Array 1 246950-249824 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACFRO010000003.1 Lactobacillus sp. M0398 NODE_3_length_285121_cov_334.286125, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =============================== ================== 246950 36 100.0 30 .................................... TTAGCAGATACTTAAATTGTTCTTTAGTGA 247016 36 100.0 30 .................................... AAGGTAGGTTGTCTCGCTGGGAAAATAATA 247082 36 100.0 30 .................................... AAGTTTACATGGGAGTTATGCGCAATATTG 247148 36 100.0 30 .................................... AATAGTATTGCTCCCACAACACACATACTC 247214 36 100.0 30 .................................... TTTCCATTTCTTTTCTAAATGTTTCTTTAT 247280 36 100.0 30 .................................... TCAAAAACCCACAAACAGGCACAATGTTTA 247346 36 100.0 30 .................................... CAGCACTTAAGCTACCTCTTCTTTGTTTAG 247412 36 100.0 30 .................................... ACATCTGGGTTTGCGGATTATCACCATCAA 247478 36 100.0 30 .................................... CTAAAAAGCCGCCTAAAAAGTTCTGGTCAT 247544 36 100.0 30 .................................... GAAGCATGGTTTAGCATTAGCACACCGTCA 247610 36 100.0 30 .................................... CGATAATTAGATATTATGTTGATCGGTTAG 247676 36 100.0 30 .................................... CAGCTGAAGGAATGATTGAGAAAGCTTACC 247742 36 100.0 30 .................................... CCAAAATTAGAGCTATTGATCGATTTGATG 247808 36 100.0 30 .................................... TTGTGTTAATAATGAAAAAATATCAGAGTT 247874 36 100.0 30 .................................... TTTTCGGAGCCGTTGTCAGTTTCTTAAATA 247940 36 100.0 30 .................................... TAACTGGCCAGAAGTTTTCTTTGTGTACCT 248006 36 100.0 30 .................................... CTTTACGCTAATAAATAGAGGCAAAGCAAA 248072 36 100.0 30 .................................... TATAATAGCGCCCTACCGTACCTTTCTTGC 248138 36 100.0 30 .................................... TTAACATATTTAGGTATAACTTATCTGGCA 248204 36 100.0 30 .................................... GATCAATTAAGTTTGGAGTATGTACAATGA 248270 36 100.0 30 .................................... ACTTGTTTTAATTGATATTCTTCTTCTTCA 248336 36 100.0 30 .................................... ATAATCGTGTGAGATTGCAACAAGACGCAG 248402 36 100.0 30 .................................... CTATAATATCATGCTCGTAATGATCAATAA 248468 36 100.0 30 .................................... GCCAAACGTAAAGCTAGGTCTAAACATATA 248534 36 100.0 30 .................................... AATAATAATATTGAATGTTTTAGTGACATT 248600 36 100.0 30 .................................... ACTATAATGAAGAAGAAAATTATGACCTAA 248666 36 100.0 30 .................................... AGCTACAACCATTACCGCAACTAATTTTTT 248732 36 100.0 30 .................................... GCGCAGGTGCTATTATGGGTAAAATGACTG 248798 36 100.0 30 .................................... TGGAAGTATTAGGAAATGCTGCGATATCCT 248864 36 100.0 30 .................................... TGAAACATTAAGAGCTCGAGTAATTTACGA 248930 36 100.0 31 .................................... TTAAGAAAAACATTGCACAGACGGACATGGT 248997 36 100.0 30 .................................... AATACTTTGCACAAAGTGCGTTAGCTACTA 249063 36 100.0 30 .................................... TGCAGGCTAATCAAAACTCACCTTTTCAAA 249129 36 100.0 30 .................................... TCAGTAACTGTATATAATAAAGATTATGAA 249195 36 100.0 30 .................................... AATTCCCGGTTAGGAATAAACTTCTGCCCT 249261 36 100.0 30 .................................... TCAAAAATGAACAATTTAGAAACCATTTTA 249327 36 100.0 30 .................................... AAACCTGAAACCTGTGTTAACATTTTCCAC 249393 36 100.0 30 .................................... TTGAACTTAGTGAATAATTTAGTTTTTGTA 249459 36 100.0 30 .................................... TGAATGATTTATCGGAAACATTAGCTCACA 249525 36 100.0 30 .................................... GCGAGCGCGGCTATCATATCTATGACAACT 249591 36 100.0 30 .................................... ATATAATCCAATCGACCCAGACAACATCAC 249657 36 100.0 30 .................................... ACTTACTTATTGTTTTCAAACTCATCATCA 249723 36 100.0 30 .................................... AAACATGACTTTGAAAAATTGGTTTACCTT 249789 36 88.9 0 ....................T...AG........G. | ========== ====== ====== ====== ==================================== =============================== ================== 44 36 99.7 30 GTTTTAGATGATTGTTAGATCAATGATGATTAGAAC # Left flank : AGTGGTGATATTACCAAAAAGTATATGCCTCATATTGTAAGTAGTTACCTAAAAAATTTAGATGAAGAGAATCGTAATAAGGTGATGAAGTCTTTTTATAATCTAGAGTCAACCTTGCAGGACTCACTTTTACTTGAAGATTTACCCTTAGCAATTAATTTTGATGAAGACTTAAAAAAACTACTTAAGTTCACGGAAATTCATTTTGATAAATCAATGTTGTTTAGTATATATGGTACAATAGAAACAGTTTTAAAAATTCACCAGATGTGTAATTTAAAATCTGTTCCTGTTATCTGTAATGTAGCTCATTACTTGGAAGAACAGGAGTGGCAAGAGTTAGCTAGTCTTGTTACGGAAATGAATTTAATTTTGATTGTAATTGAATTCACGACGAAAGAAAATTTGGCAATATCTAAAGACATACCTTTTTATTATATTGATAAAGATCTAATCGATTGGTACTAGCAACAATATTAAAATCAGATTATAAAACATCG # Right flank : CATAATTAATTGGGTTAAGGAAAGAGCAATTTAAAATGAAAAAGTCAGTCAAATTAAAGAAATAAGGCAATTCTAGGGCGGCTATTATTCCTAGAAAAGTGCTGAAAGAAATAAACCCAGATGAGCTATTTACAGAGTTTGCAATAGACTTCGATAAAGATAAGCAGTCTATTACGCTAAAAAATTGAAAGCCAAATATAATTTCTTTAATAAAGTAATTGCGCAATATATTACGTTACTATAACAAAGAAAGAATTAAGGAAAAACTGAATGACTGAGTCCGAGAGAATATCTAGCTCATGCCTTAAAGAAATGACATTGACTTTTGGTTACTCAGTACATACTACTTTTAATACTTTAAGAAATTGACACTAATAAAGAAGGGTTACTATTTGTTCAAATGCAAAACATACTAAAAAGTAACAACAACAAACTATACCTTTTGTCAGTGATCACCGATAACTTGGGCAGCTCTTTAATGTCATTTGCATTGCCGTTGA # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGATGATTGTTAGATCAATGATGATTAGAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:72.22%AT] # Reference repeat match prediction: F [matched GTTTTAGATGATTGTTAGATCAATGATGATTAGAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-2.90,-1.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [73.3-76.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : II-A [Matched known repeat from this family], //