Array 1 2752964-2752656 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP072032.1 Akkermansia muciniphila strain Akk1613 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ====================================== ================== 2752963 33 87.9 38 A.T.....A.A...................... TTCTTCTTCTTCTTCTTCACTGGAAGATTCAATATTCA TG,G [2752954,2752958] 2752889 33 100.0 33 ................................. AGCGCGGTTGACAGCGTGAAAGCGTGCACTGGG 2752823 33 100.0 35 ................................. GAATTCAAGAGTGCAATTAGTCATCCGGCAACCCG 2752755 33 97.0 34 ....T............................ CAGCAACGCGTCCATGTTATTTCCCCTCCCGTTT 2752688 33 97.0 0 ................................A | ========== ====== ====== ====== ================================= ====================================== ================== 5 33 96.4 35 GTCGCACTCCGCAAGGAGTGCGTGGATTGAAAC # Left flank : TGGCGGCGGGTACGGAAGGCTTCGGCAGCTGCTGCGACGGCCGGATCATGTGCGGCCTGTGCTACGGGTTCACGGGTTCCGCGTTGCGCCGCATGCTGGCAGTTCTGGACCGTCTGCCCATTGGGGGTGACGATCCGGAGGATATAGCAACGGGACGCTTGGCCATGGCCGCAGGGGTTCCGCTTCACATAGAGCGGCCCTGGGCGGCATCACGGCCGGAGGGGCGCTGGGCGGCCTACCGCTGGCCAACGATGCCGGCAGTAGCCAAATATGATCGGCTGGACGTGGTGACGCTGGGCACTCTTCACATGCCCCGGCAGCAGATGGACGCAGCAGAGTTCATCCGCGTATTTGACGAGTTGGCCGCCAGGGACGTGATCGGGGAGTAGAGGGCAGTTCAAGCCGTTTTCAAGGGAGGTGCAACCAGGTTGCAATGGGGATGCAGCGGACAGACGTTCAAGGGCGTTTTTCCACAATGCTTGATAATTTTTCTACAAAGC # Right flank : AGAAAAAGCTCTCCGAGCTTGTTTGGTCTAGAGAGCTTTTTTGTTCCATCATCTTGTTAAGTTGTCAGGAAGAGGGGTGATTATTGAGATTGAGTTCTGCCGGGGGGAGGGACTGGAGCAGAGCCAGGATGGGGTCCTGTGGTGCAGCGCCCATTTCCCGCTGGCGTTTGAATTCCTCCTCTTCCTGCTGCAGGGCTGCCAGTTTGGTGTCTTCCACCAGCGCCTTGAATTTGTCCGCCTGAGAGTATTCCCCGTCCTCGTCCCGGAAAACGCGGGCCAACCAGCGGCGTTTTTCTTCCGTACTGAGCAGGGGATTTTTCATGTGCCGGGGAATGTATTTTTGTCCAGCAGGTTTCCGGCAAGCTGTTCTCCATCCGCAGTGGGCCGGTAAACATAAGGGCGACCGTCTCCAATACGGTTGACATATCCCTGCGCAATGAGATCCTGCAGGATATTGGTGACGGTATTAGGGTGCAGGCGTGTGGCTTCCGTAATGGTGC # Questionable array : NO Score: 8.79 # Score Detail : 1:0, 2:3, 3:3, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACTCCGCAAGGAGTGCGTGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: R [6,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGCTCTCCGCAAGGAGGGCGTGGATTGAAAC with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-5.90,-7.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [61.7-61.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,10.15 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 2 2785336-2784980 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP072032.1 Akkermansia muciniphila strain Akk1613 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================== =================================== ================== 2785335 31 100.0 34 ............................... GCCCCGCGATGAAAATCGTGTGGGATATGGGCCG 2785270 31 100.0 33 ............................... TTCCCGAAGAGAGCCGGATGCCGGGGTAGTGCG 2785206 31 100.0 34 ............................... ATCAGTTCGACGATTGCCACGGCTATATCCAGCA 2785141 31 100.0 35 ............................... TCTTGCCCTGCGGAAGTTTGGCGTTAAGGGCATCA 2785075 31 100.0 34 ............................... CTGTACGAGGAAGCCGACCGTTTCAAGGACTTCC 2785010 31 100.0 0 ............................... | ========== ====== ====== ====== =============================== =================================== ================== 6 31 100.0 34 GTCGCACTCTCACGAGTGCGTGGATTGAAAC # Left flank : GCCGTAAAAATTCCGTTGATGGCCTGTCTGGCCTCCGCTGTCTCCGCGGCGTTGGTATGGCTGTTGAGCCTGAACAGGTGGACGCGCAAAAGCATCATGTAAACCGCAGATATTTTTCGCAGGTCGCTTCGGGGACACGGCAGTACCGGGATGTCTCTTCTTTTGTGGAAAAGAGAATGAAACGGTTTCCGGGGAGAGGCCTGCAAAATTCTGGACGGGAAAGAGGGAACAGGCTAGGATGTCCCAGCATCGTGTACAGGCCTAGGTTGCCGGAGATGCGGGCTTTTTAACGCATGAAAAGCTCCTTTCCCGGTCTCCCTTCCGCCGACCCCAAGCTCACAGAAAATTCCCGGGACACCGGCGATTTTCGTAATCCGTTGGGGTTCTAATCTTGACAACTATCATCTCTTTTTCACGGCCTGGAATCTTTGTACCTCCCATGGGAGGTTGGCGCAAAACACCCGTTGCACTGTTGATAATCAAACCATAGACGTTCAGGA # Right flank : CCGTCGTCGGTGGCGAAAGCGTAATCAAGGATGAGTCGCACTCTCATGATCTTTATCAATGAAGGGTGGAAAGGGGTGAATTTAGGGTGAATAGGGGTGAACGCTAGGAAAATCAAGGGGAGCAAGCATTGAGTGATCAGAGAAAGACTGTGTAGAAAATATCGGCGTCAGAAGAGGAAATTATCAAGCATCGTGGAAAATAATCATGGTAAGATGTCCCGCATGTGTACACCTGCATATTGCATCCCCTTGTATGGCTCCATGACTGTTATCTCGCCCGAAGACCGAAGGAAAAAGAATCCGCAAATTTATCATCTCCATGATACCGCTGTCGTGTTGATGTGGACAACCCGTGAAAGAAGAAAGACGACATGCTGGGTGCGGGATGTGCTCGACAACGTGTGGATTGTGATCAGGAACGAAAGAGAAGATGATTGAAAAAGGCCGCCAGGAACAACCTGACGGCCTGAATTGTATCTGCCCATTGGGCTAATCATCGC # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACTCTCACGAGTGCGTGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [7,7] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGCACCCTCACGGGTGCGTGGATTGAAAC with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-3.80,-4.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [51.7-51.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,9.37 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //