Array 1 96488-99220 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAHLPM010000011.1 Tissierella sp. MSJ-40 M40_ctg0011, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 96488 30 100.0 36 .............................. CATTTTCCCACCTCTTTTCTCATGTTTTACGTTCTT 96554 30 100.0 36 .............................. TTTCAAAGTATCGTTCTAGTAAGCTTTCGTCACTTT 96620 30 100.0 36 .............................. TTAGTTCAATGTTTGGATATACCGATTCAAAATGGT 96686 30 100.0 36 .............................. TTCTCAATATCTGAAATGAAAGAAATAGATAAACCT 96752 30 100.0 36 .............................. CATATATGGGAAAAGCAAAACCTTGTAACTCAAAAA 96818 30 100.0 36 .............................. ACTCTTCTACCGTATAGTCACTAGGATTTTCCTTAA 96884 30 100.0 37 .............................. GCCCTAATAGCCGCTTGAGTGGCATTAAGGTCTATTA 96951 30 100.0 37 .............................. ACGTTATCGCAATGTATACAAACATATAAAAGGATTA 97018 30 100.0 37 .............................. TGGCAATAATTAAATCCTCCCCATGCTCTCCAGGTAA 97085 30 100.0 36 .............................. TCGGATTATTATTATGATAGAGATTAGCAACATCAT 97151 30 100.0 37 .............................. CTTTTTATATGCCCCAAGGCTAACCTCTAGAAATTCA 97218 30 100.0 36 .............................. GTTCTTCAGCTATCTCATTAAGTGTTTTTCCTTCTA 97284 30 100.0 36 .............................. AAGTATATCTGATGTCGTATTTCTTGCCTATTTTCA 97350 30 100.0 36 .............................. ACAGCTCTTTCTATTATTTCTTTTTCATTTTCATTT 97416 30 100.0 37 .............................. GGAGAAATGATATTATTGACTTCAAATGTAATAGATA 97483 30 100.0 36 .............................. TTGTAAAGATGTTGTAACGCTGTCCCCGATGGGCTA 97549 30 100.0 36 .............................. CTTTCTCCATAGAGATTTATTTTAAAATCAACAGGA 97615 30 100.0 36 .............................. GGAACAAGTGGAAATCCTAGTCATTATATAGAATGG 97681 30 100.0 38 .............................. CCAGTTCCCTTGCTTCTTCTTTTGTTAGTTCCCTATCC 97749 30 100.0 36 .............................. CAGGAAAACGATAGAAGAACAGGAACATTCTATTGC 97815 30 100.0 37 .............................. GACAATATAATAACTACTTTGATATACCTTCATATGA 97882 30 100.0 36 .............................. ATGCATTGTCGCAAGGAATAAAGAAAAAATGGCAAG 97948 30 100.0 36 .............................. TCTGTTACTTGTTTAGTGTTTATTTCGGTTTTAAAA 98014 30 100.0 36 .............................. TTAAATATGAAGATGCCTCTGACACTCCTGTCATAG 98080 30 100.0 36 .............................. ATAGCTAAAAAATTGATAAAGAAATTTAGAGAGTTA 98146 30 100.0 37 .............................. GACTGAAAAAGCTGTTTAGTCTGCTCTGTTAAAGATT 98213 30 100.0 36 .............................. GCTGCAACTGAAAAGGTCAGGAATGAATCTTTAGAG 98279 30 100.0 36 .............................. GATTTAGAAGGTATTACTGGTTTACTTCAGAAGATA 98345 30 100.0 36 .............................. GGGATTAGTGGTAGTAATAAGCGAACGCATAGTATA 98411 30 100.0 36 .............................. TGGCAAAACTGCGGGACCCTTCCACAAGTGAGACCC 98477 30 100.0 36 .............................. GATCTCCTACAATCTTAAGCCCACTCTTAGAAACAT 98543 30 100.0 36 .............................. TTTCATCACCACCTTTCATGATAAAAATAAAAGAAC 98609 30 96.7 