Array 1 587170-590352 **** Predicted by CRISPRDetect 2.4 *** >NZ_LLKN01000001.1 Salegentibacter mishustinae strain DSM 23404 Smish_1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ========================================= ================== 587170 37 100.0 37 ..................................... AAAGCCCTTTTTCTTTAAGAATTGCAGCAACCGTAGG 587244 37 100.0 37 ..................................... TTAGGCGGGGTTACAGGAGCAGTTAAAGGGGCTTTCC 587318 37 100.0 36 ..................................... TAACCTACAAGGCGAGTTCTTAGAAGAGCAGGAAAT 587391 37 100.0 36 ..................................... ATAAGTTTCTACAGGATAACAAAGGGCTCATTCCTC 587464 37 100.0 37 ..................................... TGCCTAACGGAGATTTAATACCGGGGCAAGTTGATCT 587538 37 100.0 35 ..................................... AAGTCAAGGGATATTATAAGAAGTGAAAAGTATAA 587610 37 100.0 35 ..................................... TTTAATCGATATTGCATAGATGTTTTAGGCAACAT 587682 37 100.0 36 ..................................... CAGAATGGAAAAGGAGCAACTGTATAAAGAAATGCT 587755 37 100.0 36 ..................................... TATCCTGTACCTGATAAATCTGCATTTGAGTTTATT 587828 37 100.0 36 ..................................... CTATATTAGAAGTAGATGAGATAGTTTCAAAGAACA 587901 37 100.0 36 ..................................... ACACGCCCTGCAATCTTATCGGCTTGCGAGTATCTA 587974 37 100.0 37 ..................................... AATCCTATGTTGTTTAGAATTATCATAATTGAGTAGG 588048 37 100.0 35 ..................................... TCGAATTTTGATAAGGTTTATGGCAGTATTGATTT 588120 37 100.0 36 ..................................... AATATTTGGTGAAGTCTATAATAGTGGCCACCACGC 588193 37 100.0 36 ..................................... TGCAGCACACCAGCAAGATCTGGATTATCGGGTAAC 588266 37 100.0 37 ..................................... ACCTTTACACTATCTTAATGGCCTTTCCAGAAAAAAA 588340 37 100.0 36 ..................................... TTGGCGGGGTTGCCGCTCAAACTCCTACGGCTGCTG 588413 37 100.0 36 ..................................... AAATCTATAGTAGGGTTTCCGCTGTATTGTCGCTTT 588486 37 100.0 37 ..................................... AGCTTCTCGATTCTTCTTGCGATAACATCCCGAAGGG 588560 37 100.0 34 ..................................... TTGAGTTCGGAACAGGTTCAAGGGTTAGCGTTCC 588631 37 100.0 36 ..................................... ACAATGGTTTCAAAGTTAGAGAAGTTCGTAAAGACT 588704 37 100.0 36 ..................................... GGGGATGCTAATTCAGAATTAGACAGACAGGAAGAA 588777 37 100.0 35 ..................................... AGGATCTCTTTTTTTGAAAGTCCGTTGGTTTCGGT 588849 37 100.0 36 ..................................... TTTACAGGAATTCGAGCGATTATTTGGTAGAGTTCC 588922 37 100.0 36 ..................................... ATTCGCAGTTAATGACACCACAAGAAGTAAAACAAC 588995 37 100.0 36 ..................................... TATAGATTATCTAAATATCCCATTACTTATTTTTCA 589068 37 100.0 36 ..................................... GGATCGTCCAGGTTTAAAATAAACTGGCGAGCAATA 589141 37 100.0 36 ..................................... CAAGACAACGTAAAGTGGTACGACTATGTTTGGGCT 589214 37 100.0 41 ..................................... GTGAAAAGAGAAAAGATAATTATAGGCGTTAAGTTTTCAAA 589292 37 100.0 38 ..................................... GTGGAACTACTGACAATGTAGAGATAGCAACAAAATGT 589367 37 100.0 35 ..................................... GATGCTAACGTTAAAATAGGCAACGAGTATATTAA 589439 37 100.0 36 ..................................... TCCAACACCTCATTAACTCTTTGTTGGGCGTAGCGT 589512 37 100.0 37 ..................................... CTGTTAATCTTTGTAAAGTCTGTAGGATGTGCATCTT 589586 37 100.0 38 ..................................... GGCTTTCTATTATGGGTAAGGATCAACTTAACCGGAAA 589661 37 100.0 35 ..................................... TGACCGTATTTCCTTCATTGAAATCCCAGAAATCA 589733 37 100.0 36 ..................................... CCATTCAAATTAGAATTAAAATAGAGCTTATTAATC 589806 37 100.0 37 ..................................... TTCTGGCACGTTAACCTCATTATCTTCTTCCAATACA 589880 37 100.0 37 ..................................... CGTAGAAAAAAGTTTTGAAGGTTTGTAACGCACGTCT 589954 37 100.0 36 ..................................... ACCGAAGAATGGTTGATTAGGTTAGGGTTTATTAAA 590027 37 100.0 37 ..................................... CAATCTGAAGTTAACGCCTCGGTTATAAGAATAGTAT 590101 37 100.0 35 ..................................... TGAACAGCAATAACACAAACAACAATGAAAACACT 590173 37 94.6 36 ................T.A.................. ATGTTGTACTTTGCTTTGAGTTCTGAGAATTCCATA 590246 37 83.8 35 ....A...AT......T.A.....T............ GATCTACCCTGAACAATTTCCCCTAGAATAATTCT 590318 35 86.5 0 ........G...............AC....--..... | ========== ====== ====== ====== ===================================== ========================================= ================== 44 37 99.2 36 ATTCCAGACCATTCCAATTAGAAACTAGGATTGAAAC # Left flank : TGCCCCCTTGGATTATAAATTTGCACTTTGGAAGGATAAAGTTTATGATACCTATAAACAGCAACTTTATTGTTATGCGGTGTTAATTGAAAAAACTTTTAATACCAGGGTAGAAAAAGGATTCTTGGTATATACGCGTAGCAAACATAAACTGGTTGAGGTTCCAATTCCGGTGGAAGCCAAGCAAGAAATCAAAACCAGTATGAAAAAAATGCTTGATATTATTGAACAAAACAAATTTCCTAAAGCCACTAAATTTAAGAAAAGATGTGTAAATTGTACCTACAGGAACATTTGTATTAAATAAGCGTTCCGGGTATAAATTTATTTTTAAACAACTTATTTTTTTGGCTCATGGCAGTAAGATCGGGACATAACGAATACGGAAACCATTTGAAATATATGGTTTTTATGTTCTTTGACGTATTGAAAAAACAGATATTAGAAGTTGAAGAAATTGCCAGAGGGTACATGATTAAAGGTTCTGGGCAACGTATCGC # Right flank : CCAATATTTAAGCAATTCAAGCAAATACCGCAGTTAAATACGTTTTTTAAGCTCATTTATAGCTATTTCGCGTTCTCGAGCTCTTCCTACTCGAAGCGCGTCTACTAATGCTAACAATTCGTGCAGAATACTATCTTTTAGAGCAGCTTCCGGAGCTGAAGAATATATAGGTATTATACTTTGTCCTCTCAACATTCCTTTACCAGATGGCCAAACATAATTTTCACTACTTTTTATTTGGTCCCTTAAAGGAGCAGCTGAGTGAGAAGTTGGAATACCCCTTACTACCGGTCCCGGTTTTTGTGGAAAAACATACTTTAATCCGAATTGCAAAAAATCAATGAAAGCCAGTTTCATTACTTTTTTTCCTTTAGGATCTAATAGACCTGAATATTTTGAACGAGCTACCGATTCACTCACTTCAGATTGGCTCATCCCTAAAGTCTCGGCTACATATTTTTGTTTCCAGGTGACATCATCAAGACTAATAAGCTTTAACA # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:0, 3:3, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTCCAGACCATTCCAATTAGAAACTAGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:64.86%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-0.80,-2.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-12] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [58.3-73.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0.64 Confidence: HIGH] # Array family : NA //