Array 1 33-488 **** Predicted by CRISPRDetect 2.4 *** >NZ_BBRC01000015.1 Demequina lutea strain NBRC 106155, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 33 29 100.0 32 ............................. TAAGGAGACACCATGAACAACCTCTTGACGCT 94 29 100.0 32 ............................. ATGTAGCGGTGTGCGTTTTGGCACGCGAGGTG 155 29 96.6 32 ............................G TCGGTCATGGCGTTCGGTGTCATCGCACTCTG 216 29 96.6 32 ............................G TCGTTGGTGATGTTGAAGAAGGCACCCTGAAT 277 29 96.6 32 ............................G TGCCACCATTCGCGGTTGGCAACAGGGATAGG 338 29 96.6 32 ..............G.............. ACTCCGGGGAACGTGATCGGGTTGACGATCAG 399 29 100.0 32 ............................. AACGGCGCACCCGCAGGCACCCTTGACGGTGT 460 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================ ================== 8 29 98.3 32 GCCGTCCCCGCGCGAGCGGGGGTGATCCC # Left flank : AGGTCGAGCATTGGGTCTTTGAGCATTGTGTCG # Right flank : CGACAATAACTGGCTCTTCACTATGGATCTCGTGGACCGGTTGGTCTGGCTCTTTGATGGACGTGGCGGCTTCGGCCCGTTGGACGCAGGATGGTCTGGTGGGTGGGTCTGACTCACGGCTCTTGTGACGTCACCGGTTGGTGGCTGTCCTGCTTGCGACGTGTCGACCGGCTCGGCTCACTTTCGAAGTGCAGCCCGGTGGGCCGTGATGTCCTGATAGGAGTCTGGCGAGTCCCCGATAGTGAACTGACTGACGCCCGGCCGGGCTGCGCACCCGACAATACGGAAGGGCGCGGTTCCTATGGTGAACGACAATCAGATCGAGGTCTACGGCGGGATTGACACGCACGCAGATACACATCATGTCGCGGTGATCGATGCCGCTGGGCGGAGGTTGGCCGATGTCCAGGTGCCAACCACCGCAGCTGGCTATCAGGCGGCGTTACGGTTCCTGGGTTCGTGGCCCACGCTGGCAAGCGTGGGTATCGAGTGCACCGGCT # Questionable array : NO Score: 6.15 # Score Detail : 1:0, 2:3, 3:0, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.98, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCCGTCCCCGCGCGAGCGGGGGTGATCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [2,3] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGCTCCCCGCGCGAGCGGGGATGATCCC with 96% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.80,-12.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [26.7-48.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.64 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 34103-34436 **** Predicted by CRISPRDetect 2.4 *** >NZ_BBRC01000019.1 Demequina lutea strain NBRC 106155, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 34103 29 100.0 32 ............................. ACGAGCGTGTCTCCCACGGACCACTTTGTTGC 34164 29 96.6 32 ............................G AAGGCCACGTCCGCAACGACTGCACAGGTGTC 34225 29 100.0 32 ............................. ACCAGCCCCGCCGCCCTGGCGTGTCTGAAAAC 34286 29 100.0 32 ............................. ATCAAGCAGTCATACAACCAAGCTTTGCACCA 34347 29 100.0 32 ............................. GTGCCATACGTCGTCTCGGCGACGTAGCCAAC 34408 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================ ================== 6 29 99.4 32 GCCGTCCCCGCGCGAGCGGGGGTGATCCC # Left flank : CAACTACGACGACCTCGACTGGTAATCGCGTGGTCGTCATCGTTCTGACCGCGTGCCCCGCAGGCCTACGTGGATACCTCACGCGATGGTTCCTCGAGGTGTCGCCCGGCGTCTTCGTCGGGCGCATACCGGCGCGGGTTCGTGATCGGGCTTGGGAGAGAATCATCGAGATGATCGGTCGTGGCCGTGCTCTCCTTGTCTACTCGGCGCAAGGTGAGCAAGGCCTGGCCTTCCGCACCTACGGTCACGACTGGAAGCCGGTCGACTTCGACGGGATCCAACTCATAATGAGGCGCGCGACCGGCGACGGACCCAGCGCCATCCCGGACGCGCCAATGACGCCGGAGGTGGGCGGTAAGTCGAACGTAGCCGCAGGTTGGAGCTCAACTGCGCGCCGGAGGAAGTTCGCCCGGTCGAGGTCCAGACCTGGCTAGCGCCGCGGGCGGTGGGAAGTGAAGGGCGAGACGACTATTGCGTAGGATCGACGCAGGTCAGGAAGT # Right flank : AACGGGCACCGCACTAGCACCCTGGCGTCGACG # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCCGTCCCCGCGCGAGCGGGGGTGATCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [3,3] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGCTCCCCGCGCGAGCGGGGATGATCCC with 96% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.80,-12.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [1-1] Score: 0/0.41 # AT richness analysis in flanks prediction: F [40.0-15.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.14,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //