Array 1 6956-7514 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP012103.1 Bacillus thuringiensis strain HS18-1 plasmid pHS18-4, complete sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ =================================================================================================== ================== 6956 32 100.0 35 ................................ TATAAAGATAGTATCATAACTTAAAAAAAACGTAA 7023 32 100.0 34 ................................ TTTATTAAATACCCCTTGAGATCCGAAGCCATTT 7089 32 90.6 34 .........A....T...A............. TATGAATGATGAAATTTTTGAAAAAACAGGTGAG 7155 32 96.9 35 ......T......................... GGGAATATGCCACCTATTAATGATATGGGTGGAGT 7222 32 93.8 33 .........A....T................. TTTGAAGCGGCTGTTGAGAAGTATCCAACTAAT 7287 32 84.4 34 ........C...G.G....T.......A.... GTATCTATGTAGACCCTACACAATTAGATTGAAT 7353 31 75.0 99 .........T..G.T..-.GA..A......T. CAGTGTTGCTACGCTTAGTGGGCATCCCTAGATTCTCTTCACTCTTGCTGGGGCGCGGATTGAAATGCTTCAAACCAACGTAACTTTTGCCTTAGATCT 7483 32 96.9 0 ............G................... | ========== ====== ====== ====== ================================ =================================================================================================== ================== 8 32 92.2 44 GTCGCACCTCTTATAGGTGCGGGGATTGAAAT # Left flank : GATTGAAATAACCAATCGAATATAAACGTGGGAAACCGAAAATAAACGATTCGGATGTTTTACAATTAACAGCACAAGCTATATGTCTTGAAGAAATGCTGCGGAAAGTATCAAAAACATGTCAAAATTATGGTCAACGAGTTCAAAATTCTGTATTTGAATGTGTTGTGGATGCAACTCAATTTGCTACTTTAAAAATGGAATTAATTAAGATTATTGACGAGAATGAGGATAGTCTCAGATTTTATCAGTTAGGTAATAACTATAAAAATAGAGTTGAGCATATTGGCATAAAAGAATCAATTGATTTAGAAAGCCCTTTAATTTTTTAGGTGCGAACGTATAGCACACATGAAATTCCCCATACATTCGCACCTGAATTTTCATAATTTATGAATAGAATTTGTGATTTTCCATACAAATTTCTTTATACAATTAAAAAATTGCATACTTTTGAAACAAATTAACGTATTTGTATATGATTTTGAATACAAATCGGT # Right flank : TCGACCTAAAACAGATGGAACTATTACAGATATTCGTCGCACCTCTCATTGGTATATATTCAACGATTCCAAAATTCATTATTCGATTTACTTTTTTAGGTGCGAATGTATAGCACACATGAACCCCCTCGTACATTTGCACCTAAATTTTCATACTTTTGAACAGTAATAACGTATCCGTTTATGATTTTGAATGCAAATCGAGGGCGCACTTTTTTAGTGCCAGGATCAAAATAACTCAACCAAGAATCACATAACTCTTAAACAAGTCGCACCTCCTATAGGTGCGGGGATTGAAATCCGAAAACTCGGAAGGAGTCTCAACTAAAACGGAGTCGCACTTCTTGTAGGTGCATGGATTGAAATCACATTGTAACAGACAAGGCAGTTCCGGTTAATAGTCGCACCTCTTGTAGGTGCGGGGATTGAAATAAGTAAATAAGGCGAGCGCGCTCGCCTAGGGAACGTCGCACCTCCTATAGGTGCGGGGATTGAAATTT # Questionable array : NO Score: 7.49 # Score Detail : 1:0, 2:3, 3:3, 4:0.61, 5:0, 6:0.25, 7:-0.84, 8:1, 9:0.47, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACCTCTTATAGGTGCGGGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: R [7,9] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGCACCTCATATAGGTGCGTGGATTGAAAT with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-2.90,-2.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [3-16] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [76.7-61.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [10.05,0.37 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //