Array 1 106580-104835 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_QTVE01000004.1 Ruminococcus sp. AF37-20 AF37-20.Scaf4, whole genome shotgun sequence		Array_Orientation: Reverse

  Position	Repeat	   %id	Spacer	Repeat_Sequence                 	Spacer_Sequence                        	Insertion/Deletion
==========	======	======	======	================================	=======================================	==================
    106579	    32	 100.0	    34	................................	GTACTTCCTGTTCCAGAAGTTGAGATAGAAGAAT     	
    106513	    32	 100.0	    34	................................	GTCATATGCTCTAACGCGATAGTTTCCGCTAGGC     	
    106447	    32	 100.0	    33	................................	TGACCGTTCGCAGGCGGTTAAGAGTTCATTTCC      	
    106382	    32	 100.0	    35	................................	TGATATAAAACAGGCTGTATATATGCAAATGTCCT    	
    106315	    32	 100.0	    35	................................	TGACAGCTTCGAGCGTAAATCACTTGCACCACTTC    	
    106248	    32	 100.0	    34	................................	ATTTCCTCATTTACTAATAGGGCCGGCCTAGATC     	
    106182	    32	 100.0	    36	................................	GATAGAGTTGGCTATCAAAGATTAAGCTAACAAAAA   	
    106114	    32	 100.0	    33	................................	CGTATTCTCATAACTGTATCCTCCTGACTAAAA      	
    106049	    32	 100.0	    34	................................	CTTCGATAAACAAGGTATCAAACTTGCCATTCTG     	
    105983	    32	 100.0	    33	................................	CTGTTCATCGTATAGTGCTTCAATAAGCCGTTT      	
    105918	    32	 100.0	    34	................................	ATAAACAAGCTTGTCCTTATCAACTTGCGCACCA     	
    105852	    32	 100.0	    33	................................	AAAATCATCATAAGCAACGTCAAGACGAGATAT      	
    105787	    32	 100.0	    34	................................	GTTTCTTTGCCCAGTTAACATAATCTGCTACAAC     	
    105721	    32	 100.0	    35	................................	ATTACATTAGGCAAGCTATATCTGGAAGCCTGAAT    	
    105654	    32	 100.0	    33	................................	AACATGGGGTTGATAGAAAACACACCGATAGGC      	
    105589	    32	 100.0	    33	................................	TTGTGACGCACTGGACGGCCTAGCGGTGATATT      	
    105524	    32	 100.0	    33	................................	TACAATTTCTTGAAATTTAGTTTCGTCAGCGTT      	
    105459	    32	 100.0	    36	................................	GCCATTCAGGGGAAATTTCAACGCTGATATTTGTAC   	
    105391	    32	  96.9	    35	.......C........................	ATTGTGGTTATAGCATATTTCGCCAAAAAATGCAG    	
    105324	    32	 100.0	    39	................................	GTTGAGCTATAATATCTGTGCCTGAGTTATTAATAACAC	
    105253	    32	 100.0	    35	................................	GCAGTCAGCGTTTTGGTAAATTCTGCGTTGTACAT    	
    105186	    32	 100.0	    34	................................	TGCTTCCACCACGTTGACGAGGTTGACGGAGATA     	
    105120	    32	 100.0	    34	................................	TGGAAAGCGTTCAAGTATTCTCTGATACGTCCTA     	
    105054	    32	 100.0	    34	................................	TTCAGACAGACACATCATGCAAGACAACACGCCT     	
    104988	    32	 100.0	    34	................................	TTATGGGAATCAATGAAGATTTACGCATAATCGG     	
    104922	    32	  93.8	    24	..............................TA	CGTGGCGCAGACCATAGAGAAGCA               	Deletion [104867]
    104866	    31	  81.2	     0	..............T..AA.A..-....T...	|                                      	A [104840]
==========	======	======	======	================================	=======================================	==================
        27	    32	  99.0	    34	GTCACGCTCCACGTGAGCGTGTGAGTTGAAAT	                                       	       

# Left flank :   GGCGAGCTAGATGAGTACCCGAACTATCTGCTGAAATAGAGGTGATATAAATGATGACCTTAGTAAGCTATGATGTATCAACAACAGATAATAAGGGTAAAACAAGGCTTAGAAAAGTAGCCAAAGAGTGTCAAAATTATGGTCAGCGAGTGCAGAACAGCGTGTTTGAAATAGACGTAGACTATGGCACTTTTCTGAAAGTGAAAGATAAACTTCTGAATATAATAGACCCAAAGCATGATAGTCTGCGGATATATTACTTAGGAAACAATTGGAAACATAGAATAGAACACTACGGCACCAAAGAGACCTATGACCCCGAAGGCGTCCTAATATTTTGACCAGCGTACCCCAAGTGATCCACAAATCCCTAGTAAGTTCGCATGAAAATGCCATGCTATTTGTGAATGCACAGTGAACAAAATCAAGTCGATACCCATTAAATAAAAAAATAAGTCCGCATCACGTTGAGCAAGCACCAGATATACACAACATCAAGG
# Right flank :  CTGTATGTCACGGATATTAAGATGTGTTGTATATATTGTCTTTTCTTAAGTGTTGAATTTTTTACTATTGCATTGTGATATATCGTAATGAAAATATAATATTTTATTCAAATTTCTGCTTATGTGTACAAAAATTTTCCCCACAAATAAGATAATTAGTGCTATAATAGTCTTTACAATAAAATGTTTTCATCAAGGAGGATAAAATAATGAGTTTGAAAGAATATGTAGCTTTGTTACCTACATTGGATAAGGATACTATATATACGAGTATCCTTATTTTTGTAGTTGTAAGTATTTTTAAACTGCTTCAAAAAACAATAATTTTGGATATGAACAAATGTGATCGTCAAGCTGACAAGGCTATTAAAAAAATTGTTGATCTAATAAAATTGTTAGATAATCCGGTTTTAGATTACAGCAAATTTTATGAAGCATATTTATTCGTTGATATTAAAGAAAGAAAAGAGTTAAAGGCTTATATAGATAATCACGAAAAA

# Questionable array : NO	 Score: 6.19
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:-0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTCACGCTCCACGTGAGCGTGTGAGTTGAAAT
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     F [8,7] Score: 0.37/0.37
# 	Reference repeat match prediction:         R [matched GTCACGCTCCACGTGAGCGTGTGAGTTGAAAT with 100% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  R [-7.30,-8.70] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      R [10-0] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: NA [71.7-63.3]%AT Score: 0/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         R [0.37,5.28   Confidence: HIGH] 

# Array family : I-C [Matched known repeat from this family],   
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