Array 1 71566-71817 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACAOD020000001.1 Candidatus Phytoplasma meliae isolate ChTYXIII-Mo ChTYXIII_Contig1, whole genome shotgun sequence Array_Orientation: Unconfirmed Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ========================== =============================== ================== 71566 26 100.0 31 .......................... ACTCAAACTAGGTGATTTCAACTTTTTCGGT 71623 26 92.3 30 ...............A..G....... GCTTTTCTGGGTGATTTCAACTTTTTACTC 71679 26 100.0 31 .......................... ACTCAAACTAGGTGATTTCAACTTTTTTGGT 71736 26 96.2 30 ..................G....... GCCAAATTAGGACTTTTCAACTTTTTTGGC 71792 26 92.3 0 ...............AC......... | ========== ====== ====== ====== ========================== =============================== ================== 5 26 96.2 31 TAACATATAGAGTAGGAAACCAAAAA # Left flank : AAAAAGTTGAGACAATGAGAATGGATGTTTTTTTGGTTGAAAGTTGGAAATTTGAAGAAGTTTTGTTTATTGGCGACGGCGACTTTCGTCGGTTTTGATGTTGGTTAAGATAGTCTTGTTTTTAAAAATTATGGTCTTGAAAAAGATGGAGGAGATGGTGGTGGAGAAGCGTGGTAGTGAGCGGTAGGTTTTATGGTGCCAGCGTTGAACTGCATATCAAAGTTACCATTAAAACCAAAACTGTCGGGTGTCCAAAAATTTTCTTCGTAATTGAATGATATTGGTGAACCTTGATAAAGGCGAGTATTATTGAAAATACTTAGTTCAATGCCGCGATATAGTTCGTTGGTGTATAAAGTGCAATCTTGTTTGTTTAATAAATCTCTGACGCGATTGGCGGAATATTCAACATTCGGTTTGAAAACACAATTATCTTTCCAGTTTTGGAGTTTGGTGTCGTATTTTTGCCAATTTTTACATTGGATTTGTCGTTCGTTTCA # Right flank : AAAACTTTTCTTTTAATTTGTCCTTTTCAATGACAATAAACTTGAATCAAAAAAACATTTTTTCAAAAGTCCAACTTTTTGGTCTAACTGAGTATTTTTTTATCATTCTCTTCACAAATATTTATATTTACTAATAAAATCCAAACTGAGAGCAGTTTGGATTTTTGTCTTATTAATTATCCTTAATTAACTCAATATACACAAAGACATCATCTCTTCAAATCCCTTAACGAATTAATAAGTGTTTATCTTGCAAAAAAAAAAAAAAACAAGTATAATTAAACTTAGTAAATAAAAAATAGTTTATTAAAATAATTTATGAATATATTTTATTTATTAATTTATTTACTTTATTGTTGCAAAATATTTCTTTTTATTGACTTCTTTTATCATTAAAAAAACAAAAAAGGAGATTGCTTAAAATGTGGGCAAATGAAGTTAAAAAAAGAAAAAAGAAAATTATAATAATTGTCAGTTTAGTTGTTATATCAATAATTAGC # Questionable array : NO Score: 2.51 # Score Detail : 1:0, 2:0, 3:0, 4:0.85, 5:0, 6:0.25, 7:0.01, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : TAACATATAGAGTAGGAAACCAAAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:73.08%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: NA [2-1] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [65.0-68.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: NA [0,0 Confidence: NA] # Array family : NA //