36 .............................G CCATCTACATTAGCAGAATTAATTAATTATAAAAAA 98675 30 96.7 36 .............................G AAGGCAGAGTGGAGAAAAGAAACTAGTAGAATTTTA 98741 30 96.7 36 .............................G TTACTACTATCATCAATGTTCACTTTCAAAGATTGT 98807 30 96.7 35 .............................G AAGACTGATAGTAGTAAAAGAATTCTCCCAGTACT 98872 30 96.7 36 .............................G ATAATTTTACATAAATATCTTGAAACATAATAATTA 98938 30 96.7 36 .............................G GATTATGACTATTGCAGGTTATGTGGAACTGCATTA 99004 30 96.7 36 .............................G ACACTTGGGTTAAACGATTTTAAATCTATTAAATTC 99070 30 96.7 36 .............................G ATATTCTCAAGACTTCCAGTAATTCCAAGTGACCAA 99136 30 96.7 25 .............................T TTACCAGTAGGTTACTCAAAGAGTA Deletion [99191] 99191 30 80.0 0 T.....................GAA...GT | ========== ====== ====== ====== ============================== ====================================== ================== 42 30 98.8 36 CTTTTAATAGAACTAAAGTAGAATGTAAAA # Left flank : TATAATGGATTTAAAATTTGGTGGTGATATTAATCATGTATATAGTATTGATGTATGATATAATTATGGATGAAAGTGGTCCTAAAATACACAGGAATATTTTTAAGATATGTAAAAAATATTTGACTCATATTCAAAAATCTGTATTTGAAGGTAATTTAACAGAGTTGAATTTAATGAAGCTGAAGTCAGAATTGAATAGATATATTCGAAAAGATAAAGACTCTTTAATTATATTTAAAAGTAGAAATGAAAGGTGGTTAGAAAAAGAATTTATAGGATTAGTAGATGATAAAACATCTAATTTTTTTTAAGAATCTTTCTGTCGACCTGTAATAGTGCAAAAAACTATGGAGATAGACAATCCTGATAAAATACATATTTAGAGTATAAAATATAGAAGACTCATAGAAAGTTTTTATTAATTTAATTGATATAAATACTTGATAGACAGAAATGCATGGATAACACTAGATAAATCAATGCCTTCAAAGAAAAGC # Right flank : TTACTATTTAAAACTTGAGATAAAACCTAATTTAAATTATATACATAAATTATTTTAGTTTATCGTTGGAAGAAAATATTATAGTATTAAGAAGAGCTTTGAAAAATATAGAATATAAAATCATAGAGGGACAAGTTGAAACATTAATGAATGCTATGAAGAAATATAATTGACGACTCCATTAACTATGGATCAAAATGATATGCTATACTGTTATCATATATATAAATAAGGATGATATACAATGAAATATATTGCTGCTAAAAACATAATTATTCCTAAGAAAGATCCTAGTAGGTGGTTTGGAATTAATTATAATATGAATATTTATCGAGGTTGTAGTCACAATTGCATTTATTGTGATTCTAGAAGTGAATGTTATCAAATTAATAATTTTAATGAAATTGTGGCCAAAGAAGATGCGTTATTAATAATAGAAAGAGAACTTAAATCTAAAAGGAAAACCGGTATAGTTGGAACAGGTGCTATGAGTGATCCAT # Questionable array : NO Score: 6.19 # Score Detail : 1:0, 2:3, 3:0, 4:0.94, 5:0, 6:0.25, 7:0.00, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTTTAATAGAACTAAAGTAGAATGTAAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:80.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-7] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [66.7-86.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0.27 Confidence: LOW] # Array family : NA // Array 1 30826-32170 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAHLPM010000018.1 Tissierella sp. MSJ-40 M40_ctg0018, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 30826 30 100.0 36 .............................. TGGTTACATTCCCTGCTGCATCTGTTGCCACAAATT 30892 30 100.0 35 .............................. CTTCTTTTTCAGTAAAAAATTCTTCTCCACCTGTA 30957 30 100.0 36 .............................. AGGCAAAAAAATTATTTTTAAAAAACAAAAAATAAT 31023 30 100.0 35 .............................. TTTTGGACTTTCTGTTTAAACACCATATCACCCTT 31088 30 100.0 35 .............................. TTCTAGAAATCAATTAGCCTTTAGTGAAGAAATCA 31153 30 100.0 36 .............................. TCGTCAAATGCTATTGAGTTGAGGGAATCTAGAACT 31219 30 96.7 35 .................G............ TATTACCTCTTTTAACTTATCTAATGTAGTTTTAT 31284 30 96.7 37 .................G............ AAATGCAACTAATGTTTTAAATTCTGTTTTTAATTAA 31351 30 96.7 36 .................G............ AAGTTTATAGAAGTTCATGGAAGTTTAATTAATATT 31417 30 100.0 36 .............................. TTTTCTACATACCTCACTTCTCCGTCATATACTTTC 31483 30 100.0 37 .............................. AAGAATCCCACATTCTTTTTGGACTTACTTGTTCCAA 31550 30 96.7 36 ............................G. TGTAATTTCTTAGTTTCTTTATCTATAAAAGCTTTT 31616 30 100.0 36 .............................. GGGTTTAAGGATATATTTACATCGTGTACGTTTTCA 31682 30 100.0 36 .............................. ACTATTGGAATGATTGAAAGTGGAAAAAATAGGGGT 31748 30 100.0 36 .............................. AAAGGAGTTAATGAAAGCTATAGAAGAAATAGCAAC 31814 30 93.3 36 ...........G.....G............ AATAAAAACTTTAAAAGAAACTTATAAGGATTTATT 31880 30 96.7 36 .................G............ AATAGTTAGAAGAGGTGATATTTATTATGCGAACTT 31946 30 93.3 34 ..........G......G............ GCTGAAGAATCGATAGAGAAGGATAAGGGGGTAA 32010 30 93.3 35 .................GG........... ACTAATTCCATTACCTTATAGCCATAACCATTACC 32075 30 93.3 36 .......T.........T............ AACTTAAAAAAATATGAGTTTGGAACCAACTCTAGA 32141 30 93.3 0 ................AG............ | ========== ====== ====== ====== ============================== ===================================== ================== 21 30 97.6 36 GTAGAACCTAAACATAGAATGTATTTAAAT # Left flank : ATTAGATTGGATAAAAAATGAGATTCCTCATATATTAGAAAAGGATCTGACGATCAAGCAAATACTTTATATTGAGGGAATGATCTGGGAAAGGTTTTATAATACATTTGATTTTATTTTGAATAAAGAATTTGTATTTGAAAAAAGGACAAGAAGACCACCGGAAAATCCATTAAATGCTTTAATATCTTTTGGAAATAGTTTATTATATACTAAGACAATTTCTCAAATATACAATACACATTTAGATCAATCAATTAGTTTTTTACATGAGCCAAGAGAAAGTAGATTTTCTTTAAGTTTAGACTTATGTGAAGTGTTTAAACCTATTATTGTTTTTAAAACGATATTTGATACAGTTAATAATAGAAAAATTCAAGTAAACAAGCACTTTGATCAATCATTAAATTGTTGTTTATTAAATGAGACTGGAAGAAGAATCTTTATAACAGAATTTGAAGAAAGGCTAAATAAAACTTTTCTTCATAAGACATTAAAGA # Right flank : TAGCATTATGAAAAGGATACTACGTTCTGAGTGTCGTATTCAAAAAAACATGGATGAAATTAAAGGAGTATTAAATGATTATGAAGAAATGCCAGAGCTCAGAATTGAATAGGAAGATATAGAAAACAATATATCGATAGAAGCAAATGACTTAAGTTTTGGTTATACAGAGAAACTCCTTTTTAATAATATATCTTTCGAAATAAAAAAGAAGATAGACTATGTATTAAAGGAGAAAATGGAGCAGGTAAAAGTACTTTATTAAATATTATTAGTGGAGAAATATCTCCTAAGTATGGAAATATCAGAGGGAATAAAGATATATTAATTGATTATAGTAAACATCTACCTTTATATAAAAGAGGTTATATATTTGATTATTTTAAAGATAAGTTATTAGATAGAGTGATTGGAGTTTTAGAACTATTTGACATAAATGAAGAGATTTTAATAGACCATTGGATACATTAAGTCTAGGGGAATTGAAAAAGATTGATATT # Questionable array : NO Score: 2.99 # Score Detail : 1:0, 2:0, 3:0, 4:0.88, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.85, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTAGAACCTAAACATAGAATGTATTTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:76.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,-0.60] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-11] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [76.7-68.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0 Confidence: MEDIUM] # Array family : NA // Array 1 190457-191280 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAHLPM010000007.1 Tissierella sp. MSJ-40 M40_ctg0007, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 190457 30 100.0 36 .............................. GAAGACATTAAAAGAAATAGCACAAGAATTAAACTA 190523 30 100.0 36 .............................. ATAACTCCATCTACTAAACTCCACTCCTACTCCAAA 190589 30 100.0 36 .............................. AAATGCTAAATAATATTCAATATGAACAATATAAGC 190655 30 100.0 37 .............................. GCTTACAAGCAGGTAGTATTTATACTATTAGATATAA 190722 30 100.0 36 .............................. TAACAGGCAAATAAGTAAATATGGTTTATTAAAAGT 190788 30 100.0 36 .............................. AGAGGGGTTAGGATTTTTCTTCTCTCCCCCCTATTT 190854 30 100.0 37 .............................. CTAGATATTTCAAGTTCATAACTTGTCCTACCTCCAT 190921 30 100.0 36 .............................. TCTTTGCAGCATATCTAATACCTCTGCATATGTAAT 190987 30 100.0 35 .............................. TTGTTATCTTTGTATTTTCAATTTGAATAATATTT 191052 30 100.0 37 .............................. AGTAAAAGAGACCATGATAGAGGCTGGAATAGATGAA 191119 30 100.0 36 .............................. ATATATATCTCCATTCTTGCCTATTACTATAGAAAC 191185 30 100.0 36 .............................. TAGTCCTATATAGACTTTAGGAAGATAATGGTCATG 191251 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ===================================== ================== 13 30 100.0 36 GTTTACATTCTAATTTAGTTCTATTAAAAG # Left flank : GATGACCCCATTACTATATGAGTAATATTATGTTCTTTTGCAAAATCAATCATAGTGGATATAATATTCTTTGACCTAAGTACCGTTAAGTCTGCTCCCACTTCTTTAGATGCACAAAATAAATATTCTAAGGCTTCACCATCATTTTCCTTATTCAAAAATTTTTCCTTTTCATTTACTACGTGGATAACATATAATTTGTCTTCTTTATTTTCAATCATATTATAGCCATTCAGAATCAATCTCTTACAAGTTTTTTGCTGTGTAACACAGACTAAAATATTTTTTTCTTCCATGTGAATTCCCCCTTTAAGAAGAGTGTCACCCATTCCATTATACCATGTTCTTCATTATAATAGTATCCATTTTATATGTGTTAGCTTTTAGCCTTCTTCATTTGATAAACATGTCATTTCTATTAGATAAATGATATATTTTTAAACAAAAATAGAATAGCTATAGCTATTCTATTTACTATTATGATTTTGAAACATTTTCTA # Right flank : GGTTTGTCCTCAGAGGTATTGATTTTCCTGGCTTTAACTATATATTTCTGTCTATCAGGTATTTATATTAATTAATACACTGAAATTTTCATATAATTTATCTATTTTCTCTACTCTAAATATGTATTTTATCACAATTGTCTATCTCCAGGCTTTTTACATTATCATAGGTCGACAGATATATTTTTTTAATGTAGATTAAATAATATTTATATATTATAAAATTACTTCTATACAACTTAATGATATTTATATTATACATATAATTTATATTTAATCAACATTGCGACAATTACCCTCATATCCCTTACTCGTTTTCAACTTTAGTAGTTTTTATATTTTTAGAAAAGTTTATTTTACGTTATGGCTTTAAATATCACTCTCTTCACTTTTAGATAGATATTTTATCATTTTACTTAACACTTAAAATTATTGTAATATGTTAAGATTAGACGATGAACTTTTTTGTAAATTCATTATTATGCTATTAACAGCAGACG # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTACATTCTAATTTAGTTCTATTAAAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:80.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [80.0-65.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.27,0 Confidence: MEDIUM] # Array family : NA //