Score Detail : 1:0, 2:0, 3:0, 4:0.88, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CCGGCCGATCCCCCTGCGGCCGGGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [2,2] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [0.00,-1.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [48.3-33.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.68,0.37 Confidence: LOW] # Array family : NA // Array 1 65927-67337 **** Predicted by CRISPRDetect 2.4 *** >NZ_LLZH01000279.1 Actinoplanes awajinensis subsp. mycoplanecinus strain NRRL B-16712 P067contig38.1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =================================== ================================================= ================== 65927 35 94.3 37 .................T..T.............. CCACGTGCACATCGCGATGCGCAACGGCGGCACCATC 65999 35 74.3 30 ......................A.AGTT.C.G.TC CGCGGTGACGCTGGTGCCGGCGACATCAGC 66064 35 94.3 40 ..............A.......A............ GACCCGACGGTCGAGGACGTCTACATCGGCACGCTCGCGC 66139 35 100.0 39 ................................... CGCGAGTACCGGTACATCGGCCTGGTCCGCGACGGCCGG 66213 35 100.0 36 ................................... GCAGCCTTCGACCCGGCCGACAAGGCACTGATCGCG 66284 35 88.6 49 .......................A.......C.CC GGGAGAGCGGAAACCCTGTGGGCTGAAGCCCTGTTCTGCTCGAGCCTGG 66368 35 91.4 37 .......A...........CT.............. TCCGCGGCACCTGTTCCTGGCGTTCGAGCAGGGCTGG 66440 35 100.0 39 ................................... GTCGAGATGTGGCGCGGCCGCCAGTGGCGTCTGCTGCTG 66514 35 97.1 41 ............................A...... GACGTTCTGGTTACAACTTAGGTCTTAGATCCAAAGATAGG 66590 35 80.0 29 ......................A.AGGT..C..G. CCTAAGTTCTTCCGCGAGTGCCGTACCGG Deletion [66654] 66654 35 100.0 37 ................................... CCGGTCCGCGTACCGCCGGTACGGGGCGCACGGGTAG 66726 35 100.0 38 ................................... TCCAGCTGCGTGATGTAGCGCTCGGGCGGGCTGAGCGG 66799 35 100.0 36 ................................... GCCGTGGAACTGCTGTGGTTCCTGCGCGGCGACAGG 66870 35 97.1 39 .............................A..... TCTGGCATCAGCGTCGAGCTGATCCGCAAGCTGGAGCGC 66944 35 100.0 36 ................................... TTACGGATCCCGGTCAGGCCGTTACCGATCGCTTTG 67015 35 94.3 39 ........................A.A........ GACCAAGGCCACCTGCGCCGTCAACCCGCGCCTGGCACG 67089 35 100.0 35 ................................... TCGACGAAGCGCAGATCGGCGGCGCGCTTCAGAGG 67159 35 97.1 38 .................T................. CGCGGGACAGCTTCGGCAAGGTCGTCAACGAGGTCCTG 67232 35 100.0 36 ................................... GAGAAGATCCTGCGGGAACGCTCCGACGACGGCGAG 67303 35 100.0 0 ................................... | ========== ====== ====== ====== =================================== ================================================= ================== 20 35 95.4 37 CCGCTACGGAGCCCGGCCGGGACGGCCGGGAAGAG # Left flank : TCGCAACCATGACGAGCCGACTTGGGCCGTGACCTTCCCGGTCACGTCGTGATCTCTCCCTCCCATGTTGCGAGCGTCAGCGCCTGCCCATCGAAGTCCAGTTCAAGACCGGTCACTTCATCGATCTCGTTGTGCATCGGCTGGAGCGCCCGCAGGCGCCTGGTCATCAGCGAAGCGAAGGGAGGTTCGCTGGAGGCGTCCCGCAACAACCAGCGCGACCCATCCCAGTCGTAGTCATAGTCGTCCAGCCACGAACGGTCTACCGCGCAGGTTTCTACCACTTCCAGAGACCAGTCGGCGCGGCCGGCGAGGAGGATTCCCCGGTCACCCTCGAAGACGAGGTGCACCGGCCCGACATTGGCCTTGGCGACTCCACCGGCGTAGTGCCAGGCCAGTCGTTCAACCCTCACCAACTTGCGGCCAATAAGCGCGTCCATCGCGATCGTCCAGACGTTCTTCCAAAAGCTTCGGCGGAAGCGATCAGCGACGATGAGCCCTTG # Right flank : GGGCTCGCAGAAACTGTGCCTTCTGAGCTGCCGTTTTGCGAGCCGTCGCGAGCGGTGTGTCGTGACGTTGTTTTGCATGGACCAATTTCGTTGGATTCCTGATGTTTTTAGGCTCTGAACTGCATGCGAGCGCTCCCCGCGGTTTCGAGGCTTACCGGAGCGCTCGTATCAGACTATCCGGACGCCATGAGTGGGTAGTGGTCTACGTCGGCCGATAAACGTGAACCGTCCCGTGTCGACGTCGCCGAGGTCGACGATGACTACTGAGTCTTCGGAGAGTTTCATCTTGGCCTCGACCTCGGCGCGAGCGTGAATCAGTTCGGTGCGGCTGAGGTCGCAGATGAACAGGGAGTATTGCAGGCGTTCGCCGTAGGATTCCATGACTTTGCAGACTTGGCGTAGGCGTTGGGGTTCGCAGATTTCGAGTGTCGTCGAGGCGCTGGTCGTCGATGGGGATCGAGACGCGTCGGCGGGTCTCGGCGTACCAGATTTCGGCGTGG # Questionable array : NO Score: 2.82 # Score Detail : 1:0, 2:0, 3:0, 4:0.77, 5:0, 6:0.25, 7:0.00, 8:1, 9:0.80, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CCGCTACGGAGCCCGGCCGGGACGGCCGGGAAGAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [6,1] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-17.10,-16.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [20-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [43.3-36.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.74,0.41 Confidence: LOW] # Array family : NA //