Array 1 87031-84378 **** Predicted by CRISPRDetect 2.4 *** >NZ_JABAPA010000008.1 Arcanobacterium phocae strain ARC109 NODE_8_length_102294_cov_59.225481, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================== ================== 87030 29 100.0 32 ............................. GAAGAAGTATTCATCACTTCAATCAGCGCAGA 86969 29 100.0 32 ............................. GATCATTTCCACTAGCTCAAATGCGAATCTAC 86908 29 100.0 32 ............................. ACTGCTGATTCGGTAATCGGAGCCATGATTAC 86847 29 100.0 32 ............................. ACTTAGCTACTCCGGTTCCTGTAGGATCGCCT 86786 29 100.0 32 ............................. CTGACAGCAGACCCAGAGTTACGTTATGTAGG 86725 29 100.0 32 ............................. ATTCTGCAAGTGCCCTAGCGCGTTCGTTAGTT 86664 29 100.0 32 ............................. ATCATTGCGGGTGGAAGCCCGTGCCAAGATCT 86603 29 100.0 32 ............................. TTCAAGTTTTCCGGGGATTTCTACCGTATTAG 86542 29 100.0 31 ............................. GTCGTATGCGAAGGATAGCTGGGATAGGCGT 86482 29 100.0 32 ............................. GATCTTGTCGGAAATGAAATGAGCGCCGCCGA 86421 29 100.0 32 ............................. ACCTGTTGGAACTGTGGTCCCGGAGGGGACGC 86360 29 100.0 32 ............................. ATGAAAGACCTAGCCCGGCTTATCAACTATCA 86299 29 100.0 32 ............................. TTGTTACCAGGCGCCAAAGCATGATCAGCATC 86238 29 100.0 32 ............................. GAAAGGTCGAGTGCCGGTTTTTAAAACCAACC 86177 29 100.0 32 ............................. ATATCCCCGTCCTGAAATACCTGGCGCGGCTT 86116 29 100.0 32 ............................. TACATTCGGATCACTATAGATCTTCCGTTTTA 86055 29 100.0 32 ............................. ATAATTTCTTCTCACCGACCGCATGCCCCGGA 85994 29 100.0 32 ............................. TCGTCAGGGAATTATGGAGAAGCTACGCAAGG 85933 29 100.0 32 ............................. AATTCTCGGCTAAAGCTATGCACGGCGTTCTC 85872 29 96.6 32 ............................T CCGCGACCGTGTGGGTCCCAAAGCCATACGGG 85811 29 100.0 32 ............................. TAGAAGCGTGGAAATTCCGCCGGCAAGTGTGG 85750 29 100.0 32 ............................. CGTGCAAGATCCTCGCACACCGATTCCCGGGA 85689 29 100.0 32 ............................. GAATGGAAGTTCCATAGAGTGCCTTCGCCACT 85628 29 96.6 32 ............................T TATGCCGGCCGGCGTCGCCTTCTATCTAGCAG 85567 29 100.0 32 ............................. GCTGATCCCTACAGCGACGAAACACTCGCTTT 85506 29 100.0 32 ............................. TTCATCGTTGAGAGTTCCCCAACCAACTTGCG 85445 29 100.0 32 ............................. GTCGCCGCAAGATGCATTACGTGCAACAGCGA 85384 29 96.6 32 ............................A AATCGATTTTAACCGGCGGGATCACAAGACCG 85323 29 100.0 32 ............................. TCACGGATCAGCGTCGGAGCCTCATCTTGTAA 85262 29 100.0 32 ............................. TTCCAGTCGGGGTTAGCTAGGAATGATTCAAG 85201 29 100.0 32 ............................. AGGGAAGATGCAGACTGCGCAAGGCGCGCAAA 85140 29 100.0 32 ............................. TGAAGACCAGGCACGCACTTGGAAGAAGCAAG 85079 29 100.0 32 ............................. GTAGCGACGTGTGCGCAAGACGCAGTGAACCT 85018 29 96.6 34 ............................A CGGTTTGTCCTTTCGGCACGCTGATAGTGAATGG 84955 29 100.0 32 ............................. ATCGAAAATCTGGCTAGACTCCTTACCACCGG 84894 29 100.0 32 ............................. GAACTCTGGCATTTTATGTTCGTCTAATTGTG 84833 29 96.6 32 ..................A.......... ATCACAACCTTACAACTACCGGCAACTGACGG 84772 29 100.0 32 ............................. GATAGTCGCCACCCTGACATTGGGCAGCGAAA 84711 29 100.0 32 ............................. GCTAGCTAGGAGAGTTCCTTTCGTTAATGGTT 84650 29 100.0 32 ............................. AAAAAAGACCACCAAACGGTGGCCTCAGTCTT 84589 29 100.0 32 ............................. TTCGGCGACTACCCCGCCGAGGGATGGGCGCT 84528 29 100.0 32 ............................. ATCCGGCGCGTTTACGGCAATATTCCATTACG 84467 29 100.0 32 ............................. AAGGTGATTTTGAAACCGGCTGGAAAGCTTGT 84406 29 96.6 0 ........................C.... | ========== ====== ====== ====== ============================= ================================== ================== 44 29 99.5 32 CTCTTCCCCGCACACGCGGGGGTATTTCC # Left flank : TAGACGCGATTTACGGAGGCAAATTCATAGCAAGCATATATTGGAAGACATGCTTGGCACGCTCATGGAGATCTTAGAACCACACCTGCCGAATCGTGATGATGATCGATTGATCAATGATAATGGTGAAGTTTCTGGGCACGTACAATACGGAAAAGATGATGAGTGATGTTTGCAGTCTTAACAATATCTGCAGTTCCCGAGCATCTTCATGGCTATGTAACCCGATTTCTCACTGAGGTTGAAAGTGGGGTTTACGTCGGAAATATTTCTCGGAACGTGCGTGAACGCCTATGGGAACGTGTGAGTAGTACGCTTGACGAAGGAACTTCTACTATGATTTATAGCGACCCGCGACAAGAACAAGGATTCTCGATGCTCACTGCAGGAAAAAATTCACGAAAAGTATTGGACTTAGACGGTCTAACCGTTGTGTCCATGCGTCCTGGACGTGGAGAATCCAAAATTCGAGATCGTTGAAAATAAAGGGTTTCGTTAGT # Right flank : AAAATTTGAAGGCGATTCAAAGATGGGCGCTCAAGTGATCGGAACGATCATGATCAAGGTAGCGCTTCTTATTGTCGCTATTCAAAATGTAGATCTAATTCTTAAAGCTATTAACGAAGCTGGCGAAACACTTATTAACGGGCTGAAAAAGTATGCAACAGTCATACAGGCTAACCCTGTCAATATCGGTGATCTTGATATGGATACTCTAGATATGATCGGCGCAATGATCATTCTATTCTTGCCCTGGCTGATTTCAATGCTTGGCGGCATCGTCGTAAAAATCGTTGTACTCTTGCGATTTGCTGAGATATACATACTTTCTGCTGGGGCAACTCTACCGTTAGCATTCTTGGGTCATACCGACACAAAATAAATTTCGATCGGATACCTCAAGAAGTATGCAACGGCCATGCTTCACGGTTTCACGATCATCCTTGTCCTGATCATCTTTGCCAAATTCCAAGGAGCCGGTACAGACCTAGGAGAAAACCCAACAG # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTCTTCCCCGCACACGCGGGGGTATTTCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [7,3] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-12.30,-13.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [56.7-56.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,0.78 Confidence: MEDIUM] # Array family : NA //