Array 1 182238-184887 **** Predicted by CRISPRDetect 2.4 *** >NZ_UJSU01000004.1 Klebsiella pneumoniae strain EuSCAPE_TR026, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 182238 29 100.0 32 ............................. GAGCAGGCACCCGCCGCAACGACGAAGAGCGC 182299 29 100.0 32 ............................. AAATCAGCCAGCACCACGATTCTGGGAAATTT 182360 29 100.0 32 ............................. ACAGGCTTACCCGTATTGAGACGGTTGCTGAA 182421 29 100.0 33 ............................. GAAACCCCATCAGATGACCCTCCCCATGTTGGC 182483 29 100.0 32 ............................. TTGCCTGGTCTGCTTGGTGATGATCCGTGGTA 182544 29 100.0 32 ............................. TACAGAACGACTGAGGCGGCGTGTATTGCATA 182605 29 100.0 32 ............................. GATCTTAACTCTATTGCCAATGGCGCAATTCA 182666 29 100.0 32 ............................. GGCGATGCGCGCTCTGCTGGCTATCGGTAAAA 182727 29 100.0 32 ............................. AATGCAGCAACCGGCAAATATATCGCCGGTAA 182788 29 100.0 32 ............................. GGGCTGCCGCACGCCTGGGACGAGTCGAGCCC 182849 29 100.0 32 ............................. CCGCAATAACAAAAATAAATGAGGGTTAAAGT 182910 29 100.0 32 ............................. GTAAATGGGAATGAGTAGAAGAGCGTCATTGG 182971 29 100.0 32 ............................. CCCCCGCGCACATGCTTAAACGCGCTATCACG 183032 29 100.0 32 ............................. GGCATCTGTTGTGTAATGTTGAGTTTTTTTCA 183093 29 100.0 32 ............................. CAGGTTAAACATGTAAAAAATGACCGTCGCCG 183154 29 100.0 32 ............................. CACATTGCCCGGTCTGAAAAGTATTTGAAAAT 183215 29 100.0 32 ............................. TCCGCACAGTCAAACGCTCCAGACACCAACCC 183276 29 100.0 32 ............................. CCGGAACACCACCAGTAACAGCTACTGTAGGC 183337 29 100.0 32 ............................. TGACCCTGTTGATTTTGTTCCAGGTAATACGT 183398 29 100.0 32 ............................. TTAACCTCGTCGTTCTGGTTTCCGCCCAGGAT 183459 29 100.0 32 ............................. GAACCTGAATTCGAAGGGTGGGTCATCCTTCC 183520 29 100.0 32 ............................. GGACCCCGAGCGACCCGGTCACCCTCCGACCT 183581 29 100.0 32 ............................. CCGTCGAACGGCGGTTATATCCATCTTGAGTC 183642 29 100.0 32 ............................. ACCGATCCCACAATTGCGGCGGTTGAGATTGA 183703 29 100.0 32 ............................. GTTGGTAATTACTGCTGTGTGTTACGGATAAA 183764 29 100.0 32 ............................. CCGATTGTCTGGCGGTCGAGCGCCATTTGCTC 183825 29 100.0 32 ............................. TGCCGGACGTTGTACCTGTGAGTTAATTCTTC 183886 29 100.0 32 ............................. CGATAACCGGGCGTTTCGACTGAACTCACCTC 183947 29 100.0 32 ............................. TTAATACCAGGGGGCAGGTTCAGCAGGTCCCC 184008 29 100.0 32 ............................. CCGCTTTAACCCGCTCCGGCAGATCCGGGTGA 184069 29 100.0 32 ............................. CCCTCCGCTTTCAGGGTGTGGCTGATATCACC 184130 29 100.0 32 ............................. CGCGCTGCGAATTTGTTGGTCGATTTCGATCT 184191 29 96.6 32 .............A............... TGGGTAGAGGTTAACTGGTTATTGGTCATTGA 184252 29 100.0 32 ............................. ATCGCGGAGGCCTTCGGTGTGTCTCTTTCCTG 184313 29 100.0 32 ............................. CCGTTGTCAATATCTCCCGGCGTCCGCGCCAG 184374 29 100.0 32 ............................. CACGTCCGGAAACCACGGGTTATCCGTGTAAT 184435 29 100.0 32 ............................. CAGAGGTCCTTATCTTTTCAACGTCAAAGTCG 184496 29 100.0 32 ............................. GCAATCCCAGAGCGCGAATATCTTGGGCTCTC 184557 29 100.0 32 ............................. GACATGGCGCGCGAGTTTATCGACGCCTGCGC 184618 29 100.0 32 ............................. GGGATGAGCGTTTTCCGGTGGATTCTGATGTG 184679 29 100.0 32 ............................. GTGATCGTCATGGATATCACTGCCGTTCCGTC 184740 29 100.0 32 ............................. CAGACAGACAGCAGGCAGCAAACAGGGAAGAC 184801 29 100.0 29 ............................. GGGTTCACTTGGGTGAAACTGAACTAACT 184859 29 75.9 0 ...........ATTC...A......G..C | ========== ====== ====== ====== ============================= ================================= ================== 44 29 99.4 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : GTGCTGTCTGCTGGCGAAATTGAACCGCCTCAACCACCGCCGGATATGCTGCCGCCGGCGATACCCGAGCCCGAGTCGATGGGAGATAAAGGGCATCGAGGGCATGGCTGATGAGTATGCTTATGGTGGTGACGGAAAATGTTCCACCTCGCCTGCGAGGACGGCTCGCAATCTGGCTGCTTGAGATCCGCGCTGGGGTATATGTTGGTGATACCTCAAAACGGATCCGGGAAATGATCTGGCAGCAGGTGATACAGCTAAGTGACGGTGGAAATGTCGTGATGGCCTGGGCGACAAACAGCGAATCAGGTTTTGAGTTTCAAACCTGGGGAGAAAACCGCCGTATACCGGTAGATTTAGATGGCCTACGACTGGTTTCATTCCTTCCCCTTGAAAATCAATGAGTTGGATGTTCTTTAATAATGTGAGATTGTTGTGATAAAGTTGGTAAATTGTTGTGTGCTTAAAAAGCTATTATAAAACAGTAATATATCTTTAGT # Right flank : CGTCCACTAACGTTATCGATCCTGAGAGTGGGCACGAAAGCTTGCGGAGAATAAATATCGCTACCTGCCGCTCTAGCGATATCACTGTTTTTTTACCGTCTCCTGGATCGCGCTAAAATCCGGCTCCGGGCAATCCCGACCAAAATTTTCGGCCCATGGGAACGGGGCGCCGTACTTAACATAGCGCTGATACAGGCGTTTGGTTAATTGAGCATCCCGCCCCCATACCCATCCTGTTGCATTACACAGCACGGCAGCATAGGCCTGTGATTTATATGGCAACAGGTCGGCCGCTTTTTCCGCCAGCGTCACCGCCTGCCAGCGATAGTGTAAGAAATGACTGTCCTGTTTTAGCAGGGATCGCTGAACGCGTTGCCGTTCGCCATCACTTATCCACGATGTCACGGCCGAATTATCTTCCGGTCCCTGGTTGTAATAGGGCCATGAATACCCGCCTCCATACAGCGCAAAATCGGGCGCCATCTCATAGCCTGTCAATT # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [76.7-51.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //