Array 1 99954-99314 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP016808.1 Paenibacillus sp. BIHB4019 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ==================================== ================== 99953 33 97.0 35 .............C................... TGCAGCTCAATGCCGGCTCGGAAAAAAGTTAACTT 99885 33 97.0 35 .............C................... TGAAAATGGAAAATTTGCAGTTGAAGACTCATAGC 99817 33 97.0 32 .............C................... ACAGTTGCGACAATCGTCCCTATACGGGACAA 99752 33 97.0 34 .............C................... TACTCTGGCTACGCTCGCGCAATCGGCAACCAAC 99685 33 97.0 35 .............C................... CCTTTCCGCATTGAGACGCGTATTAGCCATGTCGA 99617 33 100.0 34 ................................. ACCTCGCTCTCAGGTAATCTACATCATAAATTGC 99550 33 100.0 36 ................................. ATGCTGTAGAAAGGGCAATTACTGCTGAACGGAAGC 99481 33 100.0 34 ................................. TTTGATTATAAATGACGCGTGCTACATACTCATA 99414 33 100.0 35 ................................. TGCATTTCTGTTGGATCATCTATAGGTGTTGATAC 99346 33 100.0 0 ................................. | ========== ====== ====== ====== ================================= ==================================== ================== 10 33 98.5 35 GTCGCACTCCGTATGGAGTGCGTGGATTGAAAC # Left flank : CATGGCACGAATGAAGCGGTGGTAGCGGCTATTTTGCGCGAAGGCATTCAGGCGATGGGCCGCCAATATTGCCATCTGTCGGAGGGGCTGGATTTTGCAGCCCTTGCAGGCAGCCGAAGGGGCAAGCTGGCGATTTTGGCAGTGGATACGCAGTTGGCCGCGGAGCTCGGGGTTGTTTTTTATTATGCTGGCAATGAGGTCTGGCTGGCTGAGGAGATTCCGGCGGCCTGCTGCCGGATATATGATTTGCCGATTGTTACGGCGAAAACTTAGGTGCAAGAATTACAATTTGAGCAGAGGAAATCATAGCCGTCCTTTGGTGCGAATGTGAAGCTCCCATGAAATCCCTAGGAGATTCGCACCTCGGAAAATGTCGATAAGTGTCGAAATTGAGTGACTCTCTAAAAAGTCAATGTTTTAATCATATACGCTTAGCATTATTTTTCTTGAAAAGATCGTGAATTGATGCCATGATGGGATCAATTGTATGTAATTTCGCT # Right flank : TCCATAAAATCATAGTATTGAGGGTTAAACATCTCGTCAGACAGCCTTTTTCAAACAATTCAAAAAGAGTATGAAGGTTTTAATAGCCTCCATACTCTTTTTATGTTCGGCAGTGAAAGGAATTTCAGGCTGCCGAGTTTATAATTCGTCTGGCGATAAGCCAGTAAGATAAGGCTTTATCCTTTTTTGCTGTCGTTGTTCGTCAAGCAGCTGTGCCATCTGTTGTTGGATGCGTTTCGTCTGCTCGGTCGCGAAGGCAGGATGGGCGAGATTGCGTGTTTCAAGCGGGTCAGCGGTCAAATTATACAGCTCGTATTCCTCAGCAACAGGAACGGTTTTGATAGCTGCAACATAGCAGATATTAGAGGCAGAGGGTGACCCGGAGGCTGCACTCCCGGCATGCGAAGCGGTCGGCTGAAAGGTTACGTCTCTAGTTCCCGGCTCGCTCCAAAACTGCTCGTTATCATAATAGCGGGAATACTTCCATAATTGTTTGTTGT # Questionable array : NO Score: 9.11 # Score Detail : 1:0, 2:3, 3:3, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.92, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACTCCGTATGGAGTGCGTGGATTGAAAC # Alternate repeat : GTCGCACTCCGTACGGAGTGCGTGGATTGAAAC # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: F [8,7] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-6.00,-6.20] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [66.7-66.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,4.5 Confidence: HIGH] # Array family : NA // Array 2 644287-644656 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP016808.1 Paenibacillus sp. BIHB4019 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= =================================== ================== 644287 33 100.0 35 ................................. CAGTGTACGCAGCTCGCCGGCAATAAGATCCGACC 644355 33 100.0 35 ................................. TATAGTGTCTTGGAATGACGGTATTTCAGCGTTAG 644423 33 100.0 35 ................................. ATATCCTCGCTGGCTCCGGCAGTCTTGCCAAGCTC 644491 33 100.0 35 ................................. TGGACAATCTCCTCGGCCTCAGTTTCGGGCGCGAA 644559 33 100.0 33 ................................. AATGTTGTCGTCATATTTATAATCTCCTTTTTA 644625 32 87.9 0 ...........C....-....A..A........ | ========== ====== ====== ====== ================================= =================================== ================== 6 33 98.0 35 GTCGCACTCCGTATGGAGTGCGTGGATTGAAAC # Left flank : AGTGGCTGTGCTGCAAATTAAAAGCCGAAGGCACGAAACGATTTAGTGAAAAAAGCTGCTGAAGCTCATCCTCCGAAATCGCCACATTTTCCACAAAATTCACTGCCGAACGACGTTTTTCGATAATCGTTTTAAGTTCTCCCATGTTCAAACGCTCCCTTTGAAAAATCATTTTTATGTAAGATTAGTTGAAGGCTTGTCTTTATGTTTGTAATTATAATATATCTACTTTAATTTTGTAAGTAGTTTTCGAAAAATATTTTTGTGATTGCTTGCGGATGCGAAAGCGTGCATGACAAATTGATTGCTTCGCATTTTTGGTGCGAATGTGAAGCTCCCATGAAATCCCTGGGGCATTCGCACCTCAGATTATGTCGAACCGTGGCGAAAACGAGCTGTTCCGTAAAAAGTCAAGCTTGCTCTTATCTTTTTTCGATATTATTTCGTTGAAAATACAGGCGATTAATGCCATGATGGGATTAATTGATACTGTTTTTGCT # Right flank : CAAAATAAAAAGACTCCTACAAAGAGTCTTTTTATTCGCACCTCGTATAGCTCTCGACAAGTCCCCTCATATCCCCCGAAAGAAACTAATCTTATTCCGTTGCCGCCTCGCTCAACTCCTGTTCAATTACAGCTTGGATGGCCTCGTAATCGAACGGATTCCCTATTCTCTTGTTGTTAATCATAATGGTCGGAGTCTGCAAAATATTAAAATCCTTCACGAGCTGCTGATCTTGATCGACCCGTGCCTGTATTTCTTCCGAGCTCAGCAGGGCTTTGAACTGGTCCTTGTCCAAATCCGGAACGGAAGCCTCTGCTACCTGCATCAGCTTCTCTACTGTAATCCAAAGTCCGTCATGGTCTGCATCTGGCTGCTCCGCAAACAAAGCTTCATGGAAATGCCAGAAATCGTCCGGATTCGATTCTAGCACCGCTTCTCCAGCCAATGCGCCTAATGCTGATTCTGCCCCATGAAATAGAACGTTCACATACGAGAACGAG # Questionable array : NO Score: 9.16 # Score Detail : 1:0, 2:3, 3:3, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACTCCGTATGGAGTGCGTGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: R [7,8] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-6.20,-6.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [66.7-63.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0.37 Confidence: HIGH] # Array family : NA // Array 3 708437-708130 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP016808.1 Paenibacillus sp. BIHB4019 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ===================================== ================== 708436 33 100.0 35 ................................. TCCTTTAAAAATCTTGTGCTGTCATCCAGCCGTAT 708368 33 100.0 35 ................................. TTTCGTGGTTAGCTGCTGGTTAGCTGCTGGTTGAC 708300 33 97.0 35 .....................A........... ACCTGCTGATACGCACGCTTTGCACTGTCCATAGC 708232 33 93.9 37 ..............A........A......... CCATCAACATTCACTTTCATTGCCATGTTCGTCTTCA 708162 33 78.8 0 ........T....C........CAAT..T.... | ========== ====== ====== ====== ================================= ===================================== ================== 5 33 93.9 36 GTCGCACTCCGTATGGAGTGCGTGGATTGAAAC # Left flank : GATGCTGGGGACGGGGTATGAATCCTGCACAAGCTTTCATCTGGCTGAAGCGATTTGTGAGCGGCTGCCGATGAAACAGCTAGGAACCGCTATTTATGAAGGGGACGAGCGAGTGTGGAAATGGTTCACGGATTTCGCCTATGATTCGGCAGATTTTGCCCAGATCGGGCAGTGCTACGACTATGAAGGCTCCGTGCAAAAAGGTGCGGTAGGCAGCGCCGAGTCCCGGCTTTTTGATCTGAAAGAGGCAGTTGATTTTGCCAAGCAGTGGCTGATGTTCCATCGTGCGATGGAGTGAAGAAAGTTTATGCCGATGCAGGTGCGAATCGGAAGCTCCCATAAAAACCCTAGGGGATTCGCACCTCAAAATTTGTCGAACCATGACGAAAACGAAGGACTTTGGGAAAAGTCGATATTTTATTTAGACTTTGTTCGTATGGATGATCTTGAAAATATATGCAACTGATGCCATGATGGAATCAATTGTATGTATTTTCGCT # Right flank : CACAACAATCACAAGTAACCAAAGAGGGCCTCCATGAAATTTTGCACAAGAGAATGGTATGAACTGATGCAGATTACTTCATTTCTTATTTATCCGGAAACGGAGGAGCAGTGGGAGGAGGAGTTGGCCTACTATCGTTCAGAAGGTGTAGACTACTTGGGGATGCAGCGAGAATCGTTGGAGGAGAAAAAAGAACACCTACTAAAATACCTTCCTGAACCGTTCCACCTCTACATTCACGACGGCACGTTCAACACTGTGTACCTGCCTCCTGAATTGAAGGAAATGGCGAAGGAGTGGAAGCAGGATTAGGAGAACTGCAAGGCTGATTTGCAAGAGGAAAAATGTATTCCGACACTCTACAAAAATAATTAGCATATAAGTTACTTGAGAATGCCGGAATAGCCGGGTATAGGGTTATTTGATGGAGCGCTTCATCGATAAAGGGTTTCCCGCAGGATTGTGGTAACAAATTCGGTCTTTCCTTCACAGTAGCTGTC # Questionable array : NO Score: 8.68 # Score Detail : 1:0, 2:3, 3:3, 4:0.70, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:0.92, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACTCCGTATGGAGTGCGTGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: F [8,7] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-6.00,-6.20] Score: 0/0.37 # Array degeneracy analysis prediction: R [9-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [60.0-68.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,4.91 Confidence: HIGH] # Array family : NA // Array 4 719097-718521 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP016808.1 Paenibacillus sp. BIHB4019 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ===================================== ================== 719096 33 100.0 36 ................................. GTAGTGCTGGTCAACCAGTGCCCGCAGTTCAGGCGG 719027 33 100.0 34 ................................. CTGATTGAAAAGCAATGCGGAACTTGCGGAGAGT 718960 33 100.0 34 ................................. CTGATTGAAAAGCAATGCGGAACTTGCGGAGAGT 718893 33 100.0 37 ................................. CACTAACATAGATTTTCAGCGTGCTACCAGCCTCCAG 718823 33 100.0 33 ................................. ACGATTACAAAGGGCTAAAAGGTATTTCGTAGG 718757 33 100.0 34 ................................. ACAAAATAACTATTGACTATCATGGGTATTATTG 718690 33 97.0 35 .............C................... GCTTTAGCTCTTTGCAGAGTGCTTTCCATCCGTTC 718622 33 90.9 35 .............CA......A........... CCGTATATCACACATCGATTGGCTCGTATGCCCCT 718554 33 84.8 0 ..........A....A.....AC..C....... | G [718528] ========== ====== ====== ====== ================================= ===================================== ================== 9 33 97.0 35 GTCGCACTCCGTATGGAGTGCGTGGATTGAAAC # Left flank : TTGTATGCTCGTATTAATTACGTATGATGTGAGTACATCGAGCAAGGAAGGGCGTAGAAGGCTCTCCCGAGTGGCAAAAACCTGTCTAAATTACGGTCAAAGGGTACAGAACTCCGTATTTGAGTGTATTGTAGATGCGACGAAGTTTCGCCAATTGAAGTATGAATTAGAGGAACTGATCGATAAGCAGACGGACAGCCTGCGCTTCTACAATTTGGGTGATAATCACAAAAGCAAGGTTGAGCATATTGGGGCAAAAGAAGCCTATGATATGGAAGCAGCGCTTATTCTATAAGTGAAAAATTTTTGCGGGTTCATTCTGCGAATGTGAAGCTCCCATAAAAACCCTAGGGGATTCGCACCTCAAATATTGTAGAAACTTGTCGAATTTGATTCATTTCAAGAAAAGTCAAGGTTTTATTCAGATTTTTTTGCTATTATATTTATTGAAAAATGGGGTGATTGATGCCATGATGGGATCAATCACTAGTATTTTCGCT # Right flank : AGGTACTATAACTTGTCCATATGCGGTGCTGCTCTGCTCATACCAGCACCGCTATTGCTTTTTTACGATATGTTATACATTTTTGATACTAGTTCCTTGATAATCATACCGGAATAATCAAACGATCTTATTGGACCAGGTTAGAATTCATTTCATACACCAAAAATTTAAATCGTAAAAAGCGTTGAAGGCAAATACACCCCAACGCTTTTTTAATTAATTTTACAGATTCGAAATAATATTTTGAACATTGTTAATCATTCCGGTCCAGACCGTAGTTGGTCTGTCGGGGTAAGAAAATGCAACGTCAATATAGTCGCCTAGAGATCTGCAAGGCTCTCCGTAACTTGGGTCTGCGTTAGGGTCGAAAGAAGCCGCGGAAAGGCGTGTATTGACTGCGAACGTAGCGCCAGCATCACCAGAGGTTGTACCGTATACATCCAGCAAGCTGGAGTTTACTCGATTTGTATAATAGACAATTTGGATGAGTCCTGTTACTC # Questionable array : NO Score: 9.11 # Score Detail : 1:0, 2:3, 3:3, 4:0.85, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACTCCGTATGGAGTGCGTGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: F [8,7] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-6.00,-6.20] Score: 0/0.37 # Array degeneracy analysis prediction: R [10-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [51.7-65.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.18 Confidence: HIGH] # Array family : NA // Array 5 5434361-5435257 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP016808.1 Paenibacillus sp. BIHB4019 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ =================================== ================== 5434361 32 100.0 35 ................................ ATCCTCCAGAATGTCAGCGAATGCACTGGGGAAGC 5434428 32 100.0 35 ................................ TCATCCTGCAGCCTGTTATACGCCTCTTTAATATC 5434495 32 100.0 35 ................................ CATAATGGTCCACTGAACGAGTCCAGCAATAGCCG 5434562 32 100.0 35 ................................ ATCCTCCAGAATGTCAGCGAATGCACTGGGGAAGC 5434629 32 100.0 34 ................................ ATGACGTACTACCTCCAATGCGTCTCTCTCAGAC 5434695 32 100.0 34 ................................ AGTGCGTGGGTACACTCCTGCAGCAGCCGTTTGT 5434761 32 100.0 34 ................................ CGATCTTAATAAAAGCAAACAGATTGTCGATAGC 5434827 32 100.0 35 ................................ TTTACTTGTGTCAGTGTCAGCATCAACAGCACCCC 5434894 32 100.0 34 ................................ CGCATTGGCATCATAGAGCAGCACGCCAGAATCC 5434960 32 100.0 34 ................................ AGGACTTATCGGAACGCCCCAACAAGCCGACTTA 5435026 32 100.0 34 ................................ ATTTAGCATCTTGCTTTCACCTTGTCCTCATGCA 5435092 32 100.0 35 ................................ TTGGATGATTCGGGATACCAACTTCATCGCTGGAT 5435159 32 96.9 35 ..............T................. ATGATAGTGAGATAGTCAACGAAAATGGCTCCTAT 5435226 32 93.8 0 .........................A.....T | ========== ====== ====== ====== ================================ =================================== ================== 14 32 99.3 35 GTCGCTCCCCGTGCGGGAGCGTGGATTGAAAC # Left flank : TATTCTCTAGGCAACATGTATGCAGCACAATTCGCCGATACGTTGGAGCGAGAGCTGCCGAACTTCTGGGAGCTTGTAAGTGCTGGAAATCTGCTGCCGATTAAAGAATGGCTTAGCGAACGCATTTACAAATACGGAAAGCTCAGAACACCTTCTGAATTGATCCAAAATGTAACCGGCAAGCCGCTGGACCCGCAATATTTGGTGAAATATTTGGAGAAGAAGTATAGCGAGATTTATAAGCTGTAATACGGGATTAGTTGTAGCTGGTAAGGAAGGTTTGGTTAGTGGGGGAAAGCAGCTGCGCTATTGTTAGGAAGCGACTTACCTCCACGCGAACCGGAAGCTCCCATGAAAACCCCGGCACTTTCGCACTCCGCACCCCGTAAGGGGTAATGCGGATTTTGAATTAGATACACGGGTGGATAAGGAAGAGGAAAATGAGGTTCGCGAAAATGGCCCTTTTATTCCTTGCTAGGTAAGGAGTTTTTGGGTGTGCT # Right flank : TGTTTATTAATTTATATAAATTGCAAATTTATTTTATTGCTTCCGATGATGTGTATGCAAACGGAAGCTCTTCCTGCTGCCGATTGCTAAGTACATATTCGAGACCAATCTCCTCTGACCATTCAAGGCTTAAGGAAGCACAGCATGCGAATGTTACTTAGAGTACAATCACAGAGACCACTGTGGCTTAGGATATGTATATTTGGAATCTTACTCCTTTTTGAAGGACTGTGTTTCCGTTATTCTGGATTTCACTCCCATTTTGGGCCTTAAGCGGACAGGGGATCCGCTATTGCCTTCATAATCCTCTGAAAATGACGATGGGCAGCGCATTAGAGGCTCCTGAGTCCGCAGCCTGCGCCAAAACCAGTGATCCGGTACAAATAGCGGCTGCTGTGTCCTCCAAGTCTCTCTTTGTGTCTTTGTGCAGGGAGCAAAGCTCCAAAAAGAGCAGCATGAAGCTGCCTTTTGGTAAGCAGGTTCACATTTATGAGCTGTGC # Questionable array : NO Score: 9.22 # Score Detail : 1:0, 2:3, 3:3, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCTCCCCGTGCGGGAGCGTGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: R [5,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGCTCCCCGTGCGGGAGCGTGGATCGAAAC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-6.40,-5.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [55.0-78.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.78,0.64 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 6 6127206-6127709 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP016808.1 Paenibacillus sp. BIHB4019 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ==================================== ================== 6127206 33 100.0 36 ................................. CTTTGACATTTAGTGACAGTCAGATTAAGCGCGGTT 6127275 33 100.0 34 ................................. CTTCGAAGCATGGTATGAAAAGTTGTTCTCAATT 6127342 33 100.0 34 ................................. ATCTCTCCCCTTAGGTTTATATCCGCGGCTGCCG 6127409 33 100.0 34 ................................. ATGCTCGGACCAGATTAAACTTGTGATGTGCATG 6127476 33 97.0 34 ............A.................... CGAATATTTTTTCTGCCATCATAACCATCTCCTT 6127543 33 97.0 34 ............A.................... TTCCAAGTCAGCAAGCGTGCCGTCGAGCCCCAAT 6127610 33 97.0 34 ............A.................... AATCCTAGGCTGAAGAACTTACGGTCAACCGTTG 6127677 33 100.0 0 ................................. | ========== ====== ====== ====== ================================= ==================================== ================== 8 33 98.9 34 GTCGCACTCCGTGTGGAGTGCGTGGATTGAAAC # Left flank : CGCCCACTGCATATTGCATCGTCACGCTATTTTCACTCTCATTATGCCGCTGCTCCAATTGCCCACCCGCCCTTTCGCCTTTCCACTACAGCTAATTGCAAAAATTGTATATGTCCTCATAGCGCTCCAAGGTATTTATATCATCATATGTTCGGTGCGGGGCGGACATGTGTACAGGCTGAGAATGATAATATAGATGGTACAAGCAGTTAGAAGGGGAGGCTTTCTTTTGAAAGCAGGAGCGATAAAAACGTATTTATAAGAGTAATACATGTATATTTTCATTATAAAAAAGCTCTATCCTCCTTGGACTTATTTTGGTGCGAATGTGAAGCTCACATGAAAACCTCGGGGGATTCGCACCTCACAATTTGTCGAATAATGACGAAATCAAACTCTTTTCAAAAATGTCAAGTTTTTTCTTATCTTGTTTTGATATTGTTTCGTTGAAAAAAGAGTTAATTAATGCCATGATGGGATTAATAAGCGATATTTTCGCT # Right flank : CTCGTTTGCACGTACTTATCCTTTACCAAAGTCGCATTCTATGCGACTAAAGAAAATAAAAAAATTCCCAATAAAATACAACCACCTATTACTGATTTAATATAAGATGAACAGTACCTGCCCAAAACCGTAACAATCATGTAAATAGACCAAACGATGGGAGTGTCCATTATATGGGGATGATAGGAATCTATTTAGCCGTTTACAATGAGCAAATTGAACAAATTGCTCAAGGTGAGCTTTTGATGGAGGAAATGGCACCAGATGCTTTTGGAAAATTGGATATTGATAAAGCATGGCAGGCTATTCACTATGTGTTATGCGAAGAAATCGATAATGGCTCGCCGCCCATAGGCTATGTAGTGCCTATGCTGGACGATCAAGCGCTAGATTTTAGTGAGTTTGGCGCCTTCTATTTGAACCATAAGCAAGTCACGGAAGCTTCTATCGCCATCAGTGCCATTTCGGAGGCTGGTTTCAGAGAACGCTATTCGCTCGCC # Questionable array : NO Score: 9.21 # Score Detail : 1:0, 2:3, 3:3, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACTCCGTGTGGAGTGCGTGGATTGAAAC # Alternate repeat : GTCGCACTCCGTATGGAGTGCGTGGATTGAAAC # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: R [6,8] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-6.20,-6.00] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [68.3-65.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.5,0.37 Confidence: HIGH] # Array family : NA // Array 7 6849171-6848543 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP016808.1 Paenibacillus sp. BIHB4019 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ==================================== ================== 6849170 32 100.0 34 ................................ CTGCTGTTTGTGAGCTTAAAACCATCAATTTGCC 6849104 32 100.0 34 ................................ GTGCAATCATTTTGCGCGTCACATTTATGCTTGC 6849038 32 100.0 33 ................................ CCAGCGGTGGTTTGATATTCACGCCGCATCTTG 6848973 32 100.0 33 ................................ TTGTTGACGGGAAGGTTATTTATGTAAATCCGC 6848908 32 100.0 36 ................................ CGTCCAATATTGTGGCCGCCGCCAGGACCGTTCTGG 6848840 32 100.0 35 ................................ TTACACGCGGTTTGAAGCGTGCGGAACGAGCGTCA 6848773 32 100.0 35 ................................ AGAAAGAAGCTCAAATTCATCGTATAAGGCGCTAC 6848706 32 100.0 33 ................................ ATAATCGCATCATAAAAATCCCTGTGTTTATCA 6848641 32 96.9 35 ............A................... ACGTAACCTAAACTCTAAATCTTCTGCGAGCATGC 6848574 32 93.8 0 ..............A..........A...... | ========== ====== ====== ====== ================================ ==================================== ================== 10 32 99.1 34 GTCGCTCTCCGTGCGAGAGCGTGGATTGAAAC # Left flank : GGCTGCGACAGGTTGCGAAGTGCTGCCTAAATTACGGACAGCGTGTTCAAAACTCTGTTTTTGAATGCATTGTAGACCCTCTGCAATTCAAGCAATTGAAAGATCAGCTATCTAAGGAAATTAATGAAAATACAGATAGCCTGCGCTATTATTTGCTTGGTGCCAACTGGAAGAAGCGTGTGGAGCATGTAGGTGCCAAGGAAGGCTATGATCCTGAAGGGATTTTGATAGTGGATTAGTTGTTAAGATACACTTATTATGAAACGGGAAAGATTAGGTGTATTGATTTAGAACAATATATTTAAGTCGAAATTACTGAATAAATTTTTGCTGTGCGAACCTTAAGCACCCATGAATTTCCTAGGAGGTTCGCACACTGTATTTTATATGGCGGGTTGCAATAATAGTATTTATTTTAGCTCATTGATTAGACTGGGTAGATAAGGTTCGCGGAAAATATGTATTTTTCCCGCGCTAGTGAAGGCTTTTCATGGTATGCT # Right flank : GCAATTCAATGACTGACCTGATCAGCGGAAAAAATTTTAATTTAAAAAACTACAATAATTTACAAACGAAAAAATTGTTTTTAGTCATGGAGACTCATGAATTATTTTGTCGTTCAATAGTATACTTGATGTTGAAATGTATTCCAATATTTCAAATCTTATATTATTGAAAGGTGTGTTGTGATTTTGAAGAAGAGCAAGTTAGTTTTATTAGGTATGGTTATTATATTGTGTTTGATTTCTGCTATCCCTGTATCTGCCCAGTCGGTAACTAACGCCAACTCCAATGTCATTGCTCCTGCAGCCTATTGTCCGTCGTGTACGATGATTGGTCTTCCGTATCCTAAGAAAGATTATTCCCGCTCTGATTTTATTGGTGCAACTATTCAATATAACGGTTATACCTACCGTTTCTTGGAAATAGATGATAGCCTGAGCACTTCCACGCGTTGGTGGACAGTATGGTATAGATAATTTGATACCCATTTCTCTTGCAGTTT # Questionable array : NO Score: 9.21 # Score Detail : 1:0, 2:3, 3:3, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCTCTCCGTGCGAGAGCGTGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: F [7,6] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGCTCCCCGTGCGGGAGCGTGGATCGAAAC with 91% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-3.80,-7.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [73.3-58.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.64,9.78 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 8 6860954-6858192 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP016808.1 Paenibacillus sp. BIHB4019 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ==================================== ================== 6860953 32 100.0 34 ................................ TATTGACTACCATGGGTTAAATTGTCTATGATAG 6860887 32 100.0 35 ................................ AACAGTATATAGGGGTAATAGGATCGGGCAAAAGT 6860820 32 100.0 35 ................................ TGTGCTATCGCGGTTGTTGGCGTTGAAACGTATAG 6860753 32 100.0 35 ................................ GAGGAAAAATACGGCTAATACTAGCAAGAGAAACC 6860686 32 100.0 35 ................................ TGATTATAAACATTCTGCTGAGGCTGAGGCTGAGA 6860619 32 100.0 36 ................................ AAATTTAAACACATTCTTCAGCACAACACTGTTACG 6860551 32 100.0 35 ................................ CTAAGCTGCGTCGTAAATATTGGGACAAGCTGCTC 6860484 32 100.0 34 ................................ GTGGGCTCAAAAAGGCGGCGGCTTAAGGGGGCTT 6860418 32 100.0 34 ................................ AGTGAATTCGTCACTTTGACGTTTGCTCATGAAG 6860352 32 100.0 35 ................................ GTAACATGGTAGAGGGTGCGAAAAAGAAAAGTAAA 6860285 32 100.0 36 ................................ CCCTATGATGTTATATATCTATCATAGGCATGTTAG 6860217 32 100.0 34 ................................ TCATGAAATGTCTGCCAAAATCGCTAAAGAATTC 6860151 32 100.0 34 ................................ CGACATTAACACAACCCCTTGTCTCGTTTTATGC 6860085 32 100.0 34 ................................ GCGCAATCCTTGTTTGCGTTGACAACTTATGCTT 6860019 32 100.0 35 ................................ GTGGGCTCAAAAAGGCGGCGGCTTAAGGGGGCTTT 6859952 32 100.0 35 ................................ ATAATTATCAGAACAAAAACGCCAAACACGACCAT 6859885 32 100.0 34 ................................ ATACGGCGCATGACTTGGGCGCAGAAGTGGACGA 6859819 32 100.0 34 ................................ ATGCAGCATTTCGGGCTTGCTCCGTCTTCGCCTG 6859753 32 100.0 36 ................................ ACCGCGACGGGAGTAGAAGACCCGGACGACGTGAAG 6859685 32 100.0 35 ................................ AACGAAGCTATCTGAAAACCCCGTCAAATATACGC 6859618 32 100.0 34 ................................ CGGCAGATATAGCAGAGAAGCTTATTGAGGATGG 6859552 32 100.0 34 ................................ AGGTCGTTTACGAGAGCCTCTTCCACAGGCTCTT 6859486 32 100.0 36 ................................ TCGTCAATGTACTTCAACGTTCCGTCGAGCTCTCGC 6859418 32 100.0 34 ................................ CATGCTGGCTACCAAGCTGATGGGATTTCGGAGA 6859352 32 100.0 36 ................................ CGGTACCGGCTCCGATACGCAGGACAAAGGCGTGGG 6859284 32 100.0 35 ................................ CAGAGCAAATAAACGGTAAGCCAGTTGTGTCAATT 6859217 32 100.0 34 ................................ GCGAAGATGCTGGAAGATATCACGGCGGCTAGAG 6859151 32 100.0 34 ................................ ATTGCCGTTTATCTCTACATATCTACCTGGTATA 6859085 32 100.0 33 ................................ CGGTTTGGTTCTGCGCGACTGTACGCCAGTAGA 6859020 32 100.0 36 ................................ ATAAAATCCTAAAAATGTTGTAACAATCATTCCCAC 6858952 32 100.0 34 ................................ CTGCCTCTTGTTTTGGGAATCGTTAAATACTGGA 6858886 32 100.0 35 ................................ CACCTCACCAGCTGCCGCCATTTCCGCCATTGCAT 6858819 32 100.0 34 ................................ ATGCCGCTGTATCTTAACTGGCGTGGGCCGTTTG 6858753 32 100.0 36 ................................ GCTGCCAGTGCCGCCGTCTAGGCGAGCCCACCAAAT 6858685 32 100.0 33 ................................ ATGCTAGACCATATTTCTATGTTTAGCGATACG 6858620 32 100.0 35 ................................ ATAAAACGAGTATAGGCAAGCAGGCCGTCATCATT 6858553 32 100.0 33 ................................ TCTGGCGTGCTGCGCTGCGCACGCTGCGGAAAC 6858488 32 96.9 34 .......................A........ TCCAACTTGGCCGCCGCTTCCGCTGCCGTCGCTG 6858422 32 96.9 33 .......................A........ GAGCATGTACCCATTTCGCTGTATTTACTGCTA 6858357 32 100.0 36 ................................ ACGCCGATCTATATTTACATCCTGACGGGGGCTAGC 6858289 32 100.0 34 ................................ TGTCGCTTCAATTTTCACTATCGCTGCCGCTATC 6858223 32 93.8 0 ...........................C..T. | ========== ====== ====== ====== ================================ ==================================== ================== 42 32 99.7 35 GTCGCTCTCCGTGCGAGAGCGTGGATTGAAAC # Left flank : TTGCGCCGCTGCTGCCAAGCAGCGAGGCATTTGCAGGCAAGCTAGCTCCGCTCGTGGATCGGGTGTGCATAGACGATTATTTTATGGGTGATGGAAGCGGTGGTAAACGAACTATGCGACTTGGACTGGAGACACTGTATGCGCAGCTGGGAGCTGAGGAATGGAATGAGCCTTCGGCTTACGAGGCTGTTTATCGGCAGTTCCGTGAGGTTTTTGGGGAAGAGCAGCTTTTTATAAGTCAGGCGGGGTTTGAGCCTTGAGCGGGTGAGTGGAGTTTCGCAGGAAATGATTGTAAGTGGCAGGTTTGAATGCTAGGATAAAAGAGAAGTGTCGCGCGAACGTTAAGCCCCCATGAAAACCCCGGGAGTTTCGCACACTGCGCCAGATCAGGGAAAACTCGGATTTTTATTTCCATGGGCATTAGGAAATGGAGTTGAATGAAGAGGTTCGCGGATATATACCATTTTCCCCTTGCTGTGCAAGGCTTCATGAGATATGCT # Right flank : ACATGGGGGATGATGTAGGTGGTAGTGGCGGTGATATGTTGCTCTCAGTGCAAATGTTTTTTGAAAACGTAAGACATCTCCTAATGAACTATTCCATTGATATAGTGGCTTGATGTTTTTTCGTGCTTCTCTATATTAAAAATTCTTTTATGCGACCTGAGTTTGTTTTTATTCTTCCCACATGCATATCTCCTCAGACTTTTTCATATAATGTTAAGTCTTGATTTTTAGGAGGTGGTGATTATATGAAAACGTTTACAAATTTTAACGACAGTAAGATCGACGATAGAATTTCACGGCTGAGGTACAAGAACTCCCGATTATTCAGCTTTGGATTTTGGGCAATCAGATAGTTTTGTTTTAAACGATGTAAAAATGCAGTCACATTCAATAACATCTAACTATAGGTTTAATAATGCCCATTCTAAAACCAGATGTTTTTAGCTAAAAAGGCCGTAATCCGCCAGATAAGTGCTCTGTGGATTACGGCCTTTATTTTA # Questionable array : NO Score: 9.25 # Score Detail : 1:0, 2:3, 3:3, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCTCTCCGTGCGAGAGCGTGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: F [7,6] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGCTCCCCGTGCGGGAGCGTGGATCGAAAC with 91% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-3.80,-7.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [53.3-55.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,9.78 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //