Array 1 411696-410468 **** Predicted by CRISPRDetect 2.4 *** >NZ_RWTK01000001.1 Pseudomonas aeruginosa strain PAC61A IPC115_1.1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 411695 28 100.0 32 ............................ GTGGCACGACCGTGACCTGGGATGTGCCGACA 411635 28 100.0 32 ............................ GTTTCCCGGCTGTCTGTTATCGCTGTGGTGAG 411575 28 100.0 32 ............................ AAGGGCAACGCTGGCCGTCACGGCCGCCGAAA 411515 28 100.0 32 ............................ CGGTAGAGACGTCGGTGAGCGCTGCGATCTGC 411455 28 100.0 32 ............................ GCAATCGATCAGGCTATGACCGCCGAAGCCTA 411395 28 100.0 32 ............................ TCGACGTTGCCGACCCGCGGCCGCGCCCGGTT 411335 28 100.0 32 ............................ TCGGCCAAGGCTCCGGCATCGAGCACGATGCC 411275 28 100.0 32 ............................ TTGAGGAACAGGCGCGCTACGTCCGCCGCGAA 411215 28 100.0 32 ............................ TTGATGATGCCGTCCTGCTGTTTGCCGGCGAT 411155 28 100.0 32 ............................ ATTCCGGCAGAGGTTCGCGAAGCGGACATTGA 411095 28 100.0 32 ............................ TGTACCAACTGAGGTGCTACCTCAACCATGGC 411035 28 100.0 32 ............................ AGGCCGATGGAGTAGCCGGACAGCACTGAGCC 410975 28 100.0 32 ............................ TAGTGTGGAATTGATGTGCGCATCTTCTTAAA 410915 28 100.0 32 ............................ TGTGCCGGGCAGGCTGGCCAGCGCCTCATTGA 410855 28 100.0 32 ............................ GTCGGCCTGGAGTTTCGTCGGGCGTACATCAG 410795 28 96.4 32 .................T.......... CAAGCGGACGGTGACACGGACTATCAGACCGG 410735 28 100.0 32 ............................ ATCTCAGCGCCGCCTGTTCTGCCGGCCGCATC 410675 28 100.0 32 ............................ TACGGGCAGTCACGGCGAAAGGCACTCAGCGA 410615 28 100.0 32 ............................ TCGCGCAATGATTTCAGCCGCGGAGCGCATAG 410555 28 100.0 32 ............................ ATAGATAACACGTGTGACCGCGACCACTACCG 410495 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================ ================== 21 28 99.8 32 GTTCACTGCCGTATAGGCAGCTAAGAAA # Left flank : GACATGTGTCCGCGTAGCGCCACCCTGTACGTYGACACCCATGCACTCCCCACGCACTTGTTCGACAACGCGAAAGTGCGCTTGAGGTCGGCGATCAACATCCTGGCCATGACCCGTTTGCTCGATGAGAAAGAAGAGCCCGGCGGCACCCTGGCCTACATCAACGGTGCGTTGCTGTCGCTGCTCAGCGATGCCTTGTCCGAAATCGAGGCGGGCCACCCGAGCCTGTAGCGCCGCTCCCTGGCGCGACGCCCCCGGCCTGGCCGGGGGCTTTGCGGCATCGCCATCACAAGACCTTTCGCGCCCGAACGGCACGCTTGATCGCCGTCCCGGTCCTCGCGAAACGGCCGCCAATTGCCCGAAGCTTCCGACCCTTTTTTCGGACGATTTCTTACGCCCTTATAAATCAGCAAGTTACGAGACCTCGAAAAAAGAGGGTTTCTGGCGGGAAAAACTCGGTATTTCTTTTTCCTTCAAATGGTTATAGGTTTTCGGGGCTA # Right flank : CTCAAGAAAGAGCAGAACGGCCAGCTTGCGCCGTTCATTGCCGTGTAGTCCCGTAGGGCGAATGCCGCCATAGGCGGTATCCGCCCTACGGATCGGGTTCCTGGCATCCACGAAGTGAGGCTTGCCCTCCAAGTGGTGGGGCGGCAAACCCGCCCCGTCAGGAGGCCGAGCGGAATCGTTGCGGAGGGGGACGAGTGGCAGGATGCCGCGAGAGCCGCCTCGGTCCACGAAGGACCGTGGCGGCGTGCCGCCGGGAGCAACGATGCAGCGAGGGCACCCCAGCCGAGAAGCGGCTGGGGCCGGATGCCGGGGCGAGTCTTTTGGTTCCTTTTGGACGCTTGCAAAAGGAACTCGCCTGGGAAGGCGAAACAAGAGGCCAAGGCAGGCACAGAAAATAGCTTGACCACCAAACATGACGCCCGCTCAAGCGCTAAGCAACAGCGCCCCCCTCACTGCCGTGTAGCTAAGAAATCGCGAGCGATATAGTCCCGTAGGGCGAA # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTATAGGCAGCTAAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: R [matched GTTCACTGCCGTATAGGCAGCTAAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [40.0-58.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.55 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //