Array 1 2319434-2318012 		**** Predicted by CRISPRDetect 2.4 *** 
>NC_017474.1 Lacticaseibacillus paracasei, complete sequence		Array_Orientation: Reverse

  Position	Repeat	   %id	Spacer	Repeat_Sequence                     	Spacer_Sequence               	Insertion/Deletion
==========	======	======	======	====================================	==============================	==================
   2319433	    36	 100.0	    30	....................................	TGTTTTCTCCAGAACAACAGCTTAGACGGC	
   2319367	    36	 100.0	    30	....................................	TGACATTGTGGGTATGCAACAAATCACCCC	
   2319301	    36	 100.0	    30	....................................	GAAACTTGACAAAAACAATCTTATCTACTG	
   2319235	    36	 100.0	    30	....................................	GAATATCATAATGCGGACGACCCATTACCA	
   2319169	    36	 100.0	    30	....................................	AAAAGCCGGTGCAATATGCACCGGCTCACT	
   2319103	    36	 100.0	    30	....................................	GCACTGATGAAACCGCACAACAGTTGACCG	
   2319037	    36	 100.0	    30	....................................	GATCGCGGCACGATTGTAAACGAAGAAACC	
   2318971	    36	 100.0	    30	....................................	CCAAATTGGTTAGCACCGCTTAAAGACGAA	
   2318905	    36	 100.0	    30	....................................	TATCAGAGGCTTATCCATTAAACAACTGGC	
   2318839	    36	 100.0	    30	....................................	AAACTGCCTTCCGTTGCGATCAACTCGCGC	
   2318773	    36	 100.0	    30	....................................	AAGCGTTCGCTTGCGCTGGTGTTGGTCTCG	
   2318707	    36	 100.0	    30	....................................	TCGTAGCGGCTAACACGCTTATGGCTGACA	
   2318641	    36	 100.0	    30	....................................	AAAATATTTCTAGAATTAGCAACTTTATGG	
   2318575	    36	 100.0	    30	....................................	GATCGTTGAAGAAAGGCTGATCAATATGTT	
   2318509	    36	 100.0	    30	....................................	CGCAAAAAATGTTTTGACAAGAACACATCG	
   2318443	    36	 100.0	    30	....................................	GGCCAATATCATCAGTCGGGAGATTGTCGC	
   2318377	    36	 100.0	    30	....................................	ACTCGTCAATATCCTTCTGCATGATCAAGT	
   2318311	    36	 100.0	    30	....................................	GCAATCGCGATACTTTCACCGATTGCAACA	
   2318245	    36	 100.0	    30	....................................	AACAAAATAATAGGAGGTTTTTACCATGGA	
   2318179	    36	 100.0	    30	....................................	ATGACTTTAACAATCAAATCCCAAGTTGTT	
   2318113	    36	 100.0	    30	....................................	TATTATCCTAACACATCCATCGAGAAGTTA	
   2318047	    36	 100.0	     0	....................................	|                             	
==========	======	======	======	====================================	==============================	==================
        22	    36	 100.0	    30	GTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGC	                              	       

# Left flank :   AGCTTGATCTAGATAAACTTTTTCAACGTCTAATCTATAAGAGGATGGAGTTGTTGATTGAGAATCAGCGGCTTGTCGAACTGATCGATCAATCGCAACAAATGGCGATGTATTTACTTCAAGATCCATTTTTGAGCGACTTGCCAGTCACGGTTGAACCAGGCGGTAAGCTTGAACAAATCATGAAATACTGCAACGTTCATTTTGATGAGGCTGTCACGACAGAGTCAACCTCGAAGATTGAGGCGCTTATTCAGACGTTAACTAAATTGGAGGAAAAGAAACTTGTCATTCTTACAAATGTTAGTCATTATTTAAGTGCCAGAGACTTTTCGTCGGTGACTGAACAGATCGGTGATACTGAACTTCAAGTCGTTCTCATCGAATTCTCAAAGGTGAACAGAAAGAAGTACTTTGAGAAATGCCAGTATATCTATATTGACGAGGACTTCGTTGACAATCGCGAACTAGATTGATTAGGAGATTGTGTGAAAACACAG
# Right flank :  TGAATATTCTAATGTTGTTGGATTGAAGTCAATATTTGAGACAGATTTTAAGAGACATTCAGAACCGCGTTTACCTTCCACAGCTCAAATAAATCATCAATTGCGATTAATAACTTATTTGAACCCTGGAAAGCATTAAGTCAGGCGGCCATTTGGCTCGTAAGTGTTGCAATTTCAACTTGTAAGGGGGTCTGGTAGCCCAGTGAACTATGAATTCTCTTCCTATTGTAGAAAGCATGCACATATTCAAAAAGGACGGCAGCGGCAGTTTCATAATCTTCAAAGACCGGCACTGGATAAACACATTCCTTTTTGAGGGAAGCGTGAAAGGATTCCATTGGCGCATTATCATACGGACAACCCTTACGGCTGTATGAGTGGCGGATATGTAGTTCAGTTAAACGTTGATTGTAATCATCGCTGGTATACTGTGATCCTAAATCCGTATGGATAATCAGGTCCCCAGTAATGGTTCGATTTTTAACCGCGCTTTCAAGGGC

# Questionable array : NO	 Score: 6.26
# 	Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGC
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:55.56%AT]
# 	Reference repeat match prediction:         R [matched GTCTCAGGTAGATGTCAGATCAATCAGTTCAAGAGC with 95% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  R [0.00,-2.50] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      NA [0-0] Score: 0/0.41
# 	AT richness analysis in flanks prediction: F [71.7-56.7]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         R [0.27,4.87   Confidence: HIGH] 

# Array family : II-A/C [Matched known repeat from this family],   
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