Array 1 198681-197003 **** Predicted by CRISPRDetect 2.4 *** >NZ_VBSA01000007.1 Raoultella terrigena strain UMG700 UMG700_7, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 198680 29 96.6 32 ..A.......................... GCGTACCGCTTCATGTACGGCCTGACGGAGTA 198619 29 96.6 32 ..A.......................... GTGGTCAGGACGTTCGCGGTAATGGTTTGCGC 198558 29 96.6 32 ..A.......................... TTGGGGTAACCCATCCAGTCATCTTCACAACC 198497 29 96.6 32 ..A.......................... GGTGTTAACTGCGCAACAGTGGAAAACGAACC 198436 29 96.6 32 ..A.......................... TCGTATGCCTTGAGCACCAGGGCGTTTTTGAC 198375 29 100.0 32 ............................. GTTGCTCATGCCGTTTGCCGTAAAACGTACGG 198314 29 100.0 32 ............................. GCAACATCATCTTCAGCTGCTTCCAGCGTGGA 198253 29 100.0 32 ............................. TCCGGTGTATCGCCGACAGTTATTGTGCCGCA 198192 29 96.6 32 ............................T CCACTTCGCGACTGATGCGAATGCCATTAACC 198131 29 100.0 32 ............................. CATTTGTTCAGGGGGTTGCGGACGTCGTTAAC 198070 29 100.0 32 ............................. TTGATCCACTCAACAGGCAGACCAGCTTCGCG 198009 29 100.0 32 ............................. CAAGGAAAGGAAAATTAAATCAATGCCCGGGA 197948 29 100.0 32 ............................. ACCCAGCGCGGCTGGAACCAGACACAAGTGGC 197887 29 100.0 32 ............................. ATTGCTCAACTTAACGAACTCATGACCCAGCG 197826 29 100.0 32 ............................. GACGCCAACTCCAAAATCGTCAAAACAGATTC 197765 29 100.0 32 ............................. GACTCAATAGCGTCGTCATGCGCATCAATCGC 197704 29 96.6 32 ............T................ ATTTCTTCAGCTTCATGTCTTTCGATAACCCC 197643 29 100.0 32 ............................. GATCAGAACACAGCTATGGCTGCTTTGCTATC 197582 29 100.0 32 ............................. TGGTTCTGGTCGACCATCATCGAGCTGTACGA 197521 29 100.0 32 ............................. ACCAATAACCAGTTAACCAGAGAAAAAGTGCA 197460 29 96.6 32 .........A................... GTTATGCGCCGAGACGGACAACCGATAGTGTG 197399 29 100.0 32 ............................. CAGATAGCCGCTCCGCATGATGAACGCTGGGT 197338 29 100.0 32 ............................. CTGTCTCTCCCAGGGTCTGATAGATTCGGATG 197277 29 100.0 32 ............................. GCAGCTCGAGGCGTGAATAAAGTCATTCTGGT 197216 29 96.6 33 ............................A TCTTTACCTTGCTGCGTTACAGTCTGCTGCAGC 197154 29 96.6 32 ...........A................. CATCCAGGCGGATGAAGATGTTTTCATTCTCG 197093 29 100.0 32 ............................. CCCGGCGCAGCCGGCAACGGTTTGATAGGTTC 197032 29 93.1 0 ........................T...C | G [197006] ========== ====== ====== ====== ============================= ================================= ================== 28 29 98.5 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : GTGCTGGCAGCAGGTGAAATACTTCCACCGCAACCAACCCCCGATATGCTACCTCCGGCAATTCCTGAATCGAAACCTATTGGAGATTGCGGCCATAGAGGGCGTAGTGGATGAGTATGGTTGTCGTTGTGACCGAAAATGTCCCACCGCGATTACGAGGTCGGCTTGCAATCTGGCTTCTTGAAACACGAGCTGGAGTTTACGTTGGTGATACTTCAAAACGCGTCCGTGAAATGATCTGGCAACAAGTTTCTCAACTTGGCGGCTGTGGGAATGTTGTAATGGCCTGGGCAACGAATACTGAATCTGGTTTTGAGTTTCAGACATGGGGAGAAAACCGCCGTATGCCGGTAGATCTAGATGGGCTTCGGTTGGTTTCATTTTTTCCTTTTGAAAATCAATAGAATAACGGTTCTTTAATAATAAAAAATTGTTACAACCAAGTTGGTAGAGTGTTGGTTGATGGAAAGGTTATTGAAAAATAACAATATATTTTTAGT # Right flank : TTCCTGGCTGACCAGCAAAACTCCGGCTAGCCGCGCTTATCGGCCTTCGCCAGCTCTTTCACCAGCGGCAGCATCACCTTGACGACGTCGCGGCTGCGGCGTTCGATGCGGCCGGGCAGCGCTTTGTCGATATGCTGCTGATTATCCAGCTGCACGCTGTGCCAGCTGGAGCCGTCAGGGAAGGCGGGTGATTTTGCCCGCTGCTGGAAACCATCTTTCTTACCAAGCGACCAGTTGGTGGCCTCCACCGACAGCACCGGGATCCCGGCGCTATCAAAAATACTGGCGTCGTTACAGCAGCCGGTGCCCTGCGGATAGTCGCGGTTCAGCCCCGGATTGCTGAAGGCGGCAACGCCTTTGCTACGGGCGATGGCCAGCGCCCGGTCGCGGGTGAGCTTGCGAATCGATGCCGGCGTGCTGCGGCCGCTATTAAAATAGAGCTTGTCGCCGACCACCAGATTATCGAGGTTGATCACCAGCAGGGTGTTTTTCTTCTCCTC # Questionable array : NO Score: 6.19 # Score Detail : 1:0, 2:3, 3:0, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [6-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [40.0-71.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //