Array 1 15854-15526 **** Predicted by CRISPRDetect 2.4 *** >NZ_BCFK01000046.1 Bifidobacterium aesculapii strain DSM 26737, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ======================================== ================== 15853 36 97.2 36 ............C....................... GACCTATTCACCGTCTCAGGCCATCGCCACCGCCAA 15781 36 100.0 39 .................................... TTCAGCGAGGCCGGCATCGCCATCCACCCCGAGGCCGGC 15706 36 100.0 33 .................................... AGCGTGTACGGCTACGCGGCTTTCGCGACCGTT 15637 36 94.4 40 ...........GC....................... TGACGGTTCCTGTGACGGTTTGGGTGAAGTGGGTTTCACC 15561 36 94.4 0 ............C......................A | ========== ====== ====== ====== ==================================== ======================================== ================== 5 36 97.2 37 ATCTCCGGAGTATTTCTCCGGAGACTTCATTGAGGG # Left flank : AATACGAGCCCCCGTAGCCATGCTCCTCGACCAGCCGGTCGTACACGCGCCTGGCCGTATGCCGCTGCTTGCGCGGCATACGACGGTCCGCCTCCAGCCAGCCGTCCACCACCACGGCGAATTCGTCGATCTTCGACCCGTACCGCCGGTCGTCCGGACGCCTCGGGCTCAGATCCTCCATATCCGCGTACTTCGCGACCGTGCCGCGGCCCACATGCAACCGCCGCGCTATCTCCGCGCGGGACAACCCCTGCCGGTCGAGTCTCCTGATATCTTGCACGATGGGCATCGGTATCGCATGTTCCTTTCCTTCCCGAGCACAGGCCGGCGGCAACCGGCCGAAACGAGCAATCAGCACCCGGGAATATACAGGCGGCGGAACCGATGCCTCCCACATCACCCCAGAACGATGACGACACCGGGGAAAACCATCAGCCCACCCTGCGGAAAAACACCGCTCAACCTGCCGAACAAACATTGAAGCAATACGCCCAAGTAGT # Right flank : ATCGCCATTGGCGCACATGGCAGCCGAAACGGGCGCATCTCCGGAGTGTATTGCTTCAATGTTTGTCCGGTGTTGAGCAGTGTTCCCCTGCAATAAACCGGTGTCGAACACCTGGTGTCGAATTGCAATGATTCTGGTGCCGGGTGTCAATAACGGCCCAATCGGCACTGGTGCTGAAGCGCAATGACCAACGTGCTCGGTATAGCCAGTCCGAACCTGCGCAGTTTATTGACGAACCTGCGCAGTCGAAGGGCTAACCTGTGCAGTCGAGCAACGAACTTGCGCACATGCTTCCTGAAGAAGGGGTGCTTGGCGTAATCCGGCTTATCGTAGAATGGCTTGATTTCAACCTTTCTTTCGTGGTCTGCCAAAGCCGGCGGACTGATTCACCTTGTTTCTTCAGGACCCCACTGCGCAGGTTCGGCATCAAAATGCGCAGGAATGGCGCGAAATCGCGCAGGTTCGGCACTGGAGTGCGCAAGTTCAGGGCTGAACCGCGC # Questionable array : NO Score: 2.84 # Score Detail : 1:0, 2:0, 3:0, 4:0.86, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:0.92, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATCTCCGGAGTATTTCTCCGGAGACTTCATTGAGGG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [11,7] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-6.30,-7.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [4-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [43.3-50.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,0.78 Confidence: MEDIUM] # Array family : NA // Array 1 13576-13996 **** Predicted by CRISPRDetect 2.4 *** >NZ_BCFK01000059.1 Bifidobacterium aesculapii strain DSM 26737, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================= ================== 13576 36 100.0 28 .................................... CGACTGGAACGACTGGGTTGACCACTCC 13640 36 97.2 28 ..................C................. ATGATTTCGTGCAGGCGCAGGGGCGTTC 13704 36 97.2 28 ..................C................. ATGATTTCGTGCAGGCGCAGGGGCGTTC 13768 36 100.0 29 .................................... GAATCCGTTCATTGGTGGTGTCTCCTTGT 13833 36 100.0 28 .................................... TGAGTTTGTCCATCTGCTGCCAGAACTC 13897 36 100.0 28 .................................... GGGAATTGGACCGTCCGACCATGCGCCG 13961 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================= ================== 7 36 99.2 28 CAAGCTTATCAAGAGGGGTGAATGCTAATTCCCAAC # Left flank : GCTCAATGGTGCTGGGCTGACGATTCCCAGCTCGCTGAATGATTTCGCCCAACAATATGGCTTGTATTGCGAGGGTCGTATCGACAGATTACCGGTGCCCGAGTATGCGGGTAGCATATGAAGACGGATGAGGACAGTGGCGGCATGTGGTGCCTGGTGATGTTTGATTTGCCGGTGAAGACCAAGCAGCAGCGCAGTGCGGCCACCGAGTTCAGAAACATGCTGTTGGACATGGGATACTCCATGGTGCAGTATTCGGTCTATGCGCGTTACACGCCTACGCAGGCAGGTAATCGTGCGACGGTGAAAGCGATCAAAGCCGCGTTACCGGAGCGCGGGTATGTCCGTGTGCTGCATATCAGTGACCACCAGTGGGCGTCGGCGTTGCGTTACGCCAATCTGGAACCGGAGGATGAGGTGGAGACACCGGAGCTGTTCACGCTTTTTTGAAGGTGAAAAGTGCCGAAAGCGGCAGAAAATAGCCCCTCTTGAACGGCTAT # Right flank : CCGACAGCTGCTGCGCCGTCCGTCACCAATCCTCGGCGAGGAGGAATTCGTCGATGCGGCGGTGCTCGATGCCGTCGCGCGGGCGCAGGATCGGATCCATCGAGACCACGGTCTTCGGATAGTTGTCCGGAATGTCCCTGAACACTCCGAACTCGCGTTCCGCGGTCTTGTCGCTGTCGATGAGATACGTCACCTGCACGTACCTGCGTCGTTCGCCTTTGTCGAAGACGAAATCGACCTCCTTGCCGTTGACGGCGCCGACGGTGACGGCATACCCCCTACGCAACCCCTCCATGGCGATGATGTTCTCCAATACCCCTTGGATCTGGGCGAGCCCGTCGCCGACAATCGCGCCGCGTAGCCCATGGTCGGCCACATAGTATTTCTGCAGCGTCTTCAGCACCTGCTTGCCTGTCAGGTCGGTGCGGTTCATGCGCTCCAACAGGAATGCTTCCCGACAGTATTCCAGATAGTTGATGACCGTTTGCGCGCTGACGTCG # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CAAGCTTATCAAGAGGGGTGAATGCTAATTCCCAAC # Alternate repeat : CAAGCTTATCAAGAGGGGCGAATGCTAATTCCCAAC # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:55.56%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-1.50,-0.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [53.3-33.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.64,0 Confidence: HIGH] # Array family : NA //