Array 1 1330932-1329181 **** Predicted by CRISPRDetect 2.4 *** >NZ_UHFQ01000002.1 Streptococcus mutans strain NCTC10923, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =============================== ================== 1330931 36 100.0 30 .................................... CCCCTTAATAGAAGCACGTTTTAAACGTTC 1330865 36 100.0 30 .................................... GCAATTCAGTTTCATCCCATGGGAGCAACA 1330799 36 100.0 30 .................................... TCTTGTGCAAAAACAAGCAGAAGCGTCCTC 1330733 36 100.0 30 .................................... GATAAACTTGACCAAGTAATTGGTCTTCTA 1330667 36 100.0 30 .................................... GTGAATTTAAGATTGGCAGTCAGACACCAG 1330601 36 100.0 30 .................................... AGTCTATGATGTGCCTTCTGATTTTGTTGG 1330535 36 100.0 30 .................................... TCCGCTGAGAAAGCTTATTAAAGGTCAAGT 1330469 36 100.0 29 .................................... GCTAGACGGGTTTAATAAGCACGGTTTAG 1330404 36 100.0 30 .................................... TCCCAACTCATGACTAGTAACTTTCGCATA 1330338 36 100.0 30 .................................... TCCGCTGAGAAAGCTTATTAAAGGTCAAGT 1330272 36 100.0 29 .................................... GCTAGACGGGTTTAATAAGCACGGTTTAG 1330207 36 100.0 31 .................................... CTAACAATTGATGACGACCCGATTTTAAAAA 1330140 36 100.0 30 .................................... ATCGAGCAAGTCAATAGCATTTCCGCTAAT 1330074 36 100.0 30 .................................... CAATTCGTCAAATTCTCCACCAAGAAGTGC 1330008 36 100.0 30 .................................... ACTGCAGATCAACATTTGTAAACGGAATCT 1329942 36 100.0 30 .................................... ATTCGCAGTGACTCTATGGAAATGGATACT 1329876 36 100.0 30 .................................... AAGTGTTCTTTGCATAAAATCGGGCAGTTC 1329810 36 100.0 30 .................................... AGAACTTCAAGCCAAAATCGAAGAGGTATT 1329744 36 100.0 30 .................................... CAGCACGCGCCAAGAAAGTCAAAAATGACA 1329678 36 100.0 30 .................................... ACCCTACAAATTCATTGGTTCAAAGCCTGA 1329612 36 100.0 30 .................................... AAAGGACATGCTGATACTGTGGCACCTGTT 1329546 36 100.0 30 .................................... CATTGAGTCAACTGGCGGGTTTTATCTTAA 1329480 36 100.0 30 .................................... GATAAAGATGAATACAAAGACCCAAACACT 1329414 36 100.0 30 .................................... GATAAAGATGAATACAAAGACCCAAACACT 1329348 36 100.0 30 .................................... TATCTTTTGGCGGAATGAAATCTATTGTAT 1329282 36 100.0 30 .................................... AATAGAATCAAATTCTCCTAAGTCAGTTAA 1329216 35 75.0 0 ..........CA.......A.TG..T-.A.T..... | A [1329201] ========== ====== ====== ====== ==================================== =============================== ================== 27 36 99.1 30 GTTTTAGAGCTGTGTTGTTTCGAATGGTTCCAAAAC # Left flank : AGGAAGAGGAAGGATATTGGGTTGAATTTCCTGAATTTGGCGGTGGTACGCAAGGGGAAGATTTGGAAGAAGCCATGAAGAACGCTCGTCAGATGTTAGAAAGTGTATTGGCCTCCTATCTAGATGAGGGAATGAAACTGCCTAATCCAAGTGAGATAAGGAAACTATCTGTTGAAGATGGCTTTGCAACTATGATTCAAGCAGATCCTAATCCTTATCTCAAAAATAACAAAGCTATTCGAAAGAATGTTACCGTACCTGAGTGGCTAGTACAATTAGCAGATCGTGATCAAGTGAATTATTCTGAAGTATTAACAAAAGCTTTGGAAAGGAAACTACAATTATAAAACAAGAAAATCGCTAGAAAGATTGATTTCTAGCGATTTTTTAGGTATAATATCAGCAATCAAAATCTTTTAAAAAGGAATTATTTGAAGCTGAATTCTAGCTGAGATGAATGGCGCGATTACGAAATGTCGTGACGAAAATTGGTCCACGAG # Right flank : GCATTATGCGAAAGATTTTTAAATAAGCAAAAGACACTTGAAGCAATAATTCAAGTGTCTTTTATGGGACTTTCTTTAATTTTTAGGTAATGACCGTTCCGATGACTTCAATTGTATCATCTTCTTTTAAAATGATGTCATCATAATCTGGATTTAATGAGATGAGTCGAATTTCTTTGTTTTTTCGGTAGAGTTTTTTGACATATGCCTCATTATTTACAATAACAACGATAATTTGTCCGTGATGGATAGCTTTAGTCTTTTTAACAAAAATAACGTCACCGTTGTAAAATAAAGGTTCCATACTATTACCATTGACAGTAAGAGCAATATCATGTTCTGGAATTGGTATTGGGTATTTAATGGTTTCTTGTTTTTCATGTCCAACCCAGATACCAGTACCAGCTGAAACTTCACCATAAATCTGAATGTTTTCGTATTGACGTCCAAAGGTTTGATACAAATCCTTAGCTTTTATCACATTATCCCAATGAATAATT # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGAGCTGTGTTGTTTCGAATGGTTCCAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:61.11%AT] # Reference repeat match prediction: R [matched GTTTTAGAGCTGTGTTGTTTCGAATGGTTCCAAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [0.00,-4.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [10-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [70.0-55.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,5.28 Confidence: HIGH] # Array family : II-A/C [Matched known repeat from this family], //