Array 1 33635-32895 **** Predicted by CRISPRDetect 2.4 *** >NZ_RYVK01000002.1 Bifidobacterium pseudolongum subsp. globosum strain 1550B Contig_2, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================ ================== 33634 36 100.0 28 .................................... CGCGCCATCCGCGACTTCTACGCGACGT 33570 36 100.0 28 .................................... TCACGTCGCATATGCGCCGCCCTGGCAC 33506 36 100.0 28 .................................... TAACGTGTTCGTTACTTATTCAGGGTCA 33442 36 100.0 28 .................................... GCAGTGTTGGGCGTAGCATCGTCGATCT 33378 36 100.0 28 .................................... CCATGCCACGCCTCATACGCATCCGGTT 33314 36 100.0 28 .................................... ATACCGTCGAACGACCATTCATGCTCCC 33250 36 100.0 28 .................................... TCAAGATTCATGGACCAAGACCAACCAA 33186 36 97.2 28 ......................A............. TTCCATGTCTTCTGGATGCCGTTCGTGT 33122 36 97.2 28 ......................A............. AATGTCTTCCAATACTCATTGTTTTCGC 33058 36 97.2 28 ......................A............. CGTACAGGGTCGTGTCGTTGTCCGAACC 32994 36 94.4 28 ......................A....G........ CAGTAGACCAGCAGTCGCTCGACTGGAA 32930 36 97.2 0 ......................A............. | ========== ====== ====== ====== ==================================== ============================ ================== 12 36 98.6 28 CAAGTCTATCAAGAAGGTAGGAGGCTAATTCTCAGC # Left flank : TTCCATGATACGAGGGTTGACAATACCGTCGTCGATTATGGATTTTGCGCAGTGCTTCGCTATCTACTGTGAGTCAAAAGAACGCCAATTAGATGTCCCAGTATTTGGAGAAGAACATGAAAAAGGATGAGGAGAGCGGGGGAATGTGGTGCCTTGTGATGTTCGACTTGCCAGTGGGGACTAAAACGGAGAGGAGAGAGGCGACACAATTCAGGAATATGCTGTTGGATATGGGATATATGATGGTGCAATTTTCGATATACGTACGGTATACCCCGACGCAGTCTGGTAATCGTTCAACGGTGAGAATGATAAAAGAGCATTTGCCGGCCGGTGGGAAAGTGCGTATATTGCATATCAGTGATCGACAGTGGGCTAATTCGTTGAGATTTTATAATCAGCATGTCGAAACGAAGAATGAAACACCAGAAGTGTGCACGCTTTTCTGAAGATCTTTTCCTGTAGGGAATGTTGGAAAATCTACCTTCTTGATAGGCTAC # Right flank : GCGCTCGCGATACGCCATGGAGATTTGCAAGTGCTTTCTTACCGTGAACGGTTTGCCCCGCATGCGATAGGACAACTGTTGACGGGAGCTATATCATTATTGCATTCAGGGAAAGAAACGCATTACCGGCATCTATCCATGGAACGAGGGGGTTATCATGCCCAGAGGGACAACGCCCGATGGCCTGTTGCTGAATAAGTTCGTGAAAATCCTTGAAGATCACAAATGGTACAAGGAAGCAGAACTGTTGGATGCCACGTCTATCGCAGGTGAGTTCGCCGCTGGATTCGACTTTGCGATGCTGGCATGCAAAGCTTCTGGTATAGTGCCTCCCACTTATTTGGTGCATGAGATTATGAGCTCACCTTGGTTTGAAAAGGATTCGTACGCCGATGATATTTGCCGAGAGTTCTTGAAGAGGGGCGGATCCTCCGTTACGCCGTGACATGGGCCTGATTCAGTATATCCTCGTCATGGGGAATAGGAGGCCGCATCAAGCA # Questionable array : NO Score: 3.19 # Score Detail : 1:0, 2:0, 3:0, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CAAGTCTATCAAGAAGGTAGGAGGCTAATTCTCAGC # Alternate repeat : CAAGTCTATCAAGAAGGTAGGAAGCTAATTCTCAGC # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:55.56%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [0.00,-3.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [43.3-61.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,1.05 Confidence: HIGH] # Array family : NA //