Array 1 7655-6244 **** Predicted by CRISPRDetect 2.4 *** >NZ_UAPN01000017.1 Acinetobacter haemolyticus strain NCTC12155, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== =============================== ================== 7654 30 93.3 30 ............................AA GATTAGAATAAGCATCAAGCCGACTAATGA 7594 30 96.7 30 .............................C AAGTAATAACTTAACACCCTCAACAGCTGC 7534 30 100.0 30 .............................. CTCGTCATGAAGGTTTTGGAGAAATGCTTT 7474 30 93.3 30 ............................AG AAAGCGTGGACTCCCCGAAAGTCGAATTTT 7414 30 96.7 30 .............................C TTAGGGCATCAAATAAGCTATGAGTTGCTT 7354 30 93.3 31 ............................GA ACGATCCAAACAATAACAATCCTAACAATCC 7293 30 96.7 30 .............................G CACCAATTGCACCTGCACCGATTGCTGTGT 7233 30 93.3 30 ............................AC CATATATGCCTAAAGAGCATTTACACCTAG 7173 30 93.3 30 ............................AA TCAAAAATCTATGATCAATGCACCAGTCGG 7113 30 96.7 30 .............................A CCCGCAAAAAAAATTTGTTATATGCTTATT 7053 30 100.0 30 .............................. CATTCGATCTAATATCGGGTCAAAAGCTAC 6993 30 100.0 30 .............................. GAGGAGTCTGTCTCCAGTCACAATCTTTCG 6933 30 100.0 30 .............................. TCGACGGAGTTAGAAGTTAAATTTCTTAAA 6873 30 93.3 30 ............................GA CAGAAAGAAATCGCGAATTAATTTCTGGAT 6813 30 93.3 30 ............................GC GAGTTTATTAACCGCGATGAAGCTGGCCGA 6753 30 96.7 30 .............................G TTTAATGCGGGTCTCTTGCCAGTTTAGCGG 6693 30 96.7 30 ............................A. CATCAATAGGAGATTTTAAAATGGCTAATA 6633 30 93.3 30 ............................AC AGATACGCACCAACTTTGAAAAAGTTTGCT 6573 30 96.7 30 ............................G. TAATTTATTAGATCAGCAACTAAAACAAGA 6513 30 96.7 30 T............................. AACTACACGTTCAGTCATGGCAGCCACCTA 6453 30 96.7 30 ............................A. TACCATCACTGCCACCAGTGCCGTTGCCGA 6393 30 100.0 30 .............................. TGAACGACAAATAGAAATCTTTCATGTGAT 6333 30 90.0 30 ........................T...CA TCATAATGACAGAAGGCGAGTCACGGCGAG 6273 30 83.3 0 ........T.A.............A.T.G. | ========== ====== ====== ====== ============================== =============================== ================== 24 30 95.4 30 GTTCATGGCGGCATACGCCATTTAGAAATT # Left flank : GTCAGTGGCTAGAACGATTGATGGATTATGTGCACATCATTCAGCCGCGTGAAGTGCCGCAAGCCAAGGTTACTGGTCATGCACACTATTATCGAGTCAATCCGAAGATGAGTATAGAGGAACGCATTGCTCATCAAGCACAGCGTCATAATATTCCTTTGGCTGAAGCTAAGCAGCATTTTAAACAATATGTTGAGCAACCTGTGGTTGAGCCTTATGTTAGTTTAAAAAGTCTGAGTGCTAAACGTGAGGAAAATATAGATCGACCGTATCGCTTATATATTGGTAAGTCTGTTGCTGATGAGGCGAAAGATGGGAAATTTGGAACGTATGGGCTAAGTCGAATGGCAACAGTTCCAGAATTTTGACCCAATATTTTTTTTATTCTTTAACAGCTTAATAAAATCAATAAGTTACAATAAGTCGTTTTTTGATTGGGTAAATTGCTAAAACCTATGATAAGTACTTGTTGTAACTCATATTTTTACTATAATTTTATA # Right flank : GTAAATGGTTATTCCTAATACATTCAGGCACTTTAATTTTTAAATAAGAAAATATACCCTGAACCTAATATATTTTTAGTGAATTTTTCATGCGCGGTCTTTATCTCATCACCAATGATGATCCCATCCAATTATTACTTGAAAAATTAGAAGTTGCTTTAGCGACGAGAAAGGTTGCGATTTTGCAATATCGCCGTAAGAAAGTGGCAAAGGCAGATCAACCACGTGAAGTTGAACAGATCAAAACATTGTGTGAAAAGTACCAAGTACCTTTTGTCATCAATGATGATTTGGCTTTAGCTGAACAATTTGGATTAGGTGTCCATTTGGGGCAGTCTGATGGGGAAATAAGCGATGCTGCTGCACGTTTGCCGCAAGGTGTGATTATTGGTCGTACATGCTTAAATTCACTCGAATTAGCTGAAAAAGCAATTGCTGATGGGGCGACTTATGTTGCTTTTGGTGCAGTCTATGCCACCTCAACTAAACCTGAAGCAGGT # Questionable array : NO Score: 5.32 # Score Detail : 1:0, 2:3, 3:0, 4:0.77, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.29, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCATGGCGGCATACGCCATTTAGAAATT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: R [matched GTTCATGGCGGCATACGCCATTTAGAAATT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-6.60,-8.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [6-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [75.0-80.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.28 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 318640-318847 **** Predicted by CRISPRDetect 2.4 *** >NZ_UAPN01000006.1 Acinetobacter haemolyticus strain NCTC12155, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 318640 28 100.0 32 ............................ CAACACATACTCATCAAGAATTACTTTTAATT 318700 28 100.0 32 ............................ AGTACCCGAACAACACACGATCACATTATCGG 318760 28 100.0 32 ............................ TAACTTTGTAGCTGTATCTGTAGCCATTGTTG 318820 28 85.7 0 ........A.............C.T..T | ========== ====== ====== ====== ============================ ================================ ================== 4 28 96.4 32 GTTCACTGCCGCATAGGCAGCTTAGAAA # Left flank : GGTAAATGCGATTTGTCTTTGTAGATTACTCACCTCAATTGTATCTGCATCCACGATCGTTATTTTGCCTACACCTGCACGAGCAAGTAACTCTGCACTTGTACAGCCGATCCCTCCAGCACCAACAATCAGTACATTTGCCAATTTTAATTTTTCTTGTGCTTCAATATCCCAACCATCTAATAAAATCTGACGACTATATAAATGCATTTCGTCATCAGTTAATTCAAAAGTATGTTCTAGATGATCAGACACGTTCCATGATCTCAAAATCGGCTTAACGAATGCTGATTTTAAGTGGCTAATCTCATTTAGCAAAGCATTTAATGCTTGCTGCATCATTTATTTTGACAAATCAACGGATTTACCCCAATATTTTTATTACTCTTTAACAGCTTAATAAAATCAATACCTTATGAATCAGCATAAAAACTTTGGGTGTTGAAGTATTTTTCAACCCAAGCTAATGTTTTTTCTTAATTTATTTATGCTATTTTATT # Right flank : TACAATCAAAAACAACCCACAGTACCTAGTGAAATTAATGACTTATATCGCTTTTAAATAAACAATTTGTTAAATTATATAAATAGAATATAAGAGATTTATCATGGAAAAAACTCTATTAAAGTTCATCTGTCTTATAACATTGTTAGTTTCAACAAATCCAAATATATATGCAAATGTTTACATACCAATTCCCTCATTAAAAAAGCCTAAAATATCTCCGCATATTAAAGCTCAAGCACTCAAAACGGATGAGTTTGATGTATCTACCAAACAATTATTAGAAAAAGGCTATATTCCTATTAAATCCCAAACATTTAATGGTAGAGATGATTTTAGAGGTTATGAGCACGTTGTAGCAGCGCTAGAAAAAAGAGCTGATCAAATGGGAGCTCAAATTGTACTATTTACTAATGAGAAGCCAACAGGAAGTGTAGATTATTATAGTTTCACCACTCCCTTTCCTCAAAAATCAACAATACAATCTAACTTTGATAATT # Questionable array : NO Score: 5.68 # Score Detail : 1:0, 2:3, 3:0, 4:0.82, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGCATAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCACTGCCGCATAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [78.3-71.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.65,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //