Array 1 16906-18039 **** Predicted by CRISPRDetect 2.4 *** >NZ_AQOR01000052.1 Alcanivorax sp. S71-1-4 contig52, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ===================================== ================== 16906 29 100.0 32 ............................. GTGGACCAGCTGGTCGACCAGGTGCATCGAGG 16967 29 100.0 32 ............................. GCGTTGCTTGGCCAACGTCTCAGCATTCTGGG 17028 29 100.0 32 ............................. CAGGAGCTGCCGGTGGGCATGACCCACGAGCG 17089 29 100.0 32 ............................. CTGTGAGCGATCAATGACGCCCCAGTCATCAA 17150 29 100.0 32 ............................. CAGGAGCTGTCGGTGGGCATGACCCACGAGCG 17211 29 100.0 32 ............................. CAGAAGGACGAGAGCGTGCGTGCCTTCCTGGC 17272 29 100.0 37 ............................. CAGAAGGACGGCGAGCGTTGTGCAGCAGCTGGGTGCT 17338 29 100.0 32 ............................. TTTTCTGAACAGATCGAATTGTTCAATGACTG 17399 29 100.0 32 ............................. GCGTGGCGGCTCGATTACTCACTTTCCCCGGA 17460 29 100.0 32 ............................. CAACGGAGCACCAGTCAGAGATGTCGAACGAC 17521 29 100.0 32 ............................. ACAACAACGTCATCACGATACCATGCTCTTCA 17582 29 100.0 33 ............................. TTTGAGCGCCAAGAGCATATAGCGGATGGATGC 17644 29 100.0 32 ............................. ACCCGGTACCCTTTGGCCTTGAGCACGGCGCC 17705 29 100.0 33 ............................. TTCACCCCGAGATGGCGTGGCGCCTGAACGCCA 17767 29 100.0 32 ............................. TGCTGGATGAGATCGTGTGCAGCGGGCAGATA 17828 29 100.0 32 ............................. GGACATGCGGGAGTACCTCATTATTAATGACA 17889 29 100.0 32 ............................. TCCGAAGAACACCTGGGAGAGGTATTTGCGTG 17950 29 100.0 32 ............................. CCGTCGCTGCATAACCGTTTAGCCCAGCCGCC 18011 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ===================================== ================== 19 29 100.0 32 GTGTTCCCCGCAGGTGCGGGGATGAACCG # Left flank : TACTAGGCCGTATTATCCCGATCATTGAGGAAGTGCTATCCGCTGGCGGTATATCACCTCCCGAGGCACCGCCGGAATCAGTGCCCCCCGCTATTCCAAATCCAGATACACACGGCGAGCAGGGGCACAGGAGCCACTGATGGCGTTCCTCGTGGTAGTCACCGAAAGTGTTCCTCCTCGTCTGCGCGGCAGGTTGGCTATCTGGCTGTTAGAGGTACGAGCCGGTATTTATATAGGCGATGTATCCCGGCGTACCCGCGAAATGATCTGGCAGCAACTCGAAGCGGGCCATGAGAGCGGCAACGTGGTCATGGCTTGGGCTAGTAATTCGGAGTCCGGCTACGACTTCCAGACGCTCGGGACTAATCGTCGGGAGCCTATTGATTACGACGGTTTGCGCCTGGTCGCTTTTATCCCACACGACTCCTCAGACTGAAGTTGAAACTGGTGGATTTGAAACCCTTGTTTTTGTTTTTTTAAAACAGTGAGTTACATTTGGT # Right flank : AACTCAACGGCCTCGACACCCCGTTCTGACGGAGTGTAGTGGTCTACTAAAACCG # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCAGGTGCGGGGATGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCAGGTGCGGGGATGAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [68.3-41.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.14,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 13949-13736 **** Predicted by CRISPRDetect 2.4 *** >NZ_AQOR01000059.1 Alcanivorax sp. S71-1-4 contig59, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 13948 29 100.0 32 ............................. CCTAGCAGAATATGCAAGGGCTTTGCAGATGA 13887 29 100.0 32 ............................. GCTGCGAGGAATCGCCAACAGCGCCAGCTGGC 13826 29 100.0 32 ............................. GGTGCCCTTTCAGATGGTGCGGATCGCACGGG 13765 29 75.9 0 ............T...A.....CA..AAA | T [13742] ========== ====== ====== ====== ============================= ================================ ================== 4 29 94.0 32 GTGTTCCCCGCAGGTGCGGGGATGAACCG # Left flank : GCAGGTGCGGGGATGAACCGATGGGCGTGCCCGATTACAACGTGATCATCAG # Right flank : CTCAGGCCACCAGTGTCAGAACCTGCTCAGTAATTTCTCTGCCGAGGAAGCTTGCCTTCTACACTTTGAAGGTAGTGGTTTCTGCGGGATTTAGTTAAACAAATAACTACGCAGCTTATTCTCGGGTTCGTCAGTTAGATTCTTGTCGATACACAGTTCTACCCGCTGGCTCAACTGCTCCCTCAGTGTATGCCGCAACACCCCCAGCATCGCCGGGGGTGCAATCAGCACCAGTTTCTCGAACTTACCTTTATGGCGCCCTTTATCTAACACATCAAAAATATGCCGGGAGAAGGCAATTTGTTGCTGTTCGCGCACGTCGGGTAGTTCCATTGCGCTGCGTGCTTCGCTGGCGCTTTCGAACATACGGCCGGGCCGGTCGCTGTAGATGTCCTGCTCGCGCAGGCGGGCTTCCGGAAAGCTCAGTTCGGTGACGGGTGTGAGTGGCTGGACGCGATTGCAGGCGTAGAAGATACGAGCGTGGGTACTGTCGGCGACGA # Questionable array : NO Score: 5.56 # Score Detail : 1:0, 2:3, 3:0, 4:0.70, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCAGGTGCGGGGATGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCAGGTGCGGGGATGAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.10,-12.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [8-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [46.7-35.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.64,5.28 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